Basic Information

Insect: Exephanes ischioxanthus
Gene Symbol: -
Assembly: GCA_958510785.1
Location: OY294016.1:22504960-22513099[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.2e-12 1.3e-09 37.9 0.0 1 39 279 318 279 322 0.90

2 4 3.7e-12 4e-09 36.4 0.1 2 39 334 371 333 374 0.94

3 4 1.3e-18 1.5e-15 57.0 0.0 2 45 389 433 388 433 0.97

4 4 1.6e-18 1.7e-15 56.7 0.0 1 42 440 482 440 483 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.2e-12	1.3e-09	37.9	0.0	1	39	279	318	279	322	0.90
2	4	3.7e-12	4e-09	36.4	0.1	2	39	334	371	333	374	0.94
3	4	1.3e-18	1.5e-15	57.0	0.0	2	45	389	433	388	433	0.97
4	4	1.6e-18	1.7e-15	56.7	0.0	1	42	440	482	440	483	0.97

Sequence Information

Coding Sequence: ATGTACTATTTATACATGTCCTTGCTGAAGACGGCCGATCAGTTGAAAATCAAGGGCCTCTGCGAGGTCCCGGAGAGCAGAGAAGGACCGCCGTCGGTGAGCCTGAGTTCGCCACCGCCCCGAGACACCGGCACGACGAGGCTGAACTACACGAAACTGAAGAGGCATCATCCGAGATACAAGAGGCAGAGAACCACGTTCGAGCCACGGGCGACGAGTACGGATTCGCGTCACTACGACAAGTACAAAGAGGAAGAGCACGACATCGAGGGCCTCGGCCGTGACAACAACAAAGAGAACCACAGAGGCGACTGGCAGACGGAGGATGAGGAGTGCGGCGCGGAGACAGCATCAGTAGTCCTGGAATCCTGCCAGCGCGACAGCAACAACGGTAACGGTACAAACAACAATAACGGTGACATGTTCTGTCACACAGGTCTAGGTCATTACGGTCATCATCCGGATCCTGGAGAGGTCGACCTACCGCCCGAGACCCAGCCAACACCACCCAGCGCGACGCTCGTCGGCACGACGATAACGCATCTGCGCGACACCGATCATCACTCGACCGACATTCAGAACTGTGACAGCGTCAAGATAAAATTCGAGACGCTTCACACAATGGATTCGTCGGACACGATCGACATCGACAGCCACATGTCGGATCGGGCGAGCGTCAGTTCGAAACACGCCGCCGAGAGCGACAACATGATGATGATAACGCCGGAACTTTTGGGTCTCATGCCTTCCGGCAGCTCGGTACACTCGGACTCCGGTGAGAATAATTCCCGAGGTGGAGGATCTGGTTCACATCATCACGGATCGAAATCTTGGACGCAGGAGGACATGGATGCGGCTCTCGAGGCTCTCAGGAACCACGATATGAGCCTTACGAAAGCGTCAGCGACCTTTGGAATCCCCTCGACGACGCTGTGGCAAAGAGCTCACAGACTCGGCATAGACACACCGAAGAAGGACGGCCCGACGAAATCGTGGAGCGACGAGAGTCTGAACAACGCCCTCGAAGCTCTCAGAACCGGCACGATATCCGCCAACAAAGCGTCGAAGGCGTTCGGCATACCATCCAGTACACTATACAAAATCGCGAGGAGAGAAGGCATAAGGCTCGCGGCACCTTTCAACGCTAGTCCAACAACATGGTCGCCGGCCGATCTCGACAGAGCCCTCGAAGCTATAAGGTCCGGTCAGACGTCGGTGCAGCGAGCGTCTACGGAGTTTGGCATTCCTACCGGAACTCTTTACGGTAGATGCAAGAGGGAAGGCATCGAGTTGAGCAGAAGCAATCCTACGCCTTGGAGCGAGGACGCGATGACGGAAGCGCTCGAGGCTGTCAGGTTGGGTCACATGAGCATCAATCAGGCCGCCATTCACTACAATCTCCCGTACTCGTCGCTTTACGGAAGATTCAAGAGGGGAAAGTACGAGGATCCTGTGGTCAGCGAGATGTCGCAAGACGGGAGCAATCCACATTTTCATTCGCATCAGAGTCCACATCAGAATCACTCGTCCTCCCTACCCGATCAAATGCCTTATCAAGGTAGCTGA
Protein Sequence: MYYLYMSLLKTADQLKIKGLCEVPESREGPPSVSLSSPPPRDTGTTRLNYTKLKRHHPRYKRQRTTFEPRATSTDSRHYDKYKEEEHDIEGLGRDNNKENHRGDWQTEDEECGAETASVVLESCQRDSNNGNGTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDTDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHAAESDNMMMITPELLGLMPSGSSVHSDSGENNSRGGGSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEDPVVSEMSQDGSNPHFHSHQSPHQNHSSSLPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_01560354;
80% Identity: iTF_00059559;