Basic Information

Gene Symbol
KDM5A
Assembly
GCA_030523045.1
Location
JAPYZF010000067.1:284041-296248[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-25 3e-22 78.7 0.0 2 89 117 200 116 200 0.95
2 2 4 8.6e+03 -2.9 0.1 49 81 827 857 824 861 0.64

Sequence Information

Coding Sequence
atgGTGTCGAAAGTTGatgcaaataatattgaaagcACGAGATTTACTCGTGGTGCAAATACACGCGACATTATGGGGGAAAAGAGTACGGGCAATTGTGGTGCTAATGGTGAAACGGATTTTGAGTTTGGTGTACCACCAGAAGCGCCTGTATTTGAGCCAACTGCTGAAGAATTTTTGGATCCACTTGGGTATATCGCTAAAATACGACCAATTGCTGAAAAATCTggaatatgtaaaattaaacCACCGCCTaATTGGCAACCACCATTCGCTGTTGACGttgacaaattcaaatttgtacCGAGAATACAGAGGTTGAATGAGCTTGAAgcaaaaacaagaataaaattgaattttttagaTCAAATTGCTAAATTTTGGGAGCTTCAAGgatcatcattgaaaattccattGGTGGAGAGAAAAGCTCTAGACCTTTATTCATTACACAAAATAGTTACTGAcgaagGCGGAATTGAAACAGTCACGAGAGAACGAAGATGGGCAAAAATAGCAAACAAATTGGGCTATCCTTCGGGCAAAAGTGTTGGAAGtattttaaaaaatcattacgaaagaattttatatccatttgacGTATTCAAACAAGGAAAAACATTGggtgatattaaaattgaaccTGAAACCgaagtgaatgagaaaaaagatcGTGATTATAAGCCGCACGGTATTATATCACGACAGCAAATAAAACCACCCGCTGCCAAATTTTCCAGACGATCAAAACGTTTTGCGGGTGAAGGTAAACAGGACGtatcaataaaacaagaaGATTGCAAAGATGAATGCGATTCAGACAATGAAACTAAGGACGACGTTAAAtctgaaattgataatgataaagacAGCAAAGAATTAAAGAAACTTCAGTTTTATGGACCTGGACCTAAAATGGCGGGTTTCAATACCAAAGAAggcaaaaaatcaaataaaacacgcggaattaaatatacatatgattaCGACCCGTTGgctaaatatatttgtcataaTTGCGGTAGAGGTGATATGGAAGAGAGTATGCTGCTCTGTGATGGTTGCGATGACAGCTATCATACATTTTGTCTTTTACCACCACTCACAGAAATTCCAAAAGGTGATTGGCGATGTCCCAAATGTGTTGCCGAAGAGGTATCCAAACCTATGGAGGCATTTGGTTTCGAGCAGGCGCAACGAGAATATACACTCCAACAATTTGGTGAAATGGCAGATCAATTTAAAAgtgattatttcaatatgcCTGTACATATGGTGCCAACATCATTGGTGGAGAAAGAATTTTGGCGAATTGTATCGTCAATCGATGAAGATGTCACAGTGGAATACGGCGCTGATCTTCATACAATGGATCATGGATCGGGTTTTCCTACAAAAACAAgtgtcaatttatttacatgcGATCAAGAATATGCTGAATCTTCATGGAACTTAAATAATCTTCCTGTACTCGAAGGGAGTGTCTTGGGCCATATTAATGCTGACATCAGTGGAATGAAAGTGCCATGGATGTACGTTGGTATGTGCTTCGCAACGTTTTGCTGGCATAATGAAGATCATTGGAGTTATTCgatcaattatttacattggGGTGAACCCAAAACTTGGTATGGAGTACCAGGCTCTCAAGCTGAAAAATTTGAGCATTCCATGAAGTCTGCAGCACCAGAACTATTTCACAGTCAACCTGATTTACTTCATCAGCTTGTAACAATCATGAATCCAACTATTTTAAGTAATGaagGTGTATCAGTATTTAGAACAGATCAACATGCGGGTGAATTTGTTGTCACGTTTCCACGAGCTTATCATGCCGGTTTCAATCAAGGGTATAACTTTGCTGAAGCAGTAAACTTTGCACCAGCTGACTGGTTAAAACTTGGTAGAGAATGCATAGCCCATTATTCAAATCTTCGACGCTTTTGTGTCTTTTCACACGACGAATTGGTGTGCAAAATGTCATTAGATCCAGATGCATTGGATATAGGGATAGCCACAGCGACTTATCAAGATATGCTACAAATGGTCGATGATGAGAagaaattgaggaaaaatttaCTGGAATGGGGTGTTACAGAGGCCGAACGTGAGGCATTCGAGTTGCTGCCAGACGATGAACGACAGTGTGAGGCGTGTAAAACAACGTGTTTTCTCAGTGCTGTGACGTGCTCGTGTCACAGTTCACAATTAGTGTGTCTGCGACATTTTACTGATTTGTGTAGTTGTACACCAGAAAAGCATACATTACGTTATCGCTATACGCTTGATGAATTGCCAATAATGttgcaaaaattgaaattaaaagcCGAGTCGTTTGACTCGTGGGTGACAAAAGTGAAGGAGGCTATGGACCCGaaaggtgaaaaaattgaattgacagAACTCAAAGAATTATTGAGCGAAgctgagaataaaaaattccccGACAGCGAATTATTAACGGCATTAACAACAGCTGTACAAGATGCTGAAAAGTGCGCGAGTGTCGcacaacaattattgaataataaacaacgTACACGTACACGACAATCAGTTGatactaaatataaattaacagTCGAAGAATTGACTTTATTCtataaagaaataacaaacttatgttgtgaattgaaagaatCGGATGGTGTTAAGTATATTTTAGACCAAGTTGTACAATTTCAAAAGGACGCAGAAGATTTAGAGACAAAATGTGACGATTGTGATTATgctaaattggaaaaatgtatTGATTTTGGCGATTCAATTTGCATCGAATTACCACAATTGGTGCGTCTGAAAcagaaattgaatcaaatacaATGGTTGGAGGAGGTCAAGTCAATGCTGGATGAATCAAAATCAGTGACACGTGAAGATTTGgctaaattaattgaaaaaggCATGTCGATACCACCACATATTGATATCGAAACAATGTTATCAAAATTACAACAGcttgtgaataatattgataaatgggAAGAGAAAGCTAAAGGATATTTACAATCAAAAAATCGACAAAacataattgtaattgaagaattcattCAAGAGGCTGATGATATTGATGCGTACTTACCAAGTCTTGATAGTCTTCAGGATATTTTAACAAAAGCGAAAAATTGGACAAAAACCGTTGAAGAGATTCAAGCTCGCGATAATTATCCATATTACGATACACTAGACGATCTTGTACGTAAAGGTAGAAATATTCCATTACATCTTGACGCTTTGCCATTATTAGAATCAACATTATCACAAGCTAAAGCATGGAAAGATAGAACAGCAAGAacatttttgagaaaaaattcacattataCGCTGATGGAAGCTCTATCGCCGCGTATTGGTGTCGGTGTTCAAGCAttgaaaacgaagaaaaataaaggtgATGAGAGTATTGGCGCTGTTTTCGTATGTGACACAAAATTGGATGACACGAGTGATTCGGCTCACGTTGTTGCGGCATTCAAACTCGCAGAACAACGTGAGATGGAAGCGATGAGGAATTTACGCGAAAGAAATACATCAAAAGCTAGCTTCGATGATTCAAGATATTGTGTATGTAGACGACCACGTTTTGGATTAATGTTACAATGTGAATTGTGTAAAGATTGGTTTCATTCAAATTGCGTGCCACTTCCAAAGACTATGTACAAAGGCAAAGTTCAATCATCGAGggaaacaaaatttttgtgtcCGTGTTGTTTAAGATCGCGTCGACCACGATTAGAAACAATTCTGGCGCTTTTGGTTAGTctacaaaaaatttccatcagATTACCAGAGGGTGAAGCACTTCAGTGTCTTACTGAACGTGCAATGAATTGGCAAGACCGCGCTAGACAAGCGTTAGCAACAGAAGAAATATCATCGGTATTGGCTAAGTTATCGGTGATGTCACAGAAACTCGTTGAAGCCGCGGCACGTGAAAAAACTGAGAAAATAATTAgcagtgaattgaaaaaagcCGCTAATAATCCAGAATTACATCAACGAGTACAAGCAATTGCACCATTGAGTGGTGTACATTCGGATGACAGTGTTCTCAGTACGGCTGAGGACGATGATGATGTTGTTACAATTGATGGCGACGAGCCAACGTGCAGTACTTTCAACAGCAGCGAACATGCTTATTCATATGTTTCAAAGTTTCAACGAAAATTACAGTCTCAAAATCCCGAGAGTTCAGTTGTACTTTCAGTGACAGCACGAACGAGATTGGAGGAGTTAATGATGGAGGGTGATCTTTTAGAAGTGGCATTAGACGAAACACAACACATTTGGCGAATTCTCAGTCATACGAATAGCCCAACAACTGTACGTAAATATGCGGCATTTGAGGAAGTACAAGCAAACTTCAACACAGATATCAAGGACGCGAAGAAACGTGGACGTAAAAGGAAGTCGGAGGAGTTTGAGCTGTCTACAAAGAATGTTGGACGGCcgaaagttgatgaaaaaactttagtgaagaaaaagggattcaataataaagaaacaaagaaaattgttaCTGCTCCACCTAGTCCATTGAAACGTGGACCAAGAAAAgtGAAGCGCAAGGAAGGCGAAGAAATTCCGAAGAAACGAGGTGGCAAtcgtaaaaaaacaaaacaagacACTTCTGATGAAGAGGACGACTGTGCAGCTGACAATTGTTTAAGACCTAATGGACGTGAAGTCGACTGGGTTCAATGCGATGGTGGATGCAATGGATGGTTCCATATGCATTGTGTAGGACTCGATAGAACCGAACTTGCTGAGGAAGACGACTACATATGCAGTAATTGCAAGGATGCGGATCAAAACGCAACGGGTTATCTCAGTGGCGACAACGAGCCAGACGACATCGAGGAAGAATCATCCTCCGTCACgacatattaa
Protein Sequence
MVSKVDANNIESTRFTRGANTRDIMGEKSTGNCGANGETDFEFGVPPEAPVFEPTAEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIETVTRERRWAKIANKLGYPSGKSVGSILKNHYERILYPFDVFKQGKTLGDIKIEPETEVNEKKDRDYKPHGIISRQQIKPPAAKFSRRSKRFAGEGKQDVSIKQEDCKDECDSDNETKDDVKSEIDNDKDSKELKKLQFYGPGPKMAGFNTKEGKKSNKTRGIKYTYDYDPLAKYICHNCGRGDMEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAEKFEHSMKSAAPELFHSQPDLLHQLVTIMNPTILSNEGVSVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKLGRECIAHYSNLRRFCVFSHDELVCKMSLDPDALDIGIATATYQDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHFTDLCSCTPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPKGEKIELTELKELLSEAENKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEDLETKCDDCDYAKLEKCIDFGDSICIELPQLVRLKQKLNQIQWLEEVKSMLDESKSVTREDLAKLIEKGMSIPPHIDIETMLSKLQQLVNNIDKWEEKAKGYLQSKNRQNIIVIEEFIQEADDIDAYLPSLDSLQDILTKAKNWTKTVEEIQARDNYPYYDTLDDLVRKGRNIPLHLDALPLLESTLSQAKAWKDRTARTFLRKNSHYTLMEALSPRIGVGVQALKTKKNKGDESIGAVFVCDTKLDDTSDSAHVVAAFKLAEQREMEAMRNLRERNTSKASFDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTMYKGKVQSSRETKFLCPCCLRSRRPRLETILALLVSLQKISIRLPEGEALQCLTERAMNWQDRARQALATEEISSVLAKLSVMSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSVLSTAEDDDDVVTIDGDEPTCSTFNSSEHAYSYVSKFQRKLQSQNPESSVVLSVTARTRLEELMMEGDLLEVALDETQHIWRILSHTNSPTTVRKYAAFEEVQANFNTDIKDAKKRGRKRKSEEFELSTKNVGRPKVDEKTLVKKKGFNNKETKKIVTAPPSPLKRGPRKVKRKEGEEIPKKRGGNRKKTKQDTSDEEDDCAADNCLRPNGREVDWVQCDGGCNGWFHMHCVGLDRTELAEEDDYICSNCKDADQNATGYLSGDNEPDDIEEESSSVTTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_00937800;
80% Identity
-