Basic Information

Insect: Stenichneumon culpator
Gene Symbol: -
Assembly: GCA_964017025.1
Location: OZ024780.1:4560162-4569563[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.4e-12 1.5e-09 37.8 0.0 1 39 312 351 312 355 0.90

2 4 4.4e-12 4.7e-09 36.3 0.1 2 39 367 404 366 407 0.94

3 4 1.6e-18 1.7e-15 56.9 0.0 2 45 422 466 421 466 0.97

4 4 1.9e-18 2e-15 56.6 0.0 1 42 473 515 473 516 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.4e-12	1.5e-09	37.8	0.0	1	39	312	351	312	355	0.90
2	4	4.4e-12	4.7e-09	36.3	0.1	2	39	367	404	366	407	0.94
3	4	1.6e-18	1.7e-15	56.9	0.0	2	45	422	466	421	466	0.97
4	4	1.9e-18	2e-15	56.6	0.0	1	42	473	515	473	516	0.97

Sequence Information

Coding Sequence: ATGCCTCTTATACTCGTCGAAATGTATATTGAAATGTGTGAAACTCTTTATTCTGGAGCTTATTTTCTTACTAATCAGCAACAAACAGTTCTCGACATAGTCGTCTACTGCCAAATGtccTTGCTGAAGACGGCCGATCAGTTGAAAATCAAGGGCCTCTGCGAGGTCCCGGAGAGCAGAGAAGGACCGCCGTCGGTGAGCCTGAGTTCGCCACCGCCCCGCGATACCGGCACGACGAGGCTGAACTACACGAAACTGAAGAGGCATCATCCGAGATACAAGAGGCAGAGAACTACGTTCGAGCCGCGTGCAACGAGTACGGATTCGCGTCACTACGACAAGTACAAAGAGGAAGAGCACGACATCGAGGGCCTCGGCCGTGACAACAACAAAGAGAACCACAGAGGCGACTGGCAGACGGAGGATGAGGAGTGCGGCGCGGAGACAGCATCAGTAGTCCTGGAATCCTGCCAGCGCGACAGCAACAACGGTAACGGTACAAACAACAATAACGGTGACATGTTCTGTCACACAGGTCTAGGTCATTACGGTCATCATCCGGATCCTGGAGAGGTCGACCTACCGCCCGAGACCCAGCCAACACCACCCAGCGCGACGCTCGTCGGCACGACGATAACGCATCTGCGCGACACCGATCATCACTCGACCGACATTCAGAACTGTGACAGCGTCAAGATAAAATTCGAGACGCTTCACACAATGGATTCGTCGGACACGATCGACATCGACAGCCACATGTCGGATCGGGCGAGCGTCAGTTCGAAACACGCTGCCGAGAGCGACAACATGATGATGATAACGCCGGAACTCTTGGGTCTCATGCCTTCCGGCAGCTCGGTACACTCGGACTCCGGTGAGAATAATTCCCGAGGCGGAGGATCTGGTTCACATCATCACGGATCGAAATCTTGGACGCAGGAGGACATGGATGCGGCTCTCGAGGCTCTCAGGAACCACGATATGAGCCTTACGAAAGCGTCAGCGACCTTTGGAATCCCCTCGACGACGCTGTGGCAAAGAGCTCACAGACTCGGCATAGACACACCGAAGAAGGACGGCCCGACGAAATCGTGGAGCGACGAGAGTCTGAACAACGCCCTCGAAGCTCTCAGAACCGGTACGATATCCGCCAACAAAGCGTCGAAGGCGTTCGGCATACCATCCAGTACACTATACAAAATCGCGAGGCGAGAAGGCATAAGGCTCGCGGCACCATTCAACGCTAGTCCAACAACATGGTCTCCGGCCGATCTCGACAGAGCCCTCGAAGCTATAAGGTCCGGTCAGACGTCGGTGCAGCGAGCGTCCACGGAGTTTGGCATTCCTACCGGAACTCTTTACGGTAGATGCAAGAGGGAAGGCATCGAGTTGAGCAGAAGCAATCCTACGCCTTGGAGCGAGGACGCGATGACGGAGGCGCTCGAGGCTGTCAGGTTGGGTCACATGAGCATCAATCAGGCCGCCATTCACTACAATCTCCCGTACTCGTCGCTTTACGGAAGATTCAAGAGGGGAAAGTACGAGGATCCTGTGGTCAGCGAGATGTCGCAAGACGGAAGCAATCCACATTTTCATTCGCATCAGAGTCCACATCAGAATCACTCGTCCTCCCTACCCGATCAAATGCCTTATCAGGGTAGCTGA
Protein Sequence: MPLILVEMYIEMCETLYSGAYFLTNQQQTVLDIVVYCQMSLLKTADQLKIKGLCEVPESREGPPSVSLSSPPPRDTGTTRLNYTKLKRHHPRYKRQRTTFEPRATSTDSRHYDKYKEEEHDIEGLGRDNNKENHRGDWQTEDEECGAETASVVLESCQRDSNNGNGTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDTDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHAAESDNMMMITPELLGLMPSGSSVHSDSGENNSRGGGSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEDPVVSEMSQDGSNPHFHSHQSPHQNHSSSLPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_01560354;
80% Identity: iTF_00059559;