Carm025407.1
Basic Information
- Insect
- Cryptus armator
- Gene Symbol
- bab2
- Assembly
- GCA_963971235.1
- Location
- OZ020235.1:19174642-19194883[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.3e-12 2.8e-09 37.6 0.0 1 39 392 431 392 435 0.90 2 4 6.9e-12 8.5e-09 36.0 0.1 2 39 447 484 446 487 0.94 3 4 2.5e-18 3.1e-15 56.6 0.0 2 45 502 546 501 546 0.97 4 4 7.8e-18 9.6e-15 55.1 0.0 1 42 553 595 553 596 0.97
Sequence Information
- Coding Sequence
- atggAGAAGCCACGTTATTGGGGCGTGCATTACAGCGGAGGTATGGCCGGGCAGCACTACTGCCTGCGCTGGAACAATTACCAGTCAAATATGACGTCCGTCTTTCATCAGCTGCTACAGACGGAGGCCTTCGTGGACGTCACCCTGGCCTGCAACGAGGCTTCGTTAAAGGCGCACAAGgtCGTACTATCGGCTTGCAGTTCGTACTTCAAAAAGCTTCTCCTCTCGAATCCGTGCAAACATCCCACGATAATAATGCCACAGGACGTTTGCTTCAACGATCTCAAATTCATCATCGAATTTGTTTACAAGGGAGAGATCGACGTATCACAGGCCGAGCTTCAGtcccTGCTGAAGACGGCCGATCAGCTGAAAATCAAGGGCCTCTGCGAGGTCCCGGAGAGCAGAGAAGGACCGCCCCCGGTGAGCCTCAGTTCACCACCGCCCCGTGATACCGGCACGACGAGGTTAAACTACTTCACGAAACTTAAGAGGCATAATCCGAGATACAAGAGGCAGAGAACGACGTTCGAACCACGCGCAACGAGTACGGATTCGCGTCACTACGACAAGTACAAAGGAGAAGAGCACATAGGAAGCGACATCGAGGGCCTCGGCGGTGACAACAACAAAGAgAACCACAGAGGCGACTGGCAGACGGAGGATGAGGAGTGCGGCGCGGAGGCAGCATCAGTAGTCCTGGAATCCTGCCAGCGCGACAGCAACAACGTTAACGGTACAAACAACAATAACGGTGACATGTTCTGTCACACAGGCTTAGGTCATTACGGTCATCATACGGATCCTGGAGAGGTTGATCTACCGCCCGAGACCCAACCAACACCACCGAGCGCTACACTTGTCGGCACGACGATAACGCATCTTCGGGACACCGATCATCACTCGACCGACATTCAAAACTGTGACAGCGTCAAAATTAAATTCGAGACCCTTCACACGATGGATTCATCGGACACGATCGACATCGACAGTCACATGTCCGATCGGGCGAGTGTCAGTTGTAAACATGCAGCCGAAAGCGACAACATGATGATGATAACGCCGGAACTTTTGGGACTCATGCCTTCCGGTAGCTCGGTACACTCGGACTCCGGTGAAAACAATTCGAGAGGCGGAGGTTCGGGATCTCATCATCACGGGTCAAAATCGTGGACGCAGGAAGACATGGATGCGGCACTCGAGGCTCTCAGAAATCACGATATGAGTCTAACGAAAGCATCGGCGACCTTTGGAATTCCCTCGACGACACTCTGGCAAAGGGCTCACCGACTGGGAATAGATACACCGAAGAAAGACGGACCGACGAAATCGTGGAGCGACGAGAGCCTAAATAACGCTCTCGAAGCATTGAGAACCGGAACGATATCCGCGAATAAAGCTTCCAAAGCGTTCGGTATACCTTCCAGTACACTTTATAAAATCGCGAGGAGAGAAGGCATAAGGCTTGCGGCACCTTTCAACGCTAGTCCCACAACATGGTCGCCGGCCGATCTCGATAGAGCCCTCGAAGCGATAAGATCCGGTCAGACATCGGTGCAGAGAGCGTCGACGGAATTTGGCATTCCTACGGGTACGCTGTACGGCAGATGCAAGAGGGAAGGCATCGAGTTGAGCAGAAGTAATCCCACGCCGTGGAGTGAGGACGCGATGACAGAGGCACTAGAGGCTGTTAGATTGGGACACATGAGCATCAATCAGGCGGCCATTCATTACAATCTTCCGTATTCGTCGCTTTACGGAAGATTCAAGAGGACAAAATACGAGGATCCGGTGGTCAGTGAGATGTCGCAAGACGGAAGCAATCCGCACTTTCATTCGCATCAGAGCCCACATCAGAATCACTCGTCCTCTCTTCCCGATCAAATGCCTTATCAGGGTAGCTGA
- Protein Sequence
- MEKPRYWGVHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFKKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCEVPESREGPPPVSLSSPPPRDTGTTRLNYFTKLKRHNPRYKRQRTTFEPRATSTDSRHYDKYKGEEHIGSDIEGLGGDNNKENHRGDWQTEDEECGAEAASVVLESCQRDSNNVNGTNNNNGDMFCHTGLGHYGHHTDPGEVDLPPETQPTPPSATLVGTTITHLRDTDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSCKHAAESDNMMMITPELLGLMPSGSSVHSDSGENNSRGGGSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRTKYEDPVVSEMSQDGSNPHFHSHQSPHQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_01560354;
- 80% Identity
- iTF_00397432; iTF_00397978; iTF_00398208;