Dmet007873.1
Basic Information
- Insect
- Drosophila mettleri
- Gene Symbol
- retn
- Assembly
- GCA_035047625.1
- Location
- JAWNPI010000085.1:2018815-2044059[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-26 8.9e-23 80.5 0.0 2 89 309 394 308 394 0.96 2 2 0.85 1.3e+03 -0.2 0.1 11 47 546 586 534 598 0.63
Sequence Information
- Coding Sequence
- ATGCAACTCCGAGTGCATCCGACTATGGATTGCAGCGGCCgttcaaataatattgaacGCGACTCCGATTTGGGTGACGATTTGTCCCACGGCGATCGAACGGATGACGAGATGCGCGACTGCGACTCCGTTGACGGTGAGCATCATCAGCTGAGCGCCAAGGCGGCAATTGCGGCGCGACTCAGTCACACAGTCGCCGGCGGCGCTGGGCTCAACTTTGCCAGTCCAGAGCAGCAAACAGATCTGCCACTCAGCCACCATCACCAGCTGCCGCCGAACCATCCGCTTAACGCACTGGGCAGCTTCATGGGCATCGGCGGCCTACACAGCATTCCAAATCTGCAGCACAGCGATGTGCTCGAGAAGCTCAAGATGCAAGTGCGCGACATGAAAGTGGGGCTCATGGAACAGGACTATGCGGCGGCGGCACATGCGGCCGCCTTTGGGGCCAATATGCTGCCCACAACGATCAGCTCGGCGTTTCCGCTGGCCCACAATtcggtggcagcggcagcggcagccgcatcCTTTGGCCATGCAGCAGCGGGCAGCAATGGCGCCAGCTACAATGGAGGCGCCGCTATCGTCGGTGGAGGAGGAgtaggaggaggagcagcagtcgcggcagcagctggaaataataataataatgcaggTGGCACAGGTGGAGGCAACACTACCAATGCGCCAGGcactgccagcagcaacaacaacaacaacaatgctggCAATGGGCATCCATTTTCGTTTGCATCGCCGACAGCGCCAAGCGCCAAAGAAGCGCGTCATTTTGCAGCTAATTCCGCATCAAATTCATCGACGTCCAGCGAGGCATCCAATTCATCGCAGCAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATCAATGATGATCCCAAGCGCAAGGAGTTTCTGGATGATTTGTTTTCGTTTATGCAAAAGCGCGGCACACCCATCAATCGGCTGCCCATAATGGCCAAATCGGTGCTGGATCTGTATGAGCTGTACAATCTGGTGATAGCACGCGGCGGCCTCGTCGACGTTATCAACAAGAAGCTCTGGCAGGAGATTATCAAGGGACTGCATCTGCCATCGAGCATCACCAGTGCCGCCTTCACGCTGCGCACCCAGTACATGAAGTATTTGTACCCTTACGAGTGCGAGAAGAAGAACCTGAGCACACCGGCCGAGCTGCAGGCGGCCATCGATGGCAATCGACGCGAAGGACGTCGCTCCAGCTACGGCCAATACGAGGCGATGCACAATCAGATGCCACTGACACCCATTTCGCGACCGCAGCTACCTGGTGGCATGCAACAGATGTCGCCGTTGGCCTTGGTCACACACGCCGCGGCGGCCAACAATCAGCAGGcgcaggcagcggcagcggccgcCGCGGCGCACCGCCGACTGATTGGCGGCCCGGCGTTTGGCCAGATGCCCAATCTGGTGACGCAGGAGATCGAGAATCGCATGATGGAGTATCTGCAGCTGATACAGGCCAAGAAGGAGCAGAGCGCTGCTCCCGTGCTCGCTGCCACACACaatcaccagcagcagcagcagcagcagcaacagcagcatcaacagcagcagcagcagcaagcgctgcatcaccaccagcagcagcgccagcgctCCCAGAGCCCAGAGCTGAGCACGCGCGATGCGCTGAGTGCACAGGTGGCGCTCTGGCATATGTATCACAACAGCAGTCCGAACGGCTCGGCGCACACCTCACCACAGCAACGCGAAGCGTTGAACCTGTCCGATTCGCCGCCAACTCTGAATCTGAATCACATAAAACGTGAACGCGAGCGCGATCCCACGCCGGAGCCGACGGATCACGATGAGACACCGCACCAGCCGCCACCAGCAAAGCGCCTCGGCAGCGGTCTGATGCCACCCGGTTTTCCCGCTAACTTCTATTTGAATCCACACAACAtggctgctgtggcagccGCCGCCGGCTTCCATCACcaggcaaacagcaacagccatcATCATctgcaccagcagcaccagcaccagcagcaacaggacgCAGTGTCCGACGGCGAGCCAGAGGATGACTATGGCAACGCTGAGCACAATACCACCGGCAATTCCTCGTCCATGCACGATGACAgcgagccgcagcagctgaacGGTCATCACGACGACCACGAGCACGACCACGACCAccatcatcttcatcatcaccatcatcagaATCATCTGGATAAGTCAGACGACTCGGCCATTGAGAACTCGCCCAGCACTTCGACGACGGCGTCAGCATCGGGCGGCCATCGTCACAGTTCGCCGGTGTCCACCAAGAAGAAGAGTGGAGCCAGCAAGGCGCAGTCCAGCAGCAAGGACACGCAGCACGACAACTGCACAgtcggcggtggcagcggcggcagcagcagcgcggcCATCGGCGGGGCAGCCGGCGCCAAGCTGAATCCCCTCGAGACACTCAGCCTGCTGTCGGGCATGCAGTTTCAAGTGGCACGCAATGGCACCGGCCCAAATGGCGAACAGCAGTTGATTGTCAATCTGGAGCTGAATGGCATTAAGTACTCGGGCGTGCTGGTGGCCAATGCAGTTGGGTTAGAGCGTCACAAGgccgacgccgacgctgaCGGCGACGCCaatgccgacgccgacgccaacCCAGACACCGCTGACACAGTGACGCCCGCTGCAGCCACTGGCGGAGCCGAGGAGCCAGCGCTCGATGAGGCGACGGCACACGAGAGCGGCCAGCATGAGGCAAACGatgaggaggagcagcagcagcagcagcagcagcctacAGAAGACATTGCCAGTGGAGGCATGGGTGTGGGCTTaggtgtgggcgtgggcgtgggcgtagGTGTGGGTGTGGGGTCGCTGTTACAAGATGCTGTGGCCAGTTCGTAA
- Protein Sequence
- MQLRVHPTMDCSGRSNNIERDSDLGDDLSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGAGLNFASPEQQTDLPLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLAHNSVAAAAAAASFGHAAAGSNGASYNGGAAIVGGGGVGGGAAVAAAAGNNNNNAGGTGGGNTTNAPGTASSNNNNNNAGNGHPFSFASPTAPSAKEARHFAANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPQLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLIGGPAFGQMPNLVTQEIENRMMEYLQLIQAKKEQSAAPVLAATHNHQQQQQQQQQQHQQQQQQQALHHHQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPNGSAHTSPQQREALNLSDSPPTLNLNHIKRERERDPTPEPTDHDETPHQPPPAKRLGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQANSNSHHHLHQQHQHQQQQDAVSDGEPEDDYGNAEHNTTGNSSSMHDDSEPQQLNGHHDDHEHDHDHHHLHHHHHQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKSGASKAQSSSKDTQHDNCTVGGGSGGSSSAAIGGAAGAKLNPLETLSLLSGMQFQVARNGTGPNGEQQLIVNLELNGIKYSGVLVANAVGLERHKADADADGDANADADANPDTADTVTPAAATGGAEEPALDEATAHESGQHEANDEEEQQQQQQQPTEDIASGGMGVGLGVGVGVGVGVGVGSLLQDAVASS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00502302;
- 90% Identity
- -
- 80% Identity
- -