Basic Information

Insect: Ophion ellenae
Gene Symbol: -
Assembly: GCA_963210295.1
Location: OY723392.1:36295699-36319320[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.1e-12 2.1e-09 37.8 0.0 1 39 320 359 320 363 0.90

2 4 3.5e-12 6.3e-09 36.2 0.1 2 39 375 412 374 415 0.94

3 4 2e-18 3.6e-15 56.2 0.0 2 45 430 474 429 474 0.97

4 4 4.3e-18 7.8e-15 55.2 0.0 1 42 481 523 481 524 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.1e-12	2.1e-09	37.8	0.0	1	39	320	359	320	363	0.90
2	4	3.5e-12	6.3e-09	36.2	0.1	2	39	375	412	374	415	0.94
3	4	2e-18	3.6e-15	56.2	0.0	2	45	430	474	429	474	0.97
4	4	4.3e-18	7.8e-15	55.2	0.0	1	42	481	523	481	524	0.97

Sequence Information

Coding Sequence: ATGGTCCCCGATAGACTGGCTTGTTCCGAGGCTTTCGCTGCGCGCATTCCCCTGCTGCGTGGCCGAGCAAGCCACGTGGTTGCAAAAGGGGTCGTCGCCATCCTCGCCGTctccgtcgtcgtcgtcgtcgacggTGGTTCATTCAGTAAGAAGACGGCCGATCAGCTAAAGATCAAGGGCCTCTGCGAGGTTCCCGAGAGCAGAGAAGGTCCACCGTCAGTGAGCCTTAGCTCGCCGCCGCCGCGGGACTCGACGGCTACGAGGCTCAACTATACGAAACTAAAGAGGCATCATCCCCGCTTCAAGAGACAAAGAACGAGCTTCGAGCCGCGAGCAACGTCCGCGGATTCACGCAACTACGACAAGTACAAAGAGGAGGAGCACAATATCGAAGGCCTCGGCCGTGACAACAACAAAGAGAATCACAGAGGTGACTGGCAGACGGAGGATGAGGAGTGCGGAGCGGAGGCAGCATCAGTAGTCCTGGAATCCTGCCAGCGAGACAGCAACAACGGTAACGGTACAAACAACAATAACGGTGACATGTTCTGTCACACAGGTCTAGGTCATTACGGTCATCATCCAGATCCTGGAGAGGTAGATCTACCCCCGGAAACACAGCCAACGCCACCGAGCGCCACACTCGTCGGCACAACGATAACGCATCTTCGCGACCCCGACCATCACTCGACGGATATACAAAATTGCGACagcgtaaaaataaaattcgagaCTCTGCACACGATGGACTCCTCCGACACGATCGACATCGACAGTCACATGTCCGATCGGGCCAGCGTCAGCTCGAAACACGCGGCCGACAACGACAACATGATGATGATAACACCGGAACTCTTGGGACTGATGCCCTCCGGTAGTTCCGTACACTCGGACTCGGGTGAGAACAACTCCCGAGGCGGTGGCTCCGGTTCTCATCATCACGGCTCGAAATCGTGGACTCAGGAAGACATGGATGCGGCCCTCGAAGCACTGAGAAATCACGACATGAGCCTTACGAAAGCCTCAGCAACCTTTGGAATTCCGTCGACGACACTGTGGCAGAGGGCGCACAGGCTCGGTATCGACACACCGAAGAAAGACGGGCCGACGAAATCGTGGAGCGACGAGAGCCTGAACAACGCCCTCGAGGCACTGAGAACCGGCACGATATCGGCGAACAAAGCGTCAAAAGCATTCGGCATACCGTCCAGCACGCTTTACAAAATCGCGAGAAGAGAGGGCATCAGATTAGCGGCGCCGTTCAACGCGAGCCCGACTACTTGGGCACCGGCCGATCTCGACAGAGCACTCGAGGCGATTAGGTCGGGTCAGACTTCGGTACAGAGAGCGTCCACGGAATTTGGTATTCCGACGGGTACATTGTACGGTAGATGCAAGAGAGAGGGCATAGAATTGAGCCGTAGCAATCCCACACCCTGGAGCGAGGACGCGATGACAGAGGCACTCGAGTCCGTCAGATTGGGTCACATGAGCATCAATCAAGCTGCTATACATTACAATCTACCTTACTCGTCTCTCTACGGGCGCTTCAAGAGGGGCAAATACGAAGATCCGGTGGTGAGCGAGATGTCACAAGACGGCAGCAATCCTCACTTTCATTCGCATCAGAGTCCGCATCAAAATCACTCCTCGTCGCTACCCGATCAAATGCCTTATCAGGGCAGCTGA
Protein Sequence: MVPDRLACSEAFAARIPLLRGRASHVVAKGVVAILAVSVVVVVDGGSFSKKTADQLKIKGLCEVPESREGPPSVSLSSPPPRDSTATRLNYTKLKRHHPRFKRQRTSFEPRATSADSRNYDKYKEEEHNIEGLGRDNNKENHRGDWQTEDEECGAEAASVVLESCQRDSNNGNGTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHAADNDNMMMITPELLGLMPSGSSVHSDSGENNSRGGGSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWAPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALESVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEDPVVSEMSQDGSNPHFHSHQSPHQNHSSSLPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_01560354;
80% Identity: -