Basic Information

Gene Symbol
KDM5A
Assembly
GCA_037893425.1
Location
JBBLXU010000528.1:2267045-2279873[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.3e-25 2.7e-22 79.0 0.0 2 89 158 241 157 241 0.94
2 3 4.9 1e+04 -3.0 0.1 49 81 897 927 894 931 0.64
3 3 3.7 7.5e+03 -2.6 0.0 37 54 1562 1578 1535 1602 0.57

Sequence Information

Coding Sequence
ATGGTATCGAAGCCCGATGTAAATATCGGCTCAGAGGCTTCAAGCTTTtccacgacgacgacgacgacgacgacgacgacgacgacaaccaCGCGACAACATCTCAATCGCTCCCAAACAAAAACACTCAAAGATTCGCATCAACAAccaaaacaacaacaacaacaacaacaacaaatggATACTAAAACAACGAGTCGCACTAATCTTAATAAAGATATGGGAGACAGGAGCGAATCTGATTTCGAGTTCGGAATCCCCCCTGAAGCTCCCGTCTTCGAACCCACAGCCGAAGAGTTCCTCGATCCTCTCGGTTACATCGCTAAAATACGACCGATCGCTGAAAAATCCGGAATATGCAAGATCAAACCGCCACCCAACTGGCAGCCTCCCTTTGCAGTGGACGTTGACAAGTTCAAATTCGTTCCGAGGATACAGAGACTAAACGAGCTCGAGGCTAAAACTCGaataaaactcaattttttagaTCAAATTGCGAAATTTTGGGAACTTCAAGGATCATCCCTTAAAATACCGCTCGTTGAGAGAAAAGCTTTGGATCTCTATTCTCTTCACAGAATCGTAACGGAAGAAGGTGGAATCGAAAATGTGACGCGGGAACGAAGATGGGCCAAGATAGCGAACAAATTGGGATATCCATCGGGTCGTAGCGTTGGGAGTATATTGAAGAATCATTACGAGAGAATTCTATATCCATTCGACGTTTTTAAGCAAGGAAAAACGCTTGGACCATTGGGTGATATCaaattCGAGTCCGAGACTGAATTCCCGGAAAAGAAAGATCGGGATTACAAGCCCCACGGGATAATATCTCGTCAGCAGATAAAGCCACCGCCAGCtaaattttctcgtcgttcgAAGCGTTTTGCCGGTGAGGATAAGCAACAGGATGCCGGAACGATTAAGCAGGAGGATTGTAAGGAGGAGTGCGACTCGGATACCGATTGCAAACCGACGttaaagcgagagaaagaggatcCGGATGACAAAGACAGCAAGGAGCTGAGAAAGTTACAGTTTTACGGGCCTGGTCCAAAAATGGCAGGTTTTAATACCAAAGAAGGTGGAGGCGCcggtggaggaggaggaggtggtggcggtggcggtggcggtggtggtggcggtggtggtAAAAAAGCGAACAAAACGCGAGGGGTCAAGTTGACGTACGACTTTGATCCATTGGCTAAATACATCTGTCACAATTGCGGACGAGGCGATATGGAAGAAAGCATGCTCTTGTGCGACGGTTGCGACGACAGTTATCACACTTTTTGCCTTTTGCCACCACTGACCGAGATACCGAAGGGCGATTGGCGATGTCCTAAATGCGTTGCGGAGGAAGTCTCAAAGCCGATGGAAGCATTTGGCTTTGAACAAGCCCAACGGGAATACACGCTTCAACAATTTGGCGAAATGGCCGATCAGTTTAAAAGCGATTATTTCAATATGCCTGTTCACATGGTACCGACCTCCCTCGttgagaaagaattttggCGAATAGTTTCATCGATCGACGAAGACGTAACCGTCGAATACGGTGCCGATCTTCATACGATGGATCATGGCTCTGGTTTTCCAACGAAAACGAGCGTTAATCTATTCACCTGCGACCAAGAATACGCCGAATCTGCGTGgaatttgaacaatttacCGGTTCTCGAAGGCAGTGTTCTCGGACACATAAATGCCGATATCAGTGGTATGAAAGTCCCTTGGATGTACGTCGGCATGTGCTTCGCCACATTTTGCTGGCACAACGAGGATCACTGGAGCTATTCCATCAATTATTTACACTGGGGCGAACCCAAAACTTGGTACGGTGTTCCTGGCTCTCAAGCCGAGAAATTCGAACACTCCATGAAATCCGCTGCTCCCGAACTCTTTCACAGTCAACCCGATCTGTTGCATCAACTCGTCACTATTATGAACCCAACCATTCTTACCAACGAAgGTGTTCCGGTATTCCGAACGGATCAGCACGCTGGTGAATTCGTCGTTACATTTCCACGCGCATATCACGCCGGTTTTAATCAAGGTTACAATTTTGCCGAAGCCGTTAATTTCGCTCCTGCTGATTGgCTCAAAGTCGGTCGTGATTGCATCTCTCACTACTCGAATCTCCGTCGCTTTTGTGTATTTTCTCACGACGAGTTGGTCTGCAAAATGTCCCTCGATCCAGACTCTCTTGACATCGGTATAGCCGCGGCAACTTATCAAGATATGCTGCAAATGGTTGATGACGAAAAGAAACTTCGGAAGAATTTACTTGAATGGGGAGTGACCGAAGCAGAGAGAGAAGCTTTTGAGTTGCTGCCGGACGATGAGAGGCAATGCGAGGCGTGTAAGACAACGTGTTTTCTGAGCGCAGTGACGTGCTCCTGTCACAGCTCACAATTGGTCTGTCTGCGTCATTTTACCGAACTGTGCGCTTGTTCGCCGGAGAAGCATACACTGCGCTATCGTTACACTCTTGACGAATTGCCCATTATGCTACAAAAACTTAAACTCAAGGCAGAGTCGTTTGACTCTTGGGTATCCAAAGTCAAGGAGGCCATGGATCCCaaaggagagaaaatcgaattgaCCGAACTTAAAGATTTACTCAACGAGGCGGAGAGCAAAAAATTCCCTGACAGCGAACTCCTGACCGCGCTCACTACCGCCGTTCAGGATGCTGAAAAATGCGCCAGTGTAGCTCAGCAACTTTTAAACAATAAACAACGCACGAGGACGAGGCAATCGGTCGATACCAAGTACAAGTTGACGGTCGAAGAGTTAACTCTGTTCTACAAAGAGATAACAAATTTGTGTTGCGAGCTTAAAGAATCTGACGGAGTCAAATATATACTGGATCAGGTGGTACAATTTCAGAAGGACGCGGAGGAATTTGAGACAAAGACCGGCGAGGATTGTGACCTCGTTAAATTGGAGAAATGCATAGATTTTGGTGACTCGATATGCATCGAATTGCCCCAATTGGCAAGATTGAAGCAAAAGTTGAGTCAGATACAGTGGCTGGAAGAAGTAAGATCGATGCAAGAAGATTCAAAGTCCATAACGCGCGAGGATGTTGCTAAATTGTCAGAGAAAGGTATGCTCATACCGCCGCATTACAGTATAGAAAAAATGCTTTCGAAGCTGCAAGAATTAATGACGAGCATCGATGCCTGGGAGGAAAAGGCGAAAGTTCATTTGAACTCTAAGAACCGACAAAATATCGTTGCGATCGAGGAACTAGTCCAGGAGGCTGATGATATCGACGCTTATTTGCCCAGTCTCGACAGCCTTCAAGATATTCTtacgaaagcaaaaaattggACTAAGAACGTGGAGGAGATTCAAGCGCGAGAGAATTTTCCTTATTACGACACGCTTGAGGAGCTCGTGCGTAAAGGACGCAACATTCCGCTACATCTCGATTCTCTACCGATGCTCGAATCGACTCTTTCCCAGGCTAAAGTTTGGAAGGAACGAACGGCGAGAACAttcttacgaaaaaattctcattataCCCTCATGGAAGCGCTTTCACCTCGTATCGGTGTAGGCGTTCAAGCTctcaaaaccaaaaagaataaGGGTGACGAGAGTATCGGCGCCGTATTTGTCTGCGACACGAAACTCGACGACACGAGCGAATCCGCGGATGTCGTTGCCGCTTTCAAATTAGCTGAACAACGCGAGATGGAAGCTATGAGAAATTTGAGGGAGCGAAATCTCGTAAAAGCTAGTCTCGAACACTCGAGGTATTGCGTCTGTCGAAGACCAAGGTTCGGTCTCATGCTCCAGTGCGAATTGTGCAAGGATTGGTTTCATTCCAATTGCGTACCACTTCCAAAGACCATGTACAAAGGCAAAGTACCGAACaatcgagaaacaaaattcttgTGTCCCTGTTGTCTGAGATCGAGGAGACCTCGGCTCGAGACGATCCTCGCTCTTCTTGTGAGTctacaaaaaattccaattcgCTTACCCGAAGGCGAAGCTCTGCAGTGTCTGACCGAACGTGCCATGAACTGGCAAGATCGTGCGAGACAAGCCCTCGCGACGGACGAGATAAGCACCGTACTAACCAAACTGTCAGTACTCTCGCAGAAACTCGTGGAAGCTGCTGCACgtgaaaaaactgaaaaaattataagcagcgaattgaaaaaagctgCAAATAATCCGGAACTCCATCGACGAGTTCAGGCCATTGCTCCCCTGAGTGGTGTTCACTCGGATGACAGTGTTCTCAGCACTGCCgacgatgacgacgacgtaGTGACGATCGACGGTGATGAGCCAACTTGCAGCACGTTCAACAGCAGCGAACACGCTTATTCCTATGTATCGAAATTCCAACGAAAGTCGCAATCTCAAAACTCGGAGACTTCCGTAGTACTGTCGGAGAAGGCGAGAACGCGATTAGAAGAGCTCATGATGGAGGGTGATCTGTTGGAGGTTGCTCTGGACGAGACACAGCACATATGGCGAATTCTGAGTCACACCAATAGTCCGAGCAGTGTGAGAAAGTACGCGGCGTTCGAAGAGGTCCAGTCCAATCTCAATAGTGACATAAAGGACGTGAAAAAACGTggcagaaagagaaaatctgACGAgtttgaaatgatgaaaaaattgggtcGTCAAAAAGTAGACGACAAGAGCCCATCGAGCGTCGTCAAGCGCAAAGGCGGcttaaataataaagataaaaaagttgtttctaCTACcgcgacaacgacaacgacgacgacgacgacgacaacggcGGCAGCGGCAGCGGCGACGACGACAGCAGCAACGACGACTGCGACAACACCTGGCCCGTTGAAACGCGGACCTCGAAAgATGAAGCGAAAGGAGGGCGAAGAACTGCCCAAGAAGCGTGgaggaaataggaaaaaaacgaagcaagaTACCTCGGACGAGGAGGACGATTGCGCGGCGGTCAGTTGTCTTCGACCGAGTGGCAGGGAAGTGGATTGGGTACAATGCGACGGCGGTTGCGACGGTTGGTTCCACATGCATTGCGTAGGCTTGGACAGAGCAGAAATAGCTGAGGAGGATGATTATATTTGCAGTAATTGCAAAGATCCCGATCAAAATGCGACGTCGCGAGATGCCGACCCTCGAGACGAATCATTAGGCCTGGATGCACTTCTTTCACTTTCTCAGTCCCAGGGATACCACAGCGCCGATACTGAGCCGGAAATACTGGAAACAGCCTCCTTCGTCAAGACCTACTAG
Protein Sequence
MVSKPDVNIGSEASSFSTTTTTTTTTTTTTTRQHLNRSQTKTLKDSHQQPKQQQQQQQQMDTKTTSRTNLNKDMGDRSESDFEFGIPPEAPVFEPTAEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTEEGGIENVTRERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLGPLGDIKFESETEFPEKKDRDYKPHGIISRQQIKPPPAKFSRRSKRFAGEDKQQDAGTIKQEDCKEECDSDTDCKPTLKREKEDPDDKDSKELRKLQFYGPGPKMAGFNTKEGGGAGGGGGGGGGGGGGGGGGGGKKANKTRGVKLTYDFDPLAKYICHNCGRGDMEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESAWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAEKFEHSMKSAAPELFHSQPDLLHQLVTIMNPTILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKVGRDCISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIAAATYQDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHFTELCACSPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKGEKIELTELKDLLNEAESKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEEFETKTGEDCDLVKLEKCIDFGDSICIELPQLARLKQKLSQIQWLEEVRSMQEDSKSITREDVAKLSEKGMLIPPHYSIEKMLSKLQELMTSIDAWEEKAKVHLNSKNRQNIVAIEELVQEADDIDAYLPSLDSLQDILTKAKNWTKNVEEIQARENFPYYDTLEELVRKGRNIPLHLDSLPMLESTLSQAKVWKERTARTFLRKNSHYTLMEALSPRIGVGVQALKTKKNKGDESIGAVFVCDTKLDDTSESADVVAAFKLAEQREMEAMRNLRERNLVKASLEHSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTMYKGKVPNNRETKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDEISTVLTKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHRRVQAIAPLSGVHSDDSVLSTADDDDDVVTIDGDEPTCSTFNSSEHAYSYVSKFQRKSQSQNSETSVVLSEKARTRLEELMMEGDLLEVALDETQHIWRILSHTNSPSSVRKYAAFEEVQSNLNSDIKDVKKRGRKRKSDEFEMMKKLGRQKVDDKSPSSVVKRKGGLNNKDKKVVSTTATTTTTTTTTTTAAAAAATTTAATTTATTPGPLKRGPRKMKRKEGEELPKKRGGNRKKTKQDTSDEEDDCAAVSCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRAEIAEEDDYICSNCKDPDQNATSRDADPRDESLGLDALLSLSQSQGYHSADTEPEILETASFVKTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_01129122;
80% Identity
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