Basic Information

Insect: Campoplex nolae
Gene Symbol: -
Assembly: GCA_037893425.1
Location: JBBLXU010002665.1:493143-499342[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 8.1e-13 1.1e-09 37.9 0.0 1 39 283 322 283 326 0.90

2 4 2.5e-12 3.2e-09 36.4 0.1 2 39 338 375 337 378 0.94

3 4 9e-19 1.2e-15 57.0 0.0 2 45 393 437 392 437 0.97

4 4 1.1e-18 1.4e-15 56.7 0.0 1 42 444 486 444 487 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	8.1e-13	1.1e-09	37.9	0.0	1	39	283	322	283	326	0.90
2	4	2.5e-12	3.2e-09	36.4	0.1	2	39	338	375	337	378	0.94
3	4	9e-19	1.2e-15	57.0	0.0	2	45	393	437	392	437	0.97
4	4	1.1e-18	1.4e-15	56.7	0.0	1	42	444	486	444	487	0.97

Sequence Information

Coding Sequence: ATGGAAAGTTGGAATGATCAATCGGATATCtcgTTACTGAAAACGGCCGATCAATTGAAGATCAAGGGCCTCTGCGAAGTACCGGAAAGCAGAGAAGGTCCACCCTCTGTCAGCCTGAGCTCACCACCGCCCCGTGATTCTACGGCAACGAGGCTCAACTACACGAAATTAAAGAGGCATCATCCCCGTTATAAGAGACAAAGAACGAGCTTCGAGCCGCGAGAGACCAGTGCGGATTCACGTAACTACGACAAGTACAAAGAGGAGGAACACAATATCGAAGGCCTCGGCCGTGACAACAACAAAGAGaaTCACAGAGGTGACTGGCAGACGGAGGATGAGGAGTGCGGAGCGGATGCAGCATCAGTAGTCTTGGAATCCTGTCAACGTGACAGCAACAACGGTAACGGTACAAACAACAATAACGGTGACATGTTCTGTCACACAGGTCTAGGTCATTACGGTCATCATCCCGATCCTGGTGAGGTAGACTTACCTCCGGAGACACAACCAACACCACCAAGCGCTACTCTCGTCGGTACCACGATAACGCATCTCCGCGATACCGATCATCACTCTACAGatATACAAAATTGCGACAGCGTTAAAATAAAGTTCGAAACTCTGCACACGATGGATTCGTCCGACACGATCGATATCGACAGCCACATGTCCGATCGCGCCAGTGTCAGCTCGAAACACGCCGCTGATAATGACAACATGATGATGATAACACCGGAACTTTTGGGCTTAATGCCATCCGGTAGCTCGGTACATTCGGACTCGGGTGAAAACAATTCACGAGGCGGTGGATCGGGCTCACATCATCACGGTTCCAAATCTTGGACTCAGGAAGACATGGACGCTGCGCTTGAGGCACTCAGAAATCATGACATGAGCCTCACGAAAGCATCAGCAACATTTGGAATACCCTCGACCACACTATGGCAAAGAGCTCACAGACTGGGAATCGACACACCGAAAAAAGATGGCCCAACGAAATCGTGGAGCGACGAGAGTCTGAACAACGCCCTTGAGGCATTGAGAACGGGGACGATATCGGCGAACAAAGCGTCAAAAGCATTCGGTATACCGTCCAGTACGCTTTACAAAATCGCGCGAAGAGAAGGTATTAGGCTTGCGGCTCCATTCAACGCTAGTCCGACGACGTGGTCACCGGCGGATCTCGACAGAGCACTCGAAGCTATTAGGTCCGGTCAGACATCGGTACAGAGAGCGTCGACGGAATTTGGTATTCCAACGGGTACATTGTACGGTAGATGCAAGAGAGAGGGCATAGAATTGAGCCGTAGCAATCCTACACCTTGGAGCGAGGACGCAATGACAGAGGCACTCGAGGCGGTCAGATTGGGTCACATGAGCATCAATCAAGCTGCTATACATTACAATCTACCTTACTCGTCTCTCTACGGGCGCTTCAAGAGGGGAAAGTACGAAGATCCAGTGGTGAGCGAGATGTCACAAGACGGCAGCAATCCTCACTTTCATTCGCATCAGAGTCCGCATCAAAATCACTCCTCGTCGCTACCCGATCAAATGCCTTATCAGGGCAGCTGA
Protein Sequence: MESWNDQSDISLLKTADQLKIKGLCEVPESREGPPSVSLSSPPPRDSTATRLNYTKLKRHHPRYKRQRTSFEPRETSADSRNYDKYKEEEHNIEGLGRDNNKENHRGDWQTEDEECGADAASVVLESCQRDSNNGNGTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDTDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHAADNDNMMMITPELLGLMPSGSSVHSDSGENNSRGGGSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEDPVVSEMSQDGSNPHFHSHQSPHQNHSSSLPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_01560354;
80% Identity: iTF_00829635;