Mdem004266.1
Basic Information
- Insect
- Microplitis demolitor
- Gene Symbol
- bab2
- Assembly
- GCA_000572035.2
- Location
- NW:280547-300399[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.4e-12 2.2e-09 36.2 0.0 1 39 408 447 408 451 0.90 2 4 2.8e-12 2.6e-09 36.0 0.1 2 39 463 500 462 503 0.94 3 4 1e-18 9.5e-16 56.6 0.0 2 45 518 562 517 562 0.97 4 4 1.1e-18 1.1e-15 56.4 0.1 1 42 569 611 569 612 0.97
Sequence Information
- Coding Sequence
- ATGGAGGCTGCTCGTTACTGGGGTGTTCACTACAgCGGAGGGATGGCCGGGCAGCATTACTGCCTGCGCTGGAACAATTACCAGTCAAATATGACCTCAGTGTTCCACCAGCTTTTGCAAACGGAGGCTTTCGTGGACGTGACACTTGCCTGCAACGAGGCATCGTTAAAGGCGCACAAGgtcGTGCTATCAGCATGCAGTTCATACTTTAAAAAACTCCTGCTATCAAACCCCTGCAAGCATCCGACGATAATAATGCCCCAGGACGTGTGTTTCAACGACTTGAAATTCATAATAGAGTTCGTCTATAAGGGGGAAATAGACGTGTCCCAAGCGGAACTTCAGtcattatTGAAAACGGcggatcaattaaaaataaaaggactCTGCGAAGTGCCGGAGAGTAAGGAAGCGCCAGCAACAGTAAGCTTGAGCTCGTCACCACGAGAACCAGGAGGTGGTGCATCGAGATTCAATTACGCGAAACTTAAGAGACATCACCCAAAGTACAAACGACAACGAACGGGATTCGCTGGTGGAGTTGCTGGCGTTGGAGAGGCTGCTGTTGGAGGAGGAGCTGGAAGACCGACTAGCACTGACTCGAGGGGACAATACGACAGGTACAAAGAGGAGGATAACGAGAACACTGGGGCTGGAGGATTCGGCTGTGAAAACGACAAAGAGAATCACCGGGGTGACTGGCAGACGGAGGATGAGGAGTGCGGAGGAGACGCAGCAGTAATCCTGGAATCCTGCCAGCGAGACACCAACAACGGTAACGGCACAAACAACAATAACGgtGACATGTTCTGTCACACAGGTCTAGGTCATTACGGTCACCATCCGGATCCAGGCGAAGTCGACTTACCACCAGAGACTCAGCCGACGCCGCCGAGTGCCACCCTCGTCGGTACCACTATCACACATCTCAGGGACACTGATAACCATTCTACAGaTATACAAAATTGTGAtaacgttaaaataaaatttgaaacactTCACACGATGGATTCATCAGACACAATAGACATTGACAGTCATATGTCGGATTGTGCGAGCGTTAGTTCTAAACATGCAGCTGAGGGTGACAATATGATGATGATAACACCCGAATTATTGGGTTTGATGCCGTCCGGCAGTTCAGTTCATTCAAATTCCGGTGAAAACAATTCACGAAGTCACTCGGGAGGCTCTGGACATCATCATGGCTCTAAATCATGGACACAGGAAGACATGGACGCTGCACTTGACGCTCTCAGGAATCACGACATGAGTTTAACAAAAGCTTCGGCGACATTCGGAATCCCATCGACGACATTGTGGCAGCGCGCCCACCGACTGGGCATCGACACTCCAAAGAAAGACGGACCCACTAAATCCTGGAGCGACGAGAGTCTGAACAACGCGTTGGAGGCTCTAAGGACGGGAACTATTTCCGCGAACAAAGCGTCGAAGGCGTTCGGCATACCCTCGAGTACGCTGTACAAAATAGCCAGGAGAGAGGGCATAAGATTGGCGGCTCCATTCAATGCGAGTCCCACCACTTGGTCGCCGGCGGATCTTGACAGAGCTCTTGAGGCAATAAGGTCTGGCCAGACTTCTGTACAAAGAGCTTCCACCGAATTCGGTATACCCACGGGTACTCTCTACGGGAGATGTAAACGAGAGGGAATTGAATTGAGTCGGAGTAATCCAACTCCTTGGAGTGAGGATGCTATGACCGAAGCTCTCGAAGCTGTCAGGTTGGGTCACATGAGTATAAATCAAGCGGCAATTCATTACAATCTCCCATACTCATCTCTCTACGGTCGTTTCAAACGCGGCAAGTATGAAGAGCCAGTCGCAGAGTTATCTCAAGACGGTACAAATCCCCACTTCCATCAGAGCCCGCACCACAATCACTCATCTTCACTTCCCGATCAAATGCCTTATCAGGGCAGCTGA
- Protein Sequence
- MEAARYWGVHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFKKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYKGEIDVSQAELQSLLKTADQLKIKGLCEVPESKEAPATVSLSSSPREPGGGASRFNYAKLKRHHPKYKRQRTGFAGGVAGVGEAAVGGGAGRPTSTDSRGQYDRYKEEDNENTGAGGFGCENDKENHRGDWQTEDEECGGDAAVILESCQRDTNNGNGTNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDTDNHSTDIQNCDNVKIKFETLHTMDSSDTIDIDSHMSDCASVSSKHAAEGDNMMMITPELLGLMPSGSSVHSNSGENNSRSHSGGSGHHHGSKSWTQEDMDAALDALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVAELSQDGTNPHFHQSPHHNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_01560354;
- 80% Identity
- iTF_01003650; iTF_01004990;