Basic Information

Gene Symbol
KDM5A
Assembly
GCA_017141405.1
Location
JADHZF010000034.1:2318825-2335355[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.5e-25 7.8e-22 78.2 0.0 2 89 104 187 103 187 0.94
2 2 2.2 1.1e+04 -2.4 0.1 49 82 807 838 804 843 0.66

Sequence Information

Coding Sequence
ATGGGGTCCAAGGTGGATGGCAACATGGACAACACGAGATTGAAAACTGGAATGGGGCCCAATGGATGTAATGAAGCGGATTTTGAATTTGGCATTCCACCTGAGGCGCCTGTTTTTGAACCCACACCTGAAGAGTTTTTGGATCCTTTGGGGTATATTGCTAAAATTCGACCAATTGCGGAAAAGTCTGGCATATGCAAGATCAAACCACCACCCAATTGGCAGCCACCATTTGCAGTTGATGTCGACAAATTCAAATTCACACCTAGAATTCAGAGACTTAACGAATTGGAGGCGAAGACGCGGATCAAATTGAATTTTCTGGATCAAATCGCCAAGTTTTGGGAGTTGCAGGGCTCGTCCTTGAAGATCCCTTTAGTGGAGAGGAAGGCACTTGATCTATACTCGTTACACAAAATTGTGACTGATGAAGGCGGCATTGAAACCGTTACAAGGGAGCGTAGATGGGCGAAAATCGCCAACAAGTTGGGCTACCCATCGGGCCGAAGTGTTGGCAGTATTCTGAAGAATCATTATGAGAGAATTCTCTATCCATTCGACGTGTTTAAGCAAGGCAAGACCCTGAGTGATATTAAGATTGAGCCTGAACCAGAGGTCAACGAGAAGAAGGATCGCGATTACAAGCCCCATGGAATAATCTCGCGGCAGCAGATAAAACCTCCTCCAGAGAAATTTTCCAGGCGGTCAAAGCGATTCGGGGGTGCTGACGACAAGCAGGATGTTGCCATTAAACAGGAGGACTGTAAAGAAGAATGCGACTCTGATGATTGCAAGGACGACATTGATTCCGATAGCAAGGAGCTTAAGAAGCTACAATTTTATGGGGCTGGACCCAAAATGGCGGGCTTTACCAAAGAGAACAAAAAAGCGAATAAGACCCGCGGTATAAAACAGAATTACGATTACGACCCGCTGGCCAAATACATCTGTCACAACTGTGGTCGAGGTGACATGGAGGAGAGTATGCTCCTTTGTGACGGCTGCGACGATAGTTACCACACATTTTGCCTCCTTCCACCTTTAACAGAGATCCCCAAAGGCGACTGGCGTTGTCCAAAATGCGTCGCAGAAGAAGTATCAAAACCGATGGAGGCCTTTGGCTTCGAGCAAGCGCAAAGGGAGTACACACTCCAGCAATTTGGTGAAATGGCGGATCAATTTAAAAGCGATTATTTCAATATGCCCGTACACATGGTTCCTACATCACTTGTAGAAAAGGAATTTTGGCGAATTGTTTCGTCCATTGATGAAGATGTTACTGTGGAGTATGGTGCAGATTTGCACACCATGGATCACGGATCTGGTTTTCCAACGAAAACCAGTGTCAATTTGTTTACGTGTGATCAGGAATATGCAGAGTCGGCGTGGAATTTGAACAATCTTCCAGTTCTTCAAGGGAGCGTTTTGGGGCATATCAATGCCGACATCAGTGGTATGAAGGTCCCTTGGATGTATGTGGGAATGTGCTTCGCCACTTTCTGCTGGCACAACGAGGATCACTGGAGCTATTCTATCAATTATCTGCATTGGGGTGAACCCAAGACCTGGTATGGTGTGCCTGGATCAGAGGCAGAGAGGTTTGAGCATTCAATGAAATCAGCTGCGCCCGAGCTCTTCCATAGTCAACCCGATCTGTTGCACCAACTTGTAACCATCATGAATCCAACAATTTTGACAAATGCTGCCGTCCCAGTATTTAGGACCGACCAGCACGCCGGCGAATTCGTTGTAACTTTTCCCCGCGCTTACCATGCGGGTTTCAATCAGGGCTACAACTTTGCTGAAGCAGTCAACTTCGCTCCAGCCGATTGGCTGAAAATGGGTAGGGAGTGCGTCGCCCATTATTCCAATCTTCGACGATTCTGTGTCTTCTCTCACGATGAGCTGGTCTGCAAAATGTCCCTGGATCCGGATTCCCTGGACATAGGAATCGCCACATCAACTTATCAAGATATGTTACAAATGGTCGAGGACGAGAAAAAATTGAGAAAAAATCTGCTTGAGTGGGGTGTAACCGAGGCAGAACGTGAGGCGTTTGAGCTTCTTCCAGACGATGAGCGCCAGTGTGAGGCCTGCAAAACTACTTGTTTCCTGAGCGCCGTCACCTGCTCGTGTCACACATCCCAATTGGTATGTCTCCGTCATTTTACTGATCTCTGCTCCTGCCCACCTGCCAAACACACTCTACGATATCGCTACACTTTGGACGAGCTCCCCATAATGTTGCAGAAACTGAAACTCAAGGCTGAGTCCTTCGACTCATGGGTCTCCAAGGTCAAAGAGGCCATGGACCCGAAGGCCGAAAAAATTGAGCTTACCGAACTTAAGGAACTCCTGAGCGAAGCAGAAAGCAAAAAATTCCCAGAAAGTGAACTCTTGACAGCTCTAACCACAGCGGTTCAAGATGCTGAAAAATGCGCAAGTGTTGCGCAACAATTACTTAATAACAAACAACGAACACGCACGCGACAATCCGTCGATACGAAATACAAACTCACAATCGAGGAGTTGACACTTTTTTATAAAGAAATAACAAATTTGTGTTGTGAGCTGAAGGAGTCGGATGGGGTTAAGTATATTTTGGATCAAGTTGTGCAATTCCAGAAGGACTCGGAGGAGCTACAAGCCAAATTCGATGATTGCAATGTTGAAAAATTGGAGAAGTGCATTGACTTTGGGGACTCTATCTGTATTGAGTTGCCCCAGCTGGTGAGGCTGAAGCAGAAGCTGAGTCAGATCCAGTGGTTAGACGAGGTGAAATCCATGCTAGATGATTCCAAGTCTGTCACCCGAGAAGACCTGGCTCGTCTGATCGAGACAGGAATGACAATTCCCCCTCACTTCAGTATCGAGACGATGCTCTCGAAACTCCAGCAGCTAGTGATAAACATCGATAAATGGGAGGAAAAGGCTAAGGGCTGCCTTCAATCCAAGACCCGTCAAAATATCGTGATGATCGAAGAGTTCATTCAAGAAGCAGACGCCATCGAGGCCTATCTTCCCAGCCTCGACAATCTCCAAGACATCTTAACAAAAACTAAGAATTGGACCAAAACCGTCGAAGAAGTTCAGGCTCGGGATAATTTTCCATATTACGATACCCTGGACGATCTAGTTAAAAAAGGGAGAAACATTCCGTTGCATTTGGACGCTTTACCAGTTCTGGAGTCCACGATTTCTCAGGCGAAAGTCTGGAAGGAGAGGACTGCGCGGACCTTTCTTAGGAAGAATTCTCATTACACTTTGATGGAAGCCCTATCCCCTAGGATCGGGGTCGGGGTTCAGGCCCTCAAGACCAAGAAGAATAAAGGAGAGGAGACCATTGGGGCTGTTTTTGTCTGCGATACCAGACTTGATGATTCTAGTGATTCCGCTAATGTTGTCGCCGCCTTCAAACTCGCGGAACAGCGGGAGATGGAAGCAATGCGTAATTTGAGGGAGAGGAACATACTTAAAGCCGGATTTGAGGACTCTAGGTATTGTGTTTGCCGACGTCCTAGGTTTGGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACTACCAAAGACCATGTACAAGGGCAAAGTGGCTTCCAGCAGAGAAACAAAATTCCTTTGCCCATGTTGTCTACGAAGTCGTAGACCTCGCTTAGAAACGATCCTAGCATTATTAGTTTCCCTGCAAAAAATTCCGATCAGATTGCCCGAGGGCGAGGCCCTTCAGTGCCTCACAGAAAGGGCAATGAATTGGCAGGACAGAGCTAGGCAAGCTCTAGGAACAGAGGAAATATCCTCAGTTCTTTCTAAATTGTCTGTTTTGTCCCAGAAACTCGTGGAGGCTGCTGCACGTGAAAAAACAGAGAAAATAATCAGCAGTGAACTGAAAAAAGCTGCGAACAATCCAGAACTCCATCAGAGGGTCCAAGCTATTGCTCCTCTGAGTGGTGTTCACTCTGATGATAGTGTTTTGAGTGCGGAGGAGGAAGAGGAGGCAGGGGAAGGGGATGAGCCATCTTGCAGTACCTTCAACAGCAGTGAGCACGCATACTCGTATGTTTCAAAATTCCAGAGGAAATTGTTATCTCCACAAAGTCCAGAGCACTCAGTAGTGATTTCTGAGAGTGCGAGGGGCAAATTGGACGAGCTGATGATGGAGGGTGATCTCCTCGAGGTTGCCCTGGACGAAACCCAGCATATTTGGAGGATTTTGAGTCATACGAATAGTCCAAGTAGTGTGCGCAAATACGCAGCATTTGAGGAAGTTCAAGCGAATTTTGCAGAGGGAAAGGATCCCAAAAAGCGGGGGCGAAAGAGAAAATCTGAGGAGTTTGAAATGCTGAAGAAAATGGGAAATAAAAAACCCGAGGATAAGACTTTGCTAAAGAAGAAACCTTTTGCAGCGAAGGAAGGAAAAAAAGTTGTGACTCCACAAGGGGGACTCAAGCGTGGACCCAGGAAGATAAAACGAAAAGAGGGGGAGGAACCTCTGAAAAAGAGGGGGGGTAACAGAAAAAAAACTAAGCAAGACACTTCTGACGAGGAGGATGATTGTGCCGCGGGAAATTGCCTGCGACCAAGTGGACGCGAAGTCGACTGGGTGCAGTGTGACGGTGGCTGTGACGGTTGGTTCCACATGCACTGCGTGGGCCTGGACCGTACTGAGCTTACCGAAGAGGACGACTACATATGCAGTAATTGCAAAGACGCCGAACAGAGTGCAGCGGGATATCTCAGTGGTGACAATGAGCCGGAAATCCAGGAGACGGCCTTCGGTAGGACCTACTAG
Protein Sequence
MGSKVDGNMDNTRLKTGMGPNGCNEADFEFGIPPEAPVFEPTPEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIETVTRERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLSDIKIEPEPEVNEKKDRDYKPHGIISRQQIKPPPEKFSRRSKRFGGADDKQDVAIKQEDCKEECDSDDCKDDIDSDSKELKKLQFYGAGPKMAGFTKENKKANKTRGIKQNYDYDPLAKYICHNCGRGDMEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESAWNLNNLPVLQGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSEAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPTILTNAAVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVAHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATSTYQDMLQMVEDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHTSQLVCLRHFTDLCSCPPAKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKAEKIELTELKELLSEAESKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTIEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDSEELQAKFDDCNVEKLEKCIDFGDSICIELPQLVRLKQKLSQIQWLDEVKSMLDDSKSVTREDLARLIETGMTIPPHFSIETMLSKLQQLVINIDKWEEKAKGCLQSKTRQNIVMIEEFIQEADAIEAYLPSLDNLQDILTKTKNWTKTVEEVQARDNFPYYDTLDDLVKKGRNIPLHLDALPVLESTISQAKVWKERTARTFLRKNSHYTLMEALSPRIGVGVQALKTKKNKGEETIGAVFVCDTRLDDSSDSANVVAAFKLAEQREMEAMRNLRERNILKAGFEDSRYCVCRRPRFGLXXXXXXXXXXXXXXXXPLPKTMYKGKVASSRETKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALGTEEISSVLSKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSVLSAEEEEEAGEGDEPSCSTFNSSEHAYSYVSKFQRKLLSPQSPEHSVVISESARGKLDELMMEGDLLEVALDETQHIWRILSHTNSPSSVRKYAAFEEVQANFAEGKDPKKRGRKRKSEEFEMLKKMGNKKPEDKTLLKKKPFAAKEGKKVVTPQGGLKRGPRKIKRKEGEEPLKKRGGNRKKTKQDTSDEEDDCAAGNCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRTELTEEDDYICSNCKDAEQSAAGYLSGDNEPEIQETAFGRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_00728457;
80% Identity
-