Basic Information

Insect: Microctonus brassicae
Gene Symbol: bab2
Assembly: GCA_940306215.1
Location: OW675808.1:4877105-4895183[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.7e-12 1.4e-09 37.6 0.0 1 39 388 427 388 431 0.90

2 4 5.1e-12 4.4e-09 36.0 0.1 2 39 443 480 442 483 0.94

3 4 1.9e-18 1.6e-15 56.6 0.0 2 45 498 542 497 542 0.97

4 4 2.1e-18 1.8e-15 56.5 0.1 1 42 549 591 549 592 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.7e-12	1.4e-09	37.6	0.0	1	39	388	427	388	431	0.90
2	4	5.1e-12	4.4e-09	36.0	0.1	2	39	443	480	442	483	0.94
3	4	1.9e-18	1.6e-15	56.6	0.0	2	45	498	542	497	542	0.97
4	4	2.1e-18	1.8e-15	56.5	0.1	1	42	549	591	549	592	0.97

Sequence Information

Coding Sequence: atgGATTCGGCGCATTATTGGGGTGTTCATTACAGcggAGGGATGGCCGGGCAGCATTACTGCCTGCGCTGGAACAATTACCAGTCGAACATGACGTCTGTGTTTCATCAGCTGTTGCAAACTGAGGCCTTCGTGGACGTCACCCTGGCTTGCAATGAGGCATCATTAAAGGCGCACAAGGTTGTATTGTCCGCTTGCAGTTCATATTTCAAAAAGCTCCTGCTTTCAAATCCATGTAAACATCCAACAATTATCATGCCGCAGGATGTTTGCTTCAATGATCTCAAGTTCATCATTGAATTTGTCTACAAGGGCGAAATTGACGTGTCACAAGCGGAACTTCAGTCGCTGTTGAAAACGGCGGATCAACTGAAAATAAAGGGCCTGTGTGAGGTGCCGGAGAGTAGAGAGGCACCGGCAACAGTGAGCTTGAGCTCACCGCCAAGGGAAACGGGCGCGGCAAGATTTAACTATACCAAACTGAAGAGACATCATCCAAAGTATAAACGACAGAGAACGACATTTGAGCCGAGGGCAACAAGCACAGATTCACGGCATTACGACAAGTACAAAGAGGAGGATAATAACGAGGGTGGTGGTGGCTTTGGCCGTGAAAACGACAAGGAGAATCATCGGGGTGAGTGGCAGACGGAGGATGAAGAGTGTGGCGACGCAGCAGTAGTCCTGGAATCCTGCCAACGCGACAGCAACAACGGTAACGGCACAAACAACAATAACGgtGACATGTTCTGTCACACAGGCCTAGGTCATTACGGTCATCATCCAGATCCTGGAGAAGTAGATCTGCCGCCTGAGACACAACCAACACCACCGAGTGCTACCCTGGTTGGCACAACAATCACTCATTTAAGAGATACCGATCATCATTCATCAgATATCCAAAATTGTGACAGTGTAAAGATTAAATTCGAAACACTGCACACGATGGATTCGTCAGATACAATTGACATAGATAGTCACATGTCAGATCGGGCAAGCGTGAGTTCGAAACATGGTGCCGAGGGTGacaatatgatgatgataacgCCTGAATTATTGGGGCTCATGCCTTCTGGGAGTTCAGTGCACTCGGATTCGGGCGACAATAATTCACGAGGTCATTCGGGTGGCTCTGGACATCATCATGGCTCAAAATCGTGGACGCAAGAGGATATGGATGCAGCATTGGAGGCGCTCAGGAACCATGACATGAGTTTAACAAAAGCATCGGCGACGTTTGGAATACCATCAACGACTCTCTGGCAACGTGCACATCGATTGGGCATTGACACCCCAAAAAAGGACGGACCAACGAAATCGTGGAGTGATGAAAGTTTAAATAATGCCTTGGAGGCATTACGGACCGGGACAATATCCGCAAATAAAGCCTCGAAGGCATTTGGTATACCATCAAGCACATTGTATAAAATTGCTAGGCGAGAGGGCATTCGATTAGCGGCCCCATTCAACGCCAGTCCTACCACATGGTCACCCGCTGATCTTGACAGAGCACTTGAGGCAATAAGATCAGGACAAACATCAGTGCAAAGGGCATCAACAGAATTTGGTATACCTACGGGAACACTTTATGGTAGATGTAAAAGAGAGGGCATTGAATTGAGTAGGAGTAATCCAACTCCTTGGAGTGAAGACGCGATGACTGAAGCATTGGAAGCTGTTAGatTGGGACACATGAGTATTAATCAAGCAGcgattcattataatttaccGTACTCATCGCTTTATGGACGATTTAAACGTGGAAAGTATGAGGAGCCAGTTGTCGCTGAATTATCTCAAGACGGTACAAATCcacattttcatcaaaatcatcaAAGTCCACATCAAAATCATTCATCACCACTTCCCGATCAAATGCCCTATCAGGGTAGCTGA
Protein Sequence: MDSAHYWGVHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFKKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCEVPESREAPATVSLSSPPRETGAARFNYTKLKRHHPKYKRQRTTFEPRATSTDSRHYDKYKEEDNNEGGGGFGRENDKENHRGEWQTEDEECGDAAVVLESCQRDSNNGNGTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDTDHHSSDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHGAEGDNMMMITPELLGLMPSGSSVHSDSGDNNSRGHSGGSGHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVAELSQDGTNPHFHQNHQSPHQNHSSPLPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_01560354;
80% Identity: iTF_01001494;