Basic Information

Gene Symbol
KDM5A
Assembly
GCA_963932165.1
Location
OZ010640.1:14873339-14893253[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.4e-25 8.4e-22 77.7 0.0 2 89 152 235 151 235 0.94
2 2 4.8 1.2e+04 -2.9 0.1 49 81 888 918 885 922 0.64

Sequence Information

Coding Sequence
ATGGTCTCGCGGCCCGACGCGAACATCGGCTGCGCGGCTGCTGCGAGGCtgctgacgacgacgacgacgacgacgacgagcccaCAGGGCCAGAATCGAGGCCAGAATCAGCatcgacaacaacaacagcaacagcagcagcatcctTGCCGGAACGccagcgcgacgacgacgacgacgacgacgacgacgacgagagacatGGGGGACAGGAGCGACTCGGACTTCGAGTTCGGGATACCGCCGGAGGCCCCGGTGTTCGAGCCCACCGCCGAGGAGTTCCTCGATCCGCTCGGCTACATCGCCAAGATTCGCCCGATCGCCGAGAAATCGGGAATCTGCAAGATCAAACCGCCGCCAAACTGGCAGCCACCGTTCGCCGTGGACGTCGACAAATTCAAATTCGTCCCGAGGATACAGAGGCTAAACGAGCTCGAGGCGAAGACGCGGATAAAGCTCAATTTTTTAGATCAAATAGCGAAATTCTGGGAGCTTCAAGGATCCTCGCTGAAGATTCCGCTGGTCGAGCGGAAGGCGTTGGATCTCTACTCGCTGCATCGAATCGTCACCGACGAAGGTGGAATAGACCACGTGACGCGCGAGAGGAGATGGGCCAAGATCGCCAACAAACTGGGCTACCCGTCGGGCCGGAGCGTCGGGAGTATTTTGAAGAATCACTACGAGAGAATTCTGTATCCCTTCGACGTCTTCAAGCAGGGAAAAACCCTCGGCCCCCTGGGCGACATTAAATTCGAGGCCGAGCCGGAGCAGAACGAGAAGAAGGACCGCGACTACAAGCCTCACGGGATAATCTCGCGGCAGCAGATAAAACCACCGCCAGCGAAATTTTCTCGTCGTTCAAAGCGTTTCGCGGGCGAGGACAGATCGCAGGACGCCGGTGGAGTCGGCTCGATAAAGCAGGAGGACTGCAAGGATGAGTGCGACTCGGACACGGACTGCAAGCCGGACGTGGCGGCGAAAGGCGGCCCGAAGGAGGACCCGGACGACAAGGACAACAGCAAGGAGCTCAAGAAGCTCCAGTTTTACGGCCCCGGCCCGAAAATGGCCGGTTTCCAAAATACCAAAgacggcggaggcggcggcggcggaggcggcggaggagggaaaaaagccGCGAAAACACGGGGAGTCAAACTCACGTACGACTTCGATCCTCTCGCCAAGTACATCTGCCACAATTGCGGCAGGGGCGACATGGAGGAGAGCATGTTGCTCTGCGACGGTTGCGACGACAGTTATCACACGTTCTgcctgctgccgccgctcaCGGAGATCCCGAAGGGCGACTGGAGGTGCCCGAAATGCGTCGCCGAGGAGGTTTCCAAACCCATGGAGGCCTTTGGATTCGAGCAGGCGCAGCGGGAATACACGTTGCAACAATTCGGAGAGATGGCTGATCAGTTTAagAGCGACTACTTCAACATGCCGGTCCACATGGTGCCGACGTCGCTGGTCGAGAAGGAATTCTGGCGGATCGTCTCGTCGATCGACGAGGACGTTACGGTCGAGTACGGCGCGGATTTGCACACGATGGATCACGGCTCCGGGTTTCCCACGAAAACCAGCGTGAATCTCTTCACCTGCGATCAGGAGTACGCGGAGTCCGCGTGGAACTTGAACAATCTGCCGGTTCTCGAGGGCAGCGTTCTCGGGCACATAAACGCCGACATTAGCGGCATGAAGGTGCCGTGGATGTACGTCGGCATGTGCTTCGCGACCTTCTGCTGGCACAACGAGGATCACTGGAGCTACTCGATCAATTATCTTCACTGGGGCGAGCCGAAAACGTGGTACGGGGTTCCCGGGTCGGAGGCCGAGAGGTTCGAAGTCTCCATGAAGTCAGCCGCGCCTGAGCTGTTTCACAGTCAGCCGGATCTCTTGCATCAGCTCGTGACGATTATGAATCCGACTATTCTGACGAATGAAGGTGTTCCGGTGTTTCGGACGGATCAGCACGCCGGGGAATTTGTGGTGACGTTTCCGCGAGCTTATCACGCGGGTTTCAACCAGGGCTACAACTTCGCCGAGGCTGTGAACTTCGCGCCGGCCGATTGGCTCAAGGTTGGCCGCGACTGCATCTCGCACTACTCAAATCTCCGACGTTTTTGCGTCTTCTCGCACGACGAGCTCGTTTGCAAAATGTCTTTGGACCCGGACGCCCTCGACATCGGCATCGCCACCGCGACCTATCAGGACATGCTGCAGATGGTCGACGACGAGAAGAAACTGCGAAAAAATCTCCTGGAGTGGGGCGTTACAGAGGCGGAGAGAGAGGCTTTCGAGCTGCTGCCCGACGATGAGAGACAGTGCGAGGCGTGCAAAACGACGTGCTTTCTGAGCGCGGTGACTTGTTCGTGCCACAGTTCGCAATTGGTTTGCCTGAGGCACTTCACCGATCTCTGCAGCTGTTCCCCCGAGAAGCACACCCTTCGCTACCGCTACACCCTAGACGAGCTGCCGATCATGTTGCAAAAGTTGAAACTCAAGGCGGAGTCCTTCGACTCGTGGGTGTCCAAGGTCAAGGAGGCCATGGATCCCAAAGTCGAGAAGATCGAGCTCACCGAACTGAAGGACCTGCTGAGCGAGgccgaaagtaaaaaattcccCGACAGCGAACTCCTCACCGCCCTCACCACTGCGGTTCAGGACGCCGAGAAGTGCGCCAGCGTAGCGCAGCAGCTGTTGAACAACAAGCAGCGCACGAGGACCCGGCAATCGGTCGACACCAAGTACAAACTGACGGTCGAGGAGCTGACGCTTTTCTACAAGGAGATCACGAATCTGTGCTGCGAGTTGAAGGAGTCGGACGGCGTGAAATACATCCTGGATCAGGTGGTGCAGTTTCAGAAGGACGCGGAGGATCTTGAGACGAAAAACGGCGAGGACTGCGACATCGAGAAGCTCGAGAAGTGCATCGACTTCGGGGACTCGATATGCATAGAGCTGCCGCAGCTGGTGCGGCTGAAGCAGAAATTGAGTCAGATCCAGTGGCTGGACGAGGTGAAGTCGATGCAGGAGGACTCGAAGTCGATAACGCGCGAGGACGTCGCCAAACTGGCGGACAAGGGAATGACGATTCCCCCGCATTTCAGCGTGGAAAATATGCTCTCGAAGCTCCAGCAGCTGATGATCAGCATCGACACGTGGGAGGACAAGGCGAAGGTTCATTTGAACTCGAAGAATCGGCAGAACATCGCCGTGATCGAGGAGTTCGTGCAGGAGGCCGACGAAATCGACGCATACCTGCCGAGCCTCGACGGCCTCCAGGATATTCTCACCAAGGCGAAGAACTGGACGAAGACCGTGGAGGAAATTCAGGCTCGCGAGAATTTCCCCTACTACGATACCCTCGACGATCTTGTACGGAAGGGCAGAAACATTCCGCTGCACCTCGACGCTCTACCGATGCTCGAGTCTACGCTCTCACAGGCCAAAGTATGGAAGGAAAGAACGGCGAGAACTTTCCTGCGAAAGAACTCGCACTACACACTCATGGAGGCGCTGTCGCCGCGAATCGGCGTCGGGGTTCAGGCCctgaagacgaagaagaacaAGGGCGACGAGAGCATCGGCGCGGTTTTCGTCTGCGACACGAAACTCGACGATTCGAGCGAGTCGGCCGACGTCGTGGCGGCTTTCAAATTGGCGGAACAGCGCGAAATGGAAGCCATGAGAAATCTGAGGGAGAGAAATCTGGTGAAAGCGAGCATGGACGACTCGAGGTACTGCGTCTGCCGAAGACCCAGGTTCGGGCTGATGCTGCAGTGCGAACTTTGCAAGGATTGGTTTCACTCGAATTGCGTGCCTCTGCCAAAGACGATGTACAAAGGCAAAGTGCCGTCGGTCCGGGAGACGAAGTTCCTGTGCCCGTGCTGCCTGCGATCGCGGAGGCCGCGGCTCGAGACGATCCTCGCGCTTCTGGTCAGCCTGCAGAAAATTCCAGTCCGACTGCCGGAGGGCGAGGCGCTCCAGTGTCTCACCGAGCGGGCGATGAACTGGCAGGATCGAGCGAGGCAAGCCCTCGCGACCGACGAGATAAACACGGTACTAGCGAAATTGTCTGTACTATCGCAGAAACTCGTCGAGGCCGCGGCGCGGGAGAAGACGGAGAAGATAATAAGCAGCGAGCTCAAGAAGGCCGCCAACAATCCCGAGCTTCATCAGCGCGTTCAGGCGATCGCCCCACTCAGCGGAGTTCTGTCCGACGACAGCGTTCTCAGCGCGGCTgacgacgacgacgacgtcgttaCGATCGACGGCGACGAACCCACCTGCAGCACCTTCAACAACAGCGAACACGCATATTCCTATGTATCGAAATCCCAACGAAAATCGCAATCTCAAAACCCGGAGACTTCCGTAGTGCTGTCGGAGAGCGCGAGAACGCGGTTAGAGGAGCTCATGATGGAGGGCGACCTGCTCGAGGTGGCGCTCGACGAGACGCAGCACATATGGCGAATCCTGAGCCACACGAACAGCCCGAGCAGCGTGCGGAAGTACGCGGCGTTCGAGGAGGTCCAGGCGAGCCTGAATTGCGACGCGAAGGACGCGAAGAAGCGGGGCCGAAAGCGAAAGTCCGAGGAGTTCGAGCTGTCGCGGAAGCTCGGCAAGCCGAAGGTCGACGACAAGAACATCGTAAAGCGCAAGGGATTCGTCAGCAAGGAGAAGAAGGTCGTCACGGCGCCGCCGGCGACGGCGCCGGGACCGCTCAAACGCGGCCCCCGAAAGATGAAACggaaggagggggaggagcAGCAGCTGCCGAAGAAACGCGGCGGGAACAGGAAGAAGACCAAGCAGGACACGtccgacgaggaggacgactgCGCCGCGGTTAATTGTCTGCGACCCAGTGGTCGGGAGGTGGATTGGGTGCAGTGCGACGGCGGCTGCGACGGTTGGTTCCACATGCACTGCGTCGGCCTGGACAGAACGGAGATCGCCGAGGAGGACGACTACATATGCAGCAACTGCAAAGATCCCGACCAAAACGCAACGTCGCGAGATGCCGATCCGCTCGCAGAATCATTAGGCCTGGATGCACTTCTTTCCCTTTCTCAGTCCCAGGGATACCACAGCGCGGACACGGATCCGGACATTCAGGAGGTGTCGTCGTTCGTGCGGACGTACTAA
Protein Sequence
MVSRPDANIGCAAAARLLTTTTTTTTSPQGQNRGQNQHRQQQQQQQQHPCRNASATTTTTTTTTTRDMGDRSDSDFEFGIPPEAPVFEPTAEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTDEGGIDHVTRERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLGPLGDIKFEAEPEQNEKKDRDYKPHGIISRQQIKPPPAKFSRRSKRFAGEDRSQDAGGVGSIKQEDCKDECDSDTDCKPDVAAKGGPKEDPDDKDNSKELKKLQFYGPGPKMAGFQNTKDGGGGGGGGGGGGKKAAKTRGVKLTYDFDPLAKYICHNCGRGDMEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESAWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSEAERFEVSMKSAAPELFHSQPDLLHQLVTIMNPTILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKVGRDCISHYSNLRRFCVFSHDELVCKMSLDPDALDIGIATATYQDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHFTDLCSCSPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKVEKIELTELKDLLSEAESKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEDLETKNGEDCDIEKLEKCIDFGDSICIELPQLVRLKQKLSQIQWLDEVKSMQEDSKSITREDVAKLADKGMTIPPHFSVENMLSKLQQLMISIDTWEDKAKVHLNSKNRQNIAVIEEFVQEADEIDAYLPSLDGLQDILTKAKNWTKTVEEIQARENFPYYDTLDDLVRKGRNIPLHLDALPMLESTLSQAKVWKERTARTFLRKNSHYTLMEALSPRIGVGVQALKTKKNKGDESIGAVFVCDTKLDDSSESADVVAAFKLAEQREMEAMRNLRERNLVKASMDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTMYKGKVPSVRETKFLCPCCLRSRRPRLETILALLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALATDEINTVLAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVLSDDSVLSAADDDDDVVTIDGDEPTCSTFNNSEHAYSYVSKSQRKSQSQNPETSVVLSESARTRLEELMMEGDLLEVALDETQHIWRILSHTNSPSSVRKYAAFEEVQASLNCDAKDAKKRGRKRKSEEFELSRKLGKPKVDDKNIVKRKGFVSKEKKVVTAPPATAPGPLKRGPRKMKRKEGEEQQLPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRTEIAEEDDYICSNCKDPDQNATSRDADPLAESLGLDALLSLSQSQGYHSADTDPDIQEVSSFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2