Dsta010312.1
Basic Information
- Insect
- Drosophila stalkeri
- Gene Symbol
- retn
- Assembly
- GCA_035047405.1
- Location
- JAWNPR010000090.1:12736276-12765623[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-26 1e-22 80.4 0.0 2 89 296 381 295 381 0.96 2 2 0.99 1.9e+03 -0.6 0.7 8 47 539 581 509 593 0.66
Sequence Information
- Coding Sequence
- ATGGATTGCAGCGGCCGTTCAACTAACACTATTGAACGCGATTCCGATTTGGGTGATGATTTGTCCCACGGCGATCGAACGGATGACGAGATGCGCGACTGCGACTCTGTAGACGGTGAACATCATCAGCTGAGCGCCAAGGCGGCAATTGCAGCTCGACTCAGTCACACAGTCGCCGGCGGCGCTGGCCTCAACTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGccatcatcatcaactgCCGCCAAATCATCCGCTTAATGCTCTGGGCAGCTTCATGGGCATCGGCGGACTACACAGCATTCCAAATCTGCAGCACAGCGATGTGCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTGGGTCTCATGGAGCAGGACTATGCGGCGGCGGCACATGCAGCTGCCTTTGGGGCCAATATGCTGCCCACAACGATCAGTTCGGCTTTTCCGCTGGCCCACAATTCAGTggcagcggctgcggcagctgcaTCCTTTGGCCATGCGGCCAATGCGGCGGCCAGCAATGGCGCCAGTTACAATggagGTGGCACAGGTGGTGGCACGGCCAATgcaactggcaacaacaacagtaacaacaatggcaacaacaacaacaacaataataataacaacaacaacaatagcaacaacaacaacaacaataacaatgccgGCAATGGTCATCCCTTTTCGTTTGCATCACCGACAGCGCCAAGCGCCAAAGAAGCGCGTCATTTTGCAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTCGatgatttgttttcatttatgcaAAAGCGCGGCACACCTATCAATCGGCTGCCCATAATGGCTAAATCGGTGCTGGatctatatgaattatataatctGGTTATAGCACGCGGCGGCCTCGTCGATGTCATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCCGCATTCACGCTGCGCACACAATACATGAAGTATTTGTACCCATACGAGTGCGAGAAGAAGAATCTGAGCACACCGGCCGAGCTGCAGGCGGCCATCGATGGCAATCGGCGCGAAGGACGTCGCTCCAGCTATGGCCAATATGAGGCAATGCACAATCAGATGCCGTTGACACCCATTTCGCGACCTCCGCTACCTGGTGGCATGCAACAGATGTCGCCCTTGGCTCTGGTCACACACGCCGCGGCGGCCAACAATCAGCAGGcgcaggcagcggcagcagccgccgcagcgCACCGCCGACTGATGGGCGGACCGGCGTTTGGCCAGATGCCCAATCTGATGACGCAGGAGATTGAGAATCGCATGATGGAATATCTGCAGTTAATCCAGGCCAAGAAGGAGCAGAATGCTGGCCCAGTGCTTGCAGCCACACACaatcatcaacagcagcagcagcagcagcagcagcaacagcagcaacaacagcagcaacagcagcagcagcaacagcaacaacaatcgctgcatcatcaccagcagcagcgccagcgctCCCAGAGTCCAGAGCTGAGCACGCGCGATGCGCTGAGTGCACAAGTGGCGCTTTGGCACATGTATCACAATAGCAGTCCGAATGGTTCGGCGCACACCTCACCACAGCAGCGCGAAGCCTTGAACCTATCCGATTCGCCGCCAACTCTGAATCTGAATCACATAAAACGTGAACGGGAACGCGATCCAACGCCAGAGCCAGCGGATCAGGATGAGACACCACATCAGCCACCGCCAGCGAAACGTGTGGGCAGTGGCCTGATGCCACCCGGTTTTCCCGCTAACTTCTATTTGAATCCACACAATATGGCCGCTGTGGCAGTCGCCGCCGGCTTCCATCACCAGGCGAACAGCAATAGCCATCATCATctgcatcatcagcagcagcaccagcagcagcagcagcaacagttgcagctgcagcaacaggaTGCCGCGTCCGATGGCGAGCCAGAGGATGACTATGGCAATGCTGAGCACAATACCACCGGCAATTCCTCGTCCATGCACGATGACAGCGAGGCGCAGCAGCTGAACGGTCATCATGACCATCTCGACCATCAtcaccaccatcatcatcatcatcatcagaatCATCTGGATAAGTCAGATGATTCGGCCATTGAGAACTCACCCAGCACTTCCACTACGGCATCAGCGTCGGGCGGTCATCGTCACAGCTCGCCTGTGTccacgaagaagaagagcgcAAGTGGCAAGGCACAGTCCAGTTCCAAGGACACACAGCACGACAGCTGCACAGCCGGCAcaggcggcagcaacagcagcagcaacagcaacagcaacaacaaaggcgtCAGCGGCGTCGGGAGCGGAATCGGTGGCGGCGTCAAACTAAATCCCCTCGAGACACTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGCGCAAATGGCGAGCAGCAGTTGATTGTCAATCTGGCGCTGAATGGCATTAAGTACTCGGGCGTGCTGGTGGCCAATGCGggcggcgacgacgacgacgacgacgacgacggcgacgacgacgatgtgGATGATGACGTCGCCAATGCCGACAACGACATCAGCACCAACCCCAATAGAGACACCAAcattgctgcaattgcaacgcCAACTGCAGTCATAGAGGCAGGCGGCGCCAGCGAGGAGCCAGCGCCTGAGGAGGCCAACGAGAGCGGCCAGGAAGTTGGCCCGAATGGGGCAAacgacgaggaggaggagacgCAGCCAACTGAAGACATTGTCAATGCCAGCTTGGCTGggggtgtgggcgtgggcgtagGTTtaggtgtgggtgtgggtgtgggcgtggctgtggggTCGCTGTTAAAAGATGCTGTAGTAAATTCATAG
- Protein Sequence
- MDCSGRSTNTIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLAHNSVAAAAAAASFGHAANAAASNGASYNGGGTGGGTANATGNNNSNNNGNNNNNNNNNNNNNSNNNNNNNNAGNGHPFSFASPTAPSAKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLMTQEIENRMMEYLQLIQAKKEQNAGPVLAATHNHQQQQQQQQQQQQQQQQQQQQQQQQQQSLHHHQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPNGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPADQDETPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAVAAGFHHQANSNSHHHLHHQQQHQQQQQQQLQLQQQDAASDGEPEDDYGNAEHNTTGNSSSMHDDSEAQQLNGHHDHLDHHHHHHHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKSASGKAQSSSKDTQHDSCTAGTGGSNSSSNSNSNNKGVSGVGSGIGGGVKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLALNGIKYSGVLVANAGGDDDDDDDDGDDDDVDDDVANADNDISTNPNRDTNIAAIATPTAVIEAGGASEEPAPEEANESGQEVGPNGANDEEEETQPTEDIVNASLAGGVGVGVGLGVGVGVGVAVGSLLKDAVVNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502302;
- 90% Identity
- iTF_00493426;
- 80% Identity
- -