Oarm009115.1
Basic Information
- Insect
- Oxytorus armatus
- Gene Symbol
- -
- Assembly
- GCA_958009045.1
- Location
- OY253748.1:19831733-19838426[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-12 1.2e-09 37.9 0.0 1 39 283 322 283 326 0.90 2 4 3.4e-12 3.7e-09 36.4 0.1 2 39 338 375 337 378 0.94 3 4 1.2e-18 1.3e-15 57.0 0.0 2 45 393 437 392 437 0.97 4 4 1.5e-18 1.6e-15 56.7 0.0 1 42 444 486 444 487 0.97
Sequence Information
- Coding Sequence
- ATGGAAATCCGACTCATGGGTCATGCAAGGtccttgCTGAAAACGGCCGATCAGTTGAAGATCAAGGGCCTCTGTGAGGTCCCGGAGAGCAGGGAAGGACCGCCCTCGGTGAGTCTCAGTTCACCTCCGCCGCGAGATTCAACGTCAACGAGGCTAAACTACACGAAACTAAAGAGGCATCATCCGCGCTACAAGAGGCAAAGAACGACCTTCGAGCCACGAGCAACGAGTACGGATTCGCGTAACTACGACAAGTACAAAGAGGAGGAGCACAACATCGAAGGCCTCGGCCGTGACAACGACAAAGAGAATCACAGAGGTGACTGGCAGACGGAGGATGAGGAGTGCGGAGCGGATGCACCATCAATAGTCCTGGAATCCTGCCAGCGCGACAGCAACAACGGTAACGGTACAAACAACAATAACGGTGACATGTTCTGTCACACAGGTCTAGGTCATTACGGTCATCATCCGGATCCTGGAGAGGTAGATCTACCGCCCGAGACACAGCCAACACCACCGAGCGCTACTCTCGTCGGTACGACGATAACTCATCTACGCGATACCGATCATCACTCGACGGataTACAGAATTGCGACagcgtgaaaataaaattcgaaactCTGCACACGATGGATTCGTCGGATACTATCGATATCGACAGTCACATGTCCGATCGTGCGAGCGTTAGCTCCAAACACGCCGCCGATAACGACAATATGATGATGATAACACCGGAACTTTTGGGTCTCATGCCATCGGGTAGTTCGGTACACTCGGACTCTGGTGAAAATAATTCGCGCGGTGGTGGCTCGGGTTCTCATCATCATGGCTCGAAATCATGGACCCAGGAGGACATGGATGCCGCTCTCGAGGCGCTCAGAAATCACGATATGAGCCTCACAAAAGCTTCAGcaACCTTCGGAATACCTTCGACGACACTATGGCAAAGAGCTCACAGACTCGGCATTGACACACCGAAGAAGGACGGTCCAACGAAATCATGGAGCGACGAGAGTCTCAACAACGCACTGGAGGCACTGAGAACGGGCACGATATCGGCGAACAAAGCATCAAAAGCATTCGGCATACCGTCCAGTACACTTTATAAAATCGCGAGAAGAGAGGGTATAAGACTCGCGGCGCCTTTCAACGCTAGTCCAACGACATGGTCACCCGCCGATCTTGACAGAGCGCTAGAAGCTATTAGATCCGGTCAGACATCGGTACAGAGAGCGTCAACGGAATTTGGTATACCAACGGGTACGTTATACGGTAGATGCAAGAGAGAGGGCATAGAATTGAGCCGTAGCAATCCTACACCATGGAGCGAGGACGCGATGACAGAGGCACTCGAGGCGGTCAGATTGGGTCACATGAGCATCAATCAAGCTGCTATACATTACAATCTACCTTACTCGTCTCTCTACGGGCGCTTCAAGAGGGGAAAGTACGAGGATCCGGTCGTGAGCGAGATGTCACAAGACGGCAGCAATCCTCACTTTCATTCGCATCAGAGCCCTCATCAGAATCACTCGTCGTCTCTACCCGATCAAATGCCTTATCGGGGCAGCTGA
- Protein Sequence
- MEIRLMGHARSLLKTADQLKIKGLCEVPESREGPPSVSLSSPPPRDSTSTRLNYTKLKRHHPRYKRQRTTFEPRATSTDSRNYDKYKEEEHNIEGLGRDNDKENHRGDWQTEDEECGADAPSIVLESCQRDSNNGNGTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDTDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKHAADNDNMMMITPELLGLMPSGSSVHSDSGENNSRGGGSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEDPVVSEMSQDGSNPHFHSHQSPHQNHSSSLPDQMPYRGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_01560354;
- 80% Identity
- -