Dlut000366.1
Basic Information
- Insect
- Dyspetes luteomarginatus
- Gene Symbol
- -
- Assembly
- GCA_963669185.1
- Location
- OY769903.1:3950835-3954728[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.3e-12 1.1e-09 37.9 0.0 1 39 287 326 287 330 0.90 2 4 3.9e-12 3.4e-09 36.3 0.1 2 39 342 379 341 382 0.94 3 4 2.2e-18 1.9e-15 56.3 0.0 2 45 397 441 396 441 0.97 4 4 4.9e-18 4.2e-15 55.3 0.0 1 42 448 490 448 491 0.97
Sequence Information
- Coding Sequence
- ATGGATGTTTTTGGCTGCTCTTTCCACTCGCGAATACGATCGtccttGCTGAAGACGGCCGACCAGTTGAAAATTAAGGGCCTCTGCGAGGTCCCGGAGAGCCGAGAAGTACCGCCCTCAGTTAGCCTGAGTTCACCACCACCGAGGGATTCAACGGCTACGAGgctaaattatacaaaattaaagAGGCATCATCCGCGTTACAAGAGGCAAAGAACGAGCTTCGAGCCACGACCAACGAGTACAGATCCACGTCATTACGACAAGCACAAAGAGGAGGTGCACAATATCGAAGGCCTCGGCCGTGACAACAACAAAGAGAATCACAGAGGTGACTGGCAGACGGAGGATGAAGAGTGTGGCGCGGATGCACCATCAATAGTCCTGGAATCCTGCCAGCGCGACAGCAACAACGGTAACGGTACAAACAACAATAACGGTGACATGTTCTGTCACACAGGTCTAGGTCATTACGGTCATCATCCGGATCCTGGAGAAGTAGATTTGCCGCCTGAGACACAGCCAACGCCACCAAGCGCAACTCTCGTTGGTACGACGATAACGCATCTTCGTGACAACGATCATCATTCAACGGATATACAAAATTGCGATAGTGTAAAGATAAAATTCGAGACATTACACACGATGGATTCCTCAGATACGATTGACATTGACAGTCACATGTCTGACCGTGCGAGTGTCAGCTCAAAACACGCTGCCGAAAATGACAACATGATGATGATAACACCGGAATTATTGGGCCTAATGCCATCGGGTAGTTCCGTACATTCGGACTCgggtgaaaataattcacgagGTGGTGGCTCCGGTTCGCATCATCATGGCTCAAAATCATGGACGCAAGAGGACATGGACGCGGCACTTGAGGCACTCAGAAATCACGATATGAGCCTAACAAAAGCCTCAGcaactTTTGGAATTCCCTCAACGACACTGTGGCAACGAGCTCACCGATTGGGCATCGATACACCGAAAAAGGATGGTCCAACAAAATCATGGAGCGACGAGAGTCTGAATAATGCACTGGAGGCACTGAGAACCGGTACGATATCAGCGAACAAAGCATCAAAAGCTTTTGGCATACCGTCTAGTACGCTTTACAAAATTGCTCGGAGAGAGGGAATAAGGCTTGCTGCGCCTTTTAACGCAAGTCCAACGACATGGGCACCAGCTGATCTTGATCGTGCCCTTGAGGCTATTAGATCGGGTCAAACATCGGTACAGCGAGCTTCGACGGAATTTGGAATTCCCACCGGTACGCTTTATGGTAGATGCAAGAGAGAGGGCATAGAATTGAGTCGAAGCAATCCAACACCTTGGAGCGAAGACGCGATGACCGAGGCGCTCGAGTCTGTAAGATTGGGTCACATGAGCATAAATCAAGCTGCGATACACTACAATCTTCCTTACTCGTCGCTCTATGGACGCTTCAAGAGGGGCAAATACGAGGATCCTGTGGTCAGTGAGATGTCACAAGATGGCAGCAATCCGCATTTTCATTCGCACCAGAGCCCACATCAGAATCATTCGACATCTCTTCCCGATCAAATGCCCTATCAGGGCAGCTGA
- Protein Sequence
- MDVFGCSFHSRIRSSLLKTADQLKIKGLCEVPESREVPPSVSLSSPPPRDSTATRLNYTKLKRHHPRYKRQRTSFEPRPTSTDPRHYDKHKEEVHNIEGLGRDNNKENHRGDWQTEDEECGADAPSIVLESCQRDSNNGNGTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDNDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHAAENDNMMMITPELLGLMPSGSSVHSDSGENNSRGGGSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWAPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALESVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEDPVVSEMSQDGSNPHFHSHQSPHQNHSTSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_01560354;
- 80% Identity
- -