Hhis019146.2
Basic Information
- Insect
- Hirtodrosophila histrioides
- Gene Symbol
- retn
- Assembly
- GCA_037075165.1
- Location
- JBAMCL010000823.1:34157-57617[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-26 1.1e-22 80.5 0.0 2 89 349 434 348 434 0.96 2 2 3.9 8.1e+03 -2.5 0.2 21 39 596 619 567 633 0.52
Sequence Information
- Coding Sequence
- ATGTGCAATGTTATGGCCACAAAAGAGGATGGAGGATGGAGGATCGAGGTGAACACGGGTACGGAGACGGAGATGAAGGTGGAGGAGGAGGTGGAAGTGGAGGCTGCTGCCACTAAACTGAGGCAACACTGGAAGAGCAAGAGCGAGACGTTACCATTTCATTATGCGCGTCCGCGTTCGAGCCAATCCCACGGCGATCGTACGGATGACGAGATGCGCGACTGCGACTCTGTGGACGGGGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCAGCCCGTCTCAGTCACACAGTCGCCGGCGGCGTGGGCCTCAACTTTGCCAGTCCGGAGCAGCAAACAGATCTGCCACTCAGCCATCATCACCAGCTGCCGCCAAATCATCCGCTTAATGCTCTGGGCAGCTTCATGGGCATCGGCGGTCTACACAGCATTCCAAATCTGCAGCACAGTGATGTCCTGGAGAAGCTTAAGATGCAAGTGCGAGACATGAAAGTTGGTCTCATGGAGCAGGATTATGCAGCAGCGGCGCATGCGGCCGCATTTGGCGCCAACATGCTGCCCACCACGATCAGCTCGGCCTTTCCGCTGCCGCACAACACGGTGGCAGCGGCCGCGGCAGCTGCAACCTTTGGCCATGCAACAAACGCGCCCGTGCCGCCAGCCAGCAATGGCGCCAGTTACAATGGAGGCTCTGGTGTTGGGGCAGGCGCAGGAACGGGTGCTGGAGCGGCGGCAGCTGTGGCTAGTAACAATGGTggagctggaggaggaggTGGAGGAGGCGGAGCAgtggcaggagcaggagctgcggccagtggcaacaacagcaacaacaacaatgccggCAATGGTCATCCCTTCTCATTTGCATCACCGACAGCGCCGAGCGCCAAAGAAGCGCGCCACTTTACAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCCCAACAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAACGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGAGGCACGCCCATCAATCGCCTGCCCATTATGGCCAAGTCAGTGCTGGATCTGTATGAGCTATATAATCTGGTGATAGCACGTGGCGGCCTTGTCGATGTTATCAACAAAAAGCTATGGCAGGAGATAATCAAGGGATTGCATCTGCCCTCGAGCATCACCAGTGCCGCATTCACCCTGCGCACCCAATACATGAAGTATTTGTACCCGTACGAGTGCGAGAAGAAGAACCTCAGCACACCGGCCGAGCTGCAGGCGGCCATTGATGGCAATCGCCGCGAAGGACGTCGATCCAGCTATGGCCAATACGAGGCTATGCACAATCAGATGCCACTGACGCCCATTTCACGGCCACCGCTGCCAGGTGGCATGCAACAAATGTCGCCACTGGCGCTGGTCACACACGCCGCGGCGGCCAATAATCAGCAGGCgcaagcagcggcagcggccgcAGCAGCGCATCGCCGCCTAATGCAGGGCGGTCCGGCCTTTGGCCAGATGCCAAGTCTGATGACACAGGAGCTTGAGAATCGCATGATGGAATATCTGCAGCTGATACAGGCCAAGAAGGAACAAAGTGCGCCTGTGCTAGGCGCCACACATCcccaccagcaacagcagcagcagcaacagtcgctGCACCatcaccaacagcagcagcaacaacaacagcagcagcaacagcagcagcgccaacgcTCACAGAGTCCCGAGCTGAGCACGCGGGATGCGCTGAGTGCGCAGGTTGCACTGTGGCATATGTACCACAACAGCAGTCCAACCGGCTCGGCGCACACCTCACCACAGCAACGCGAAGCCTTGAACCTCTCCGACTCGCCGCCGAGTATCAACCTAAACCACATAAAACGCGAGCGGGAACGTGACCCAACGCCTGAGCCGGCGGATCATGAGGAGACACCGCATCAGCCGCCGCCGGCCAAACGTGTGGGCAGCGGTCTGATGCCGCCCGGTTTTCCTGCTAACTTTTATTTGAATCCACACAATATggcggctgtggctgctgccgcGGGCTTTCATCATCAGGCGAACAGCGGcgctcatcatcatcagcagcagcagcaacaggatgCGGCGTCGGAGGGCGAGCCGGAGGATGAGTATGGCAATGCGGAGCACAATACCACCGGCAATTCGTCCTCCATGCACGACGATAGTGAGCCACAGCAGCTGAATggacaccaccaccaccaccatcatcatcaccatcagaATCATCTGGACAAATCGGATGATTCGGCAATTGAGAACTCGCCCAGCACTTCCACaacggcatcggcatcgggcGGCCATCGTCACAGCTCGCCGGTTTCCACCAAAAAGAAGAGCGTCGGCAGCAAGACACAGTCCAGCTCCAAGGATACGCAGCAGGACAATTGTTCAGGCAGCAACGCCAAGCTGAATCCCCTCGAGACTCTCAGCCTGTTGTCAGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGCGCAAATGGCGAACCGCAGTTGATTGTCAACCTCGAGCTGAATGGCATTAAGTACTCTGGTGTGCTGGTGGCCAATGCAGCCAGGCCAGACCAGAGCGAGGACACCGACACGCCAGCTGCAGCCAGGACCGAGGAGCCAGCGATTGCAGAGGCCAGCAATGCGGTCAAGCACGAAAACAGCCAGGAAGTCAGCCAGAACGAGGCAATCGAAGAGGAAGCGGAGCAGCCCATGGATGACATTGTGAATGGAGCGAGTGggggtggtgttggtggtgttggcagtggcagtgggaCTGTGGGCGTATCTATGCTAAAAGATGCTGTGGTCAGTTCGTAG
- Protein Sequence
- MCNVMATKEDGGWRIEVNTGTETEMKVEEEVEVEAAATKLRQHWKSKSETLPFHYARPRSSQSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGVGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLPHNTVAAAAAAATFGHATNAPVPPASNGASYNGGSGVGAGAGTGAGAAAAVASNNGGAGGGGGGGGAVAGAGAAASGNNSNNNNAGNGHPFSFASPTAPSAKEARHFTANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMQGGPAFGQMPSLMTQELENRMMEYLQLIQAKKEQSAPVLGATHPHQQQQQQQQSLHHHQQQQQQQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPSINLNHIKRERERDPTPEPADHEETPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSGAHHHQQQQQQDAASEGEPEDEYGNAEHNTTGNSSSMHDDSEPQQLNGHHHHHHHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKSVGSKTQSSSKDTQQDNCSGSNAKLNPLETLSLLSGMQFQVARNGTGANGEPQLIVNLELNGIKYSGVLVANAARPDQSEDTDTPAAARTEEPAIAEASNAVKHENSQEVSQNEAIEEEAEQPMDDIVNGASGGGVGGVGSGSGTVGVSMLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502302;
- 90% Identity
- iTF_00803382;
- 80% Identity
- -