Zalb011434.1
Basic Information
- Insect
- Zele albiditarsus
- Gene Symbol
- bab2
- Assembly
- GCA_958496275.1
- Location
- OY292414.1:7547739-7566952[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1e-12 1.2e-09 37.6 0.0 1 39 388 427 388 431 0.90 2 4 3.1e-12 3.8e-09 36.0 0.1 2 39 443 480 442 483 0.94 3 4 1.1e-18 1.4e-15 56.6 0.0 2 45 498 542 497 542 0.97 4 4 1.3e-18 1.6e-15 56.5 0.1 1 42 549 591 549 592 0.97
Sequence Information
- Coding Sequence
- atggaGCGAGGACATTATTGGGGTGTTCACTACAGcgGAGGGATGGCCGGGCAGCATTACTGCCTGCGCTGGAACAATTACCAGTCGAACATGACGTCCGTGTTTCATCAGCTGTTGCAAACGGAGGCCTTCGTGGACGTCACCCTGGCTTGCAATGAGGCTTCATTAAAGGCACACAAGGTCGTATTGTCCGCCTGCAGTTCATACTTCAAAAAGCTTCTGCTTTCAAATCCATGTAAACATCCAACGATAATCATGCCGCAGGATGTTTGCTTCAATGATCTCAAGTTCATCATTGAATTCGTCTACAAGGGCGAAATTGACGTGTCACAGGCGGAACTTCAGTCGCTGTTGAAAACGGCGGATCAACTGAAAATTAAGGGCCTGTGTGAGGTGCCGGAGAGCAGAGAGGCACCGGCAACAGTGAGCTTGAGCTCACCGCCAAGGGAAACGGGCGCGGCAAGATTTAACTATACCAAACTGAAGAGACATCATCCAAAGTATAAACGACAGAGAACGACATTTGAGCCGAGGGCGACGAGCACAGATTCACGGCATTACGACAAATACAAAGAGGAGGATAATAACGAGGGTGGTGGTGGCTTTGGCCGTGAAAACGACAAGGAGAATCATCGGGGTGAGTGGCAGACGGAGGATGAAGAGTGCGGCGACGCAGCAGTAGTCCTGGAATCCTGCCAACGCGACAGCAACAACGGTAACGGCACAAACAACAATAACGgtgACATGTTCTGTCACACAGGCCTAGGTCATTACGGTCATCATCCAGATCCTGGGGAAGTAGATCTGCCGCCTGAGACACAACCAACGCCACCGAGTGCTACCCTTGTTGGGACGACTATTACTCATTTGAGAGATACGGATCATCACTCGTcagaCATTCAAAATTGTGACAGCGTGAAGATTAAATTTGAAACACTACACACGATGGATTCGTCAGATACAATTGACATAGACAGTCATATGTCAGACCGAGCAAGCGTGAGCTCGAAACACGGCGCGGAGGGTGAcaacatgatgatgataacaCCTGAATTATTGGGACTGATGCCCTCAGGGAGTTCGGTACATTCGGATTCGGGTGACAATAATTCACGAGGTCATTCGGGTGGCTCGGGACATCATCATGGTTCTAAATCGTGGACGCAAGAGGATATGGACGCAGCATTGGAAGCGCTCAGGAACCATGACATGAGTTTGACAAAAGCGTCGGCGACGTTTGGTATACCATCCACGACACTTTGGCAACGGGCACATCGATTAGGCATTGACACTCCAAAAAAGGACGGACCAACAAAATCGTGGAGCGATGAAAGTTTAAATAATGCCTTAGAAGCATTGCGAACCGGTACTATATCCGCAAATAAAGCGTCAAAAGCATTTGGAATACCATCAAGCACACTGTATAAAATTGCTAGGCGAGAAGGCATCCGATTAGCAGCGCCATTTAATGCAAGTCCTACAACATGGTCACCTGCTGATCTTGACAGAGCACTGGAAGCAATAAGATCGGGACAAACATCAGTGCAAAGAGCATCAACTGAATTTGGTATTCCTACCGGAACACTTTATGGAAGATGTAAAAGAGAAGGTATTGAATTGAGTAGGAGCAATCCAACTCCTTGGAGTGAAGACGCAATGACTGAAGCATTGGAGGCTGTTAGATTGGGCCACATGAGTATTAATCAGGCAGCGATTCATTATAATCTACCGTACTCATCGCTTTACGGACGATTTAAACGTGGTAAATATGAAGAACCAGTTGTCGCAGAATTATCACAGGACGGCACAAATCcacattttcatcaaaatcatCAGAGTCCACATCAAAATCATTCATCACCACTTCCCGATCAAATGCCGTATCAGGGTAGCTGA
- Protein Sequence
- MERGHYWGVHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFKKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCEVPESREAPATVSLSSPPRETGAARFNYTKLKRHHPKYKRQRTTFEPRATSTDSRHYDKYKEEDNNEGGGGFGRENDKENHRGEWQTEDEECGDAAVVLESCQRDSNNGNGTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDTDHHSSDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHGAEGDNMMMITPELLGLMPSGSSVHSDSGDNNSRGHSGGSGHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVAELSQDGTNPHFHQNHQSPHQNHSSPLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_01001992; iTF_01000457; iTF_01000689; iTF_00996946; iTF_01001170; iTF_01560563; iTF_01002196; iTF_01001494; iTF_00996250; iTF_01003650; iTF_01005964; iTF_01003442; iTF_00317383; iTF_00316904; iTF_00316687; iTF_00317556; iTF_01004152; iTF_01004990; iTF_00397190; iTF_00397432; iTF_00397978; iTF_00398208; iTF_00059366; iTF_00828897; iTF_00266371; iTF_00829635; iTF_01056709; iTF_01129253; iTF_00414214; iTF_01364550; iTF_00059559; iTF_00263623; iTF_00058601; iTF_00262570; iTF_01057772; iTF_01055885; iTF_00721166; iTF_01056174; iTF_01057552; iTF_00057841; iTF_00343090; iTF_00439381; iTF_00828693; iTF_00265590; iTF_00905334; iTF_01057014; iTF_00652600; iTF_00829401; iTF_00263354; iTF_00439610; iTF_01497312; iTF_01508775; iTF_00840968; iTF_00798699; iTF_00459660; iTF_00841204; iTF_00459897; iTF_00798489; iTF_01100498; iTF_01101235; iTF_01103458; iTF_00629013; iTF_00050719; iTF_00451846; iTF_00452033; iTF_00048074; iTF_00047880; iTF_01379123; iTF_01379400; iTF_00046871; iTF_00047244; iTF_01207263; iTF_01207477; iTF_00046048; iTF_00046318;
- 80% Identity
- iTF_01560563;