Basic Information

Gene Symbol
KDM5A
Assembly
GCA_034640455.1
Location
CM067952.1:7057900-7067631[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-25 4.8e-22 78.2 0.0 2 89 115 198 114 198 0.94
2 2 3.5 9.3e+03 -2.8 0.1 49 81 819 849 816 853 0.64

Sequence Information

Coding Sequence
ATGGTGTCCAAGGTAGATACTAATAACATGGACAGCACGAGACTCAATCGGAGTGCCAATGTTAGAGACATAATGGGAGATAAATCAACACCGAGTGGATGTAACGAGAGTGATTTTGAATTTGGTATACCACCTGAGGCTCCCGTTTTCGAACCCACACCCGAGGAATTTTTGGATCCACTCGGATATATCGCTAAAATACGTCCGATCGCTGAGAAATCTGGCATATGCAAGATCAAACCACCACCCAATTGGCAACCACCATTTGCAGTTGATGttgataaattcaaattcacaCCGAGGATACAAAGATTGAACGAGCTTGAGGCGAAAACCAGaataaaactcaattttttagatCAAATTGCCAAGTTCTGGGAGCTCCAGGGCTCGTCATTGAAGATACCGTTGGTTGAGCGGAAGGCGCTTGATCTTTACTCATTACATAAAATTGTGACTGATGAAGGTGGCATTGAAACTGTGACGAGGGAGCGAAGATGGGCGAAGATCGCAAACAAGCTAGGATACCCATCAGGCAGAAGTGTCGGTAGCATTCTGAAGAATCACTATGAAAGGATCTTGTACCCCTTCGACGTCTTCAAGCAAGGGAAAACCCTGGGGGACATAAAAATCGAGCCCGAGACAGAGATCCACGAGAAAAAGGATCGTGACTACAAGCCCCACGGCATCATCTCTCGCCAACAAATAAAGCCACCTCCTGCCAAGTTCTCGAGACGATCAAAGCGTTTCAGCGGTCAAGATGACAAGCAGGACGTCTCCATAAAACAGGAGGATTGTAAAGAAGAGTGTGACTCTGATAATGACTGCAAAGACGATCCAGATGCTGACAGTAAAGAGCTTAAGAAGCTCCAGTTCTACGGCGCTGGGCCCAAGATGGCTGGTTTCaccaaagaaaataaaaagtctAACAAAACTCGCGGTGTCAAACAAAATTATGACTTCGATCCTTTGGCAAAGTACATCTGTCACAATTGCGGACGAGGGGACATGGAGGAGAGTATGTTGCTCTGTGATGGTTGTGACGACAGTTATCACACATTTTGCCTCCTTCCACCGTTGACTGAAATTCCAAAGGGCGACTGGAGATGTCCAAAGTGCGTGGCTGAAGAGGTATCTAAACCCATGGAGGCCTTTGGGTTTGAGCAGGCTCAGAGAGAATATACACTCCAGCAATTTGGGGAGATGGCTGATCAGTTTAAGAGCGATTATTTCAATATGCCTGTTCACATGGTACCAACGTCACTCGTGGAAAAGGAATTCTGGAGGATTGTGTCATCTATTGATGAGGACGTTACTGTTGAATACGGAGCCGATCTCCATACGATGGATCATGGCTCGGGATTTCCAACGAAAACGAGTgtcaatttatttacatgtgacCAGGAGTACGCAGAGTCTGCGTGGAACCTCAATAATCTTCCGGTTCTCCAGGGTAGTGTTCTGGGGCACATTAATGCTGATATAAGTGGGATGAAGGTTCCATGGATGTATGTCGGAATGTGCTTCGCTACATTCTGCTGGCACAATGAGGACCACTGGAGTTATTCGATTAATTATCTACACTGGGGAGAACCGAAAACCTGGTATGGGGTACCTGGCTCTGAGGCTGAACGATTTGAGCATTCCATGAAATCAGCTGCACCTGAGTTATTCCACAGTCAACCTGACTTACTTCATCAACTTGTGACTATTATGAATCCAACGATTCTAACTAATGCGGCTGTACCAGTCTTCAGAACCGACCAGCATGCCGGTGAATTTGTGGTGACTTTTCCACGTGCTTATCACGCAGGGTTCAATCAGGGTTACAACTTTGCTGAAGCTGTCAACTTCGCACCTGCTGATTGGTTGAAAGTTGGCAGAGAGTGTATCGCCCATTACTCAAATCTCCGACGTTTCTGTGTGTTCTCCCACGACGAATTGGTCTGTAAAATGTCCTTGGATCCAGATTCCTTAGACATTGGTATAGCAACAGCGACCTATCAAGATATGCTGCAAATGgtggaggatgaaaaaaaattgaggaaaaatctgCTCGAGTGGGGTGTCACTGAGGCCGAAAGAGAAGCATTCGAGTTACTACCAGACGATGAGAGACAGTGTGAGGCATGTAAAACCACATGTTTTCTCAGTGCTGTGACCTGCGCGTGTCACAGTTCTCAGTTGGTATGTCTGAGACATTTCACTGATCTCTGTTCTTGTCCACCGGAAAAGCATACTCTCCGTTATCGCTACACCTTGGACGAACTACCCATAATGCTGCAGAAATTGAAACTGAAAGCCGAGTCATTTGACTCGTGGGTAACCAAAGTCAAAGAAGCGATGGATCCGAaaggtgaaaaaattgaattgagtgAATTAAAGGAACTATTGAGTGAGGCTGAGAGCAAGAAATTTCCAGAAAGTGAATTACTAACTGCACTGACAACTGCTGTGCAAGATGCTGAGAAATGTGCAAGTGTTGCACAACaattgttgaataataaaCAACGCACAAGAACGAGACAGTCAGTGGATACAAAATACAAGTTGACTGTCGAGGAGTTGACGTTGTTCTACAAGGAGATAACAAATTTGTGTTGTGAATTGAAGGAATCTGATGGAGTTAAATATATTCTAGATCAAGTCGTGCAGTTTCAAAAGGATGCCGAGGAGTTGGAATCAAAGTTTGATGATTGTAATGTCGAGAAATTGGAAAAGTGTATTGACTTTGGGGATTCAATCTGCATTGAACTGCCACAGCTGGTGAGACTCAAGCAGAAATTGAGTCAGATACAGTGGCTGGATGAGGTGAAATCCATGTTGGATGAATCAAAATCAGTGACACGTGAAGATCTTGCTAGATTAATCGAAGCAGGTATGACAATTCCCCCCCATTTTAGCATTGAAACGATGTTGTCCAAACTGCAACAACTTGTCATCAATATTGATAAGTGGGAGGAGAAAGCTAAGGGGTATCTTCAGTCCAAGAGTCGTCAAAATATCGTCATGATCGAGGAGTTTATACAGGAGGCTGACGAGATCGACGCGTACTTACCGAGTCTTGACAACTTACAGGATATACTCACTAAAACGAAGAATTGGACGAAAACTGTTGAAGAGATCCAAGCGAGAGAAAATGCCCCATACTACGACACACTGGAGGAATTAGTCAAGAAGGGACGGAACATTCCCCTGCACCTTGATGCCCTGCCAGTTCTGGAATCCACCCTGTCCCAGGCTAAAGTATGGAAAGAGAGAACCGCGAGAACTTTCCTGAGGAAGAATTCTCATTACACTCTGATGGAGGCTCTTTCACCGAGAATTGGTGTTGGAGTTCAAGCACTTAAAACCAAGAAGAACAAGGGCGAGGAGGCCATCGGGGCGGTATTCGTCTGTGACACAAAATTGGATGACTCGAGTGACTCAGCAGATGTTGTTGCTGCTTTCAAACTGGCTGAGCAACGAGAAATGGAGGCAATGCGCAATCTGAGGGAGAGAAATATATCGAAGGCAGCATACGATGACTCCAGGTATTGTGTCTGCAGGCGGCCAAGATTTGGTTTGATGCTTCAGTGCGAACTCTGCAAGGACTGGTTTCACTCTAACTGTGTGCCACTACCAAAAACAATGTACAAAGGAAAAGTGTCATCAGCCAGAGAAACAAAATTCCTGTGTCCGTGCTGTTTGAGATCGCGAAGACCACGATTGGAAACAATTCTTGCACTTTTACTTAgtttacaaaaaatttcaattcgctTGCCTGAGGGAGAAGCCCTACAATGCCTGACAGAGAGGGCTATGAATTGGCAGGATCGAGCCAGACAAGCACTCGTCACTGACGAGATATCATCTGTTTTAGCTAAATTATCGGTTCTCTCCCAAAAACTCGTTGAAGCTGCTGCACGTgagaaaactgaaaaaattatcagcagTGAGTTGAAGAAGGCAGCAAATAATCCAGAGTTGCATCAACGTGTACAGGCTATTGCACCACTCAGTGGTGTCCATTCGGACGATAGTGTTCTCAGTActgctgatgatgatgatgatgttgtTACCATTGATGGAGATGAGCCATCGTGTAGTACGTTCAACAGCAGTGAGCACGCCTACTCTTATGTATCGAAATTCCAACGAAAATTGCAACTACCCCAGAATGCAGAAAATTCGGTGGTTCTTTCGGAGAGTGCCAGATCTAAGTTGGATGAGCTCATGATGGAGGGCGATCTTCTTGAGGTTGCTCTCGATGAAACACAGCATATTTGGCGAATTCTTAGTCACACCAATAGTCCCAGCAGTGTACGTAAGTACGCGGCTTTCGAGGAGGTCCAGGCTAATTTCAATAGTGATTCCAAAGATCCTAAGAAACGGGGAAGGAAGAGGAAGTCAGAGGAATTTGAGTTACTGAAGAAAATGGGAGGGAGACAAAAGCCTGTGGATGAGAAGACCATTGTTAAGAAGAAAGCTTTTAATAATAAGGATACCAAGAAAATGACTACACCCCCCGGAGCTCTCAAAAGAGGTCCGAGAAAGATCAAACGAAAAGAGGGCGAGGAACTACCAAAAAAGAGGGGTGGGAATAGGAAAAAGACCAAACAAGACACCTCTGATGAAGAAGACGATTGTGCAGCTGGGAATTGTCTCCGACCAAGTGgacGCGAAGTCGATTGGGTGCAATGTGACGGTGGATGTGATGGCTGGTTTCACATGCACTGTGTAGGCCTCGATCGCACTGAACTCACCGAGGAGGACGACTACATCTGTAGCAATTGCAAAGATGCCGAGCAGAGTGCAACGGGATATCTGAGTGGAGACAATGAGCCGGATATCCAGGAGGCGTCGTCTTTCGCTAGGACCTACTAG
Protein Sequence
MVSKVDTNNMDSTRLNRSANVRDIMGDKSTPSGCNESDFEFGIPPEAPVFEPTPEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIETVTRERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLGDIKIEPETEIHEKKDRDYKPHGIISRQQIKPPPAKFSRRSKRFSGQDDKQDVSIKQEDCKEECDSDNDCKDDPDADSKELKKLQFYGAGPKMAGFTKENKKSNKTRGVKQNYDFDPLAKYICHNCGRGDMEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESAWNLNNLPVLQGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSEAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPTILTNAAVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKVGRECIAHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYQDMLQMVEDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCACHSSQLVCLRHFTDLCSCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPKGEKIELSELKELLSEAESKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEELESKFDDCNVEKLEKCIDFGDSICIELPQLVRLKQKLSQIQWLDEVKSMLDESKSVTREDLARLIEAGMTIPPHFSIETMLSKLQQLVINIDKWEEKAKGYLQSKSRQNIVMIEEFIQEADEIDAYLPSLDNLQDILTKTKNWTKTVEEIQARENAPYYDTLEELVKKGRNIPLHLDALPVLESTLSQAKVWKERTARTFLRKNSHYTLMEALSPRIGVGVQALKTKKNKGEEAIGAVFVCDTKLDDSSDSADVVAAFKLAEQREMEAMRNLRERNISKAAYDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTMYKGKVSSARETKFLCPCCLRSRRPRLETILALLLSLQKISIRLPEGEALQCLTERAMNWQDRARQALVTDEISSVLAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSVLSTADDDDDVVTIDGDEPSCSTFNSSEHAYSYVSKFQRKLQLPQNAENSVVLSESARSKLDELMMEGDLLEVALDETQHIWRILSHTNSPSSVRKYAAFEEVQANFNSDSKDPKKRGRKRKSEEFELLKKMGGRQKPVDEKTIVKKKAFNNKDTKKMTTPPGALKRGPRKIKRKEGEELPKKRGGNRKKTKQDTSDEEDDCAAGNCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRTELTEEDDYICSNCKDAEQSATGYLSGDNEPDIQEASSFARTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_00728457;
80% Identity
-