Basic Information

Gene Symbol
KDM5A
Assembly
GCA_963932345.1
Location
OZ010721.1:10830631-10872232[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.3e-25 3e-22 79.0 0.0 2 89 163 246 162 246 0.94
2 2 4.8 1.1e+04 -2.9 0.1 49 81 884 914 881 918 0.64

Sequence Information

Coding Sequence
ATGGTATCTAAGCTCGATGTAAATATCGGCTGCGAGCCTGCCAGATTCGCAACGACCATTACGACAACGACGAGCGTCACCGCCACCACCGCCACCAACACCACCACGTCGACGATCACGACTCGACAACAAAATACAAATCGCGCTCTCAACAAATCCAGCAAAGACACATCCCCGGCAAAGCAACAAGCAATGGATAACAATAAACAAACGAGTCGGGTCAGCGCCAAAGATACGGGAGACAGAAGCGAGTCCGATTTCGAGTTCGGCATCCCACCCGAAGCTCCGGTCTTCGAGCCAACAGCCGAAGAGTTTCTCGATCCTCTCGGCTACATCGCTAAAATACGACCGATCGCGGAAAAATCTGGTATATGCAAGATCAAACCGCCACCCAACTGGCAGCCACCTTTTGCCGTCGACGTCGACAAGTTCAAATTCGTACCGAGGATACAGAGGCTAAACGAACTAGAGGCGAAGACACGAATAAAACTCAATTTTTTAGATCAAATTGCCAAATTTTGGGAACTGCAGGGATCCTCGCTGAAAATACCACTGGTCGAAAGAAAAGCTTTGGATCTCTATTCGCTTCACAGGATCGTTACCGAAGAAGgtggaatcGAAAATGTGACGCGGGAACGAAGATGGGCCAAGATCGCAAACAAATTGGGCTATCCTTCGGGTCGTAGCGTTGGGAGTATTCTGAAGAATCACTATGAGAGAATTCTCTATCCGTTCGACGTTTTTAAGCAGGGAAAAATCCTCGGACCGTTGGGTGATATAAAATTCGATACGGAGCCAGAGTTCCCGGAGAAGAAGGATCGCGATTACAAGCCGCACGGTATAATATCGCGACAGCAGATAAAGCCACCGCCTGCAAAATTTTCGCGTCGTTCGAAGCGTTTCGCCGGGGAGGAGAAGCAACAGGAATTGGGTACGATCAAGCAAGAGGATTGCAAAGACGAGTGCGATTCGGATCCGGATTGCAAGGAGGGAGTGTTTTTGAAGCGCGACATAGAGGATCCCGATGACAAGGACAACAGCAAGGAACTCAAGAAGCTACAATTTTACGGGCCTGGACCAAAGATGGCGGGTTTCAATACCAAAGAAGGTGGCAAAAAGTCGGCCAAGACACGAGGCGTCAAGCTCACGTACGACTTCGATCCGCTCGCCAAGTATATTTGTCACAATTGCGGACGCGGCGACATGGAGGAGAGTATGCTGCTCTGTGACGGTTGCGACGACAGTTATCACACGTTTTGCCTGTTGCCGCCGTTGACCGAGATCCCAAAAGGCGATTGGCGTTGTCCAAAATGCGTCGCCGAGGAAGTCTCCAAGCCAATGGAGGCTTTCGGCTTCGAGCAGGCACAGCGTGAATACACGTTGCAGCAATTTGGCGAAATGGCCGATCAGTTCAAGAGCGATTATTTCAACATGCCCGTTCACATGGTACCCACGTCACTCGTGGAGAAAGAATTTTGGCGAATCGTATCGTCCATCGACGAAGACGTCACCGTCGAGTACGGCGCTGATCTTCATACCATGGATCACGGTTCTGGCTTTCCAACGAAAACCAGCGTCAATTTATTCACGTGCGATCAAGAGTATGCCGAGTCAGCTTGGAATTTGAACAATTTGCCGGTACTTGAAGGCAGCGTTTTGGGACATATTAATGCCGATATAAGCGGCATGAAAGTACCGTGGATGTACGTTGGCATGTGTTTCGCTACGTTTTGCTGGCACAACGAGGATCATTGGAGCTACTCGATCAATTATTTGCACTGGGGCGAACCGAAAACTTGGTACGGTGTGCCAGGCGCCGAAGCCGAGAAATTTGAACACTCCATGAAGTCCGCAGCACCCGAACTCTTTCACAGTCAACCTGATCTTTTGCATCAGCTCGTTACCATCATGAATCCAACGATTCTCACGAACGAAGgtgTCCCAGTATTTCGAACGGATCAGCACGCGGGTGAATTCGTCGTCACGTTTCCGCGAGCTTACCACGCCGGTTTCAATCAAGGCTACAACTTTGCGGAAGCTGTCAATTTCGCTCCAGCCGATTGGCTAAGAGTTGGCCGCGATTGCATCTCGCACTATTCGAATTTGCGTCGTTTCTGCGTATTCTCGCACGACGAGTTGGTCTGCAAAATGTCACTCGACCCGGACGCTCTCGACATCGGCATAGCCGCCGCTACCTATCAGGATATGCTGCAGATGGTCGACGACGAGAAGAAGCTGCGGAAAAATTTACTCGAATGGGGAGTGACGGAAGCGGAGAGAGAAGCCTTTGAGCTACTGCCGGACGATGAAAGACAATGCGAGGCCTGCAAAACAACGTGCTTCCTTAGTGCAGTGACCTGCTCGTGCCACAGCTCGCAACTGGTTTGCCTAAGGCACTTTACCGAACTGTGCACCTGTCCGCCCGATAAACACACATTGCGCTATCGTTACACCCTCGACGAATTGCCCATCATGTTGCAAAAGTTGAAACTCAAGGCCGAGTCCTTCGACTCTTGGGTCTCCAAAGTCAAGGAGGCCATGGATCCCAAGGGCGAGAAGATCGAACTTACCGAACTCAAGGATCTGCTGAACGAGGCCGAGAGCAAAAAATTCCCCGACAGCGAACTTCTCACCGCCCTAACAACCGCTGTGCAGGATGCCGAGAAGTGCGCCAGCGTCGCTCAACAGCTGTTGAACAACAAGCAGCGCACGAGGACCAGACAATCCGTCGATACCAAATACAAACTGACGGTCGAAGAGCTCACGCTGTTCTACAAAGAGATAACGAATTTGTGCTGCGAGCTTAAAGAGTCGGACGGCGTTAAGTACATACTCGATCAGGTGGTACAATTTCAAAAGGACGCCGAGGAATTCGAGACTAAGATGGGCGAGGATTGCGATCTTGCGAAGCTCGAGAAGTGCATAGACTTCGGTGATTCGATATGCATCGAGTTGCCACAATTGGCGCGTTTGAAGCAAAAGTTGAGTCAGATACAGTGGCTCGAGGAGGTGCGATCGATGCAGGAAGATTCGAAGTCAATAACCCGCGAGGACGTTGCTAAATTGTCGGAGAAGGGTATGCTGATACCACCACATTACAGTATCGAGAATATGCTCTCGAAGCTGCAAGAATTAATGGCGAGTATCGACGCGTGGGAGGAAAAAGCAAAGGTACATCTTAACTCGAAGAATCGACAGAACATCGTCGCGATTGAGGAAGTTGTCCAGGAAGCTGACGAAATCGACGCCTATTTACCGAGCCTCGACAGTCTACAGGACATTCTTACAAAGGCGAAGAATTGGACGAAAAACGTCGAGGAGATACAGGCCCGTGAAAATTTTCCCTATTACGACACACTCGACGATCTCGTGCGTAAAGGACGCAACATTCCGTTACATCTCGATGCTCTACCGATGCTCGAATCCACTCTTTCACAAGCCAAAGTCTGGAAAGAACGAACAGCGAgaacatttttacgaaaaaattcgCACTACACACTGATGGAGGCACTTTCGCCGCGCATAGGCGTCGGTGTTCAAGCTTTAAAAACTAAAAAGAACAAGGGTGACGAGAGTATCGGTGCTGTGTTCGTTTGCGATACCAAACTCGACGACAGCAGCGAATCGGCCGACGTTGTCGCGGCTTTCAAACTTGCCGAGCAACGCGAGATGGAGGCTATGAGGAATTTACGAGAGAGAAATATCGTAAAAGCGAGCCTCGAACACTCGAGGTATTGCGTCTGCAGGAGACCGAGGTTCGGCCTTATGCTTCAGTGCGAATTGTGCAAGGATTGGTTTCATTCCAACTGCGTGCCACTTCCAAAGACCATGTACAAAGGCAAAGTACCGACGAGCcgcgaaacaaaatttctgtgtCCCTGCTGCTTGAGATCGAGAAGGCCAAGGCTCGAGACTATACTCGCGTTACTCGTGAGTCTACAAAAAATTCCAATACGCTTGCCGGAAGGCGAGGCCCTTCAGTGTCTGACGGAACGCGCAATGAATTGGCAAGATCGCGCGAGGCAAGCTCTCGCGACCGACGAGATAAGCGGCGTACTCACGAAATTGTCCGTACTCTCGCAAAAACTCGTCGAAGCTGCCGCACgcgaaaaaaccgagaaaatcaTAAGCAGCGAGTTAAAGAAAGCGGCGAATAATCCGGAACTCCATCAACGAGTACAAGCTATCGCGCCGCTCAGCGGTGTTCACTCGGACGACAGTGTTCTCAGTACGGCGGATGACGACGATGACGTGGTGACGATCGACGGTGACGAACCAACCTGCAGCACCTTCAACAGTAGCGAGCACGCTTATTCCTATGTATCGAAATTccaacgaaaaacgcaatctcAAAACTCGGAAGCTTCCGTAGTATTGTCGGAGAACGCGAGAACGCGGTTAGAGGAGCTCATGATGGAGGGTGATCTACTCGAGGTTGCGCTTGACGAGACACAGCACATATGGCGAATTCTCAGTCACACGAACAGCCCGAGCAGCGTCCGGAAGTACGCGGCATTCGAGGAGGTCCAGTCGAATCTCAATAGCGACATCAAGGACGTCAAGAAGCGCGGCAGAAAGAGAAAGTCCGACGAATTTGAAATGATGAAAAAACTCGGCAGGCAAAAGGTCGACGAGAAGAGTCCACCGAACGTCGTCAAGCGCAAAGGCTTCAATAACAAGGAGAAAAAGATCGTGACGACTGCGGCGACGACGGCGACCGCGACAACGACGCCCGGGGCATTGAAGCGGGGTCCGAGAAAGATGAAACGAAAGGAGGGCGAGGAGCTGCCGAAGAAGCGCGGTGGTAACAGAAAGAAAACGAAGCAGGACACGTCGGACGAGGAGGACGATTGTGCGGCGGTCAGTTGTCTTCGACCGAGCGGCCGAGAAGTCGATTGGGTGCAGTGCGACGGTGGCTGCGACGGTTGGTTCCACATGCACTGCGTCGGTCTGGACCGAGCGGAGATCGCCGAGGAGGACGATTACATATGCAGCAATTGCAAAGATCCCGATCAAAATGCAACGTCGCGAGATGCCGATCCTCACGACGATGAATCATTAGGCCTGGATGCACTTCTTTCACTTTCTCAGTCCCAGGGATACCACAGCGCCGACACCGAGCCGGAAATTTTGGAAGCTACGTCCTTCGTCAGGACCTACTAG
Protein Sequence
MVSKLDVNIGCEPARFATTITTTTSVTATTATNTTTSTITTRQQNTNRALNKSSKDTSPAKQQAMDNNKQTSRVSAKDTGDRSESDFEFGIPPEAPVFEPTAEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTEEGGIENVTRERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKILGPLGDIKFDTEPEFPEKKDRDYKPHGIISRQQIKPPPAKFSRRSKRFAGEEKQQELGTIKQEDCKDECDSDPDCKEGVFLKRDIEDPDDKDNSKELKKLQFYGPGPKMAGFNTKEGGKKSAKTRGVKLTYDFDPLAKYICHNCGRGDMEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESAWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGAEAEKFEHSMKSAAPELFHSQPDLLHQLVTIMNPTILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRVGRDCISHYSNLRRFCVFSHDELVCKMSLDPDALDIGIAAATYQDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHFTELCTCPPDKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKGEKIELTELKDLLNEAESKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEEFETKMGEDCDLAKLEKCIDFGDSICIELPQLARLKQKLSQIQWLEEVRSMQEDSKSITREDVAKLSEKGMLIPPHYSIENMLSKLQELMASIDAWEEKAKVHLNSKNRQNIVAIEEVVQEADEIDAYLPSLDSLQDILTKAKNWTKNVEEIQARENFPYYDTLDDLVRKGRNIPLHLDALPMLESTLSQAKVWKERTARTFLRKNSHYTLMEALSPRIGVGVQALKTKKNKGDESIGAVFVCDTKLDDSSESADVVAAFKLAEQREMEAMRNLRERNIVKASLEHSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTMYKGKVPTSRETKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDEISGVLTKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSVLSTADDDDDVVTIDGDEPTCSTFNSSEHAYSYVSKFQRKTQSQNSEASVVLSENARTRLEELMMEGDLLEVALDETQHIWRILSHTNSPSSVRKYAAFEEVQSNLNSDIKDVKKRGRKRKSDEFEMMKKLGRQKVDEKSPPNVVKRKGFNNKEKKIVTTAATTATATTTPGALKRGPRKMKRKEGEELPKKRGGNRKKTKQDTSDEEDDCAAVSCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRAEIAEEDDYICSNCKDPDQNATSRDADPHDDESLGLDALLSLSQSQGYHSADTEPEILEATSFVRTY