Basic Information

Insect: Amblyjoppa proteus
Gene Symbol: -
Assembly: GCA_963922035.1
Location: OY998233.1:10059781-10063230[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.5e-12 1.4e-09 37.9 0.0 1 39 287 326 287 330 0.90

2 4 4.6e-12 4.4e-09 36.3 0.1 2 39 342 379 341 382 0.94

3 4 1.7e-18 1.6e-15 57.0 0.0 2 45 397 441 396 441 0.97

4 4 2e-18 1.9e-15 56.7 0.0 1 42 448 490 448 491 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.5e-12	1.4e-09	37.9	0.0	1	39	287	326	287	330	0.90
2	4	4.6e-12	4.4e-09	36.3	0.1	2	39	342	379	341	382	0.94
3	4	1.7e-18	1.6e-15	57.0	0.0	2	45	397	441	396	441	0.97
4	4	2e-18	1.9e-15	56.7	0.0	1	42	448	490	448	491	0.97

Sequence Information

Coding Sequence: ATGTTCTTATTTTGCCCTCATTTTCGAATTTACCTCTACCAATCCTTGCTGAAGACGGCCGATCAGCTGAAAATCAAGGGCCTCTGCGAGGTCCCGGAGAGCAGAGAAGGACCGCCGTCGGTGAGCCTGAGTTCGCCACCGCCCCGCGACACCGGCACGACGAGGCTGAACTACACGAAACTGAAGAGGCATCATCCGAGATACAAGAGGCAGAGAACAACGTTCGAGCCACGGGCAACGAGTACGGATTCGCGTCACTACGACAAGTACAAAGAGGAAGAGAACGAAATCGAGGGCCTCGGCCGTGACAACAACAAAGAGAACCACAGAGGCGACTGGCAGACGGAGGATGAGGAGTGCGGCGCGGAGACAGCATCAGTAGTCCTGGAATCCTGCCAGCGCGACAGCAACAACGGTAACGGTACAAACAACAATAACGGTGACATGTTCTGTCACACAGGTCTAGGTCATTACGGTCATCATCCGGATCCTGGAGAGGTCGACCTACCGCCCGAGACCCAGCCAACACCACCCAGCGCGACGCTCGTCGGCACGACGATAACGCATTTGCGCGACACCGATCATCACTCGACCGACATTCAGAACTGTGACAGCGTCAAGATAAAATTCGAGACGCTTCACACAATGGATTCGTCGGACACGATCGACATCGACAGCCACATGTCGGATCGGGCGAGCGTCAGTTCGAAACACGCCGCCGAGAGCGACAACATGATGATGATAACGCCGGAACTTTTGGGTCTCATGCCTTCCGGCAGCTCGGTGCACTCGGATTCCGGTGAAAATAATTCTCGAGGCGGAGGATCTGGCTCACATCATCACGGATCGAAATCTTGGACGCAGGAGGACATGGATGCGGCTCTCGAGGCTCTCAGGAACCACGATATGAGCCTTACGAAAGCGTCAGCGACCTTCGGAATCCCTTCGACGACGCTGTGGCAAAGAGCTCACAGACTGGGCATAGACACACCGAAGAAGGACGGCCCGACGAAATCGTGGAGCGACGAGAGTCTGAACAACGCCCTTGAAGCTCTCAGAACCGGTACTATATCCGCCAACAAAGCGTCGAAGGCGTTCGGCATACCATCCAGTACACTGTACAAAATCGCAAGGAGAGAAGGCATAAGGCTCGCGGCACCTTTCAACGCTAGTCCAACAACATGGTCGCCGGCCGATCTCGACAGAGCCCTCGAAGCTATAAGGTCCGGTCAGACGTCGGTGCAGCGAGCGTCTACGGAGTTTGGCATTCCTACCGGAACTCTTTACGGTAGATGCAAGAGGGAAGGCATCGAGCTGAGCAGAAGCAATCCTACGCCTTGGAGCGAGGACGCGATGACGGAGGCGCTCGAGGCTGTCAGGTTGGGTCACATGAGCATCAATCAGGCTGCCATTCACTACAATCTCCCGTACTCGTCGCTTTACGGAAGATTCAAGAGGGGAAAGTATGAGGATCCTGTGGTCAGCGAAATGTCGCAAGACGGAAGCAATCCACATTTTCATTCGCATCAGAGTCCACATCAGAATCACTCGTCCTCCCTACCCGATCAAATGCCTTATCAGGGTAGCTGA
Protein Sequence: MFLFCPHFRIYLYQSLLKTADQLKIKGLCEVPESREGPPSVSLSSPPPRDTGTTRLNYTKLKRHHPRYKRQRTTFEPRATSTDSRHYDKYKEEENEIEGLGRDNNKENHRGDWQTEDEECGAETASVVLESCQRDSNNGNGTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDTDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHAAESDNMMMITPELLGLMPSGSSVHSDSGENNSRGGGSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEDPVVSEMSQDGSNPHFHSHQSPHQNHSSSLPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_01560354;
80% Identity: iTF_00057841;