Basic Information

Gene Symbol
KDM5A
Assembly
GCA_963971145.1
Location
OZ020173.1:4686450-4706772[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.1e-25 7.5e-22 77.9 0.0 2 89 150 233 149 233 0.94
2 2 5.3 1.3e+04 -2.9 0.1 49 81 888 918 885 922 0.64

Sequence Information

Coding Sequence
ATGGTCTCGAAGCTCGATGTAAATATCGGCACCGAGGCTGCTGCGAGGCTCACGAGCAACCCCACGAACAAATTGAACAACAATCGTTCGTCCAATCAACAACAACAGACGCAGCAGCCGTCGCTGCAGGGACAACAGAGAAGACAATTGCAGAATCAGCATCCGAATCGCGTTAACGCGACGAACGCGAAAGACATGGGGGATAAAAGCGATACGGATTTCGAATTTGGCATTCCACCCGAAGCTCCGGTTTTCGAGCCAACCGCCGAAGAATTTTTGGATCCTTTGGGTTACATCGCCAAGATTCGTCCGATCGCGGAAAAATCGGGAATCTGCAAGATCAAACCGCCACCAAATTGGCAACCACCGTTTGCCGTCGACGTCGACAAATTCAAATTCGTCCCGAGGATACAGAGGTTAAACGAGCTCGAGGCGAAAACCCGGATAAAACTAAATTTTTTAGACCAAATAGCGAAGTTCTGGGAGCTTCAAGGATCGTCGCTCAAGATACCGTTGGTCGAGCGCAAAGCTCTGGATCTTTATTCGTTGCATCGAATCGTCACCGACGAAGgaggGATAGATCATGTGACTCGTGAGCGTAGATGGGCCAAGATCGCCAACAAAATGGGTTATCCATCGGGTCGGAGCGTCGGCAGCATCCTTAAAAATCACtacgaaagaattttgtatcCCTTCGACGTCTTCAAGCAGGGCAAAAGTCTCGGACCGTTGGGAGAAATtAAAATCGAATCGGAATCGGAAcaaacggagaaaaaagatCGCGACTACAAACCCCACGGAATAATTTCCCGTCAACAGATAAAACCTCCCCCGGCAAAATTTTCCCGACGTTCCAAACGTTTCGCGGGTGATGAAAAATCCCAAGACTCGTCAGGATTGTCATCCCTAAAAAACGAAGATTGCAAGGACGATTGCGATTCGGACCCTGATTGCAAACCCGAAGTCGGCCGAATGAGAACAAAAATCGATCCCGACGACAAGGACAACAGCAAAGAACTCAAAAAGTTACAATTCTACGGACCCGGTCCGAAAATGGCGGGTTTCAATACCAAAGAAGGTGGAAACGTCGGTGGAAACATCGGTGGTGGAAACGTCGGTGGTGGAAAAAAAGCTGCGAAAACTCGGGGTGTCAAACTCACTTACGAATTCGATCCTTTGGCCAAATACATATGTCACAATTGCGGTCGTGGTGACATGGAAGAAAGCATGTTACTGTGCGACGGTTGCGACGACAGTTATCACACTTTTTGCTTGTTACCACCTTTGACGGAAATTCCAAAAGGCGATTGGCGATGTCCCAAATGCGTCGCCGAAGAAGTTTCCAAACCCATGGAAGCGTTCGGTTTCGAACAAGCCCAACGCGAATACACCCTTCAACAATTCGGCGAAATGGCTGATCAATTTAAAAGCGATTATTTTAACATGCCCGTTCACATGGTACCAACGTCGTTGgtggaaaaagaattttggcgAATCGTTTCGTCGATCGACGAAGACGTCACCGTAGAATACGGAGCCGATTTGCACACCATGGATCACGGTTCGGGTTTTCCCACGAAAACCAGCGTTAATCTTTTCACTTGTGATCAGGAATACGCCGAATCAGCGtggaatttgaataatttgccGGTTTTGGAAGGAAGCGTTTTGGGACACATCAATGCTGATATCAGTGGCATGAAAGTACCTTGGATGTACGTTGGCATGTGTTTCGCCACTTTTTGCTGGCACAACGAGGATCATTGGAGTTATTCGATCAATTATCTTCATTGGGGCGAACCCAAGACTTGGTACGGCGTGCCCGGGGCGGAAGCGGAAAAATTCGAGCATTCGATGAAATCGGCGGCTCCGGAACTTTTTCACAGTCAACCGGATCTTTTGCATCAATTGGTTACCATTATGAATCCTACTATTCTCACGAATGAAGGAGTTCCGGTGTTCAGAACGGATCAGCACGCCGGTGAATTCGTGGTTACATTTCCCCGCGCTTATCACGCCGGTTTCAACCAAGGTTACAATTTCGCCGAGGCTGTGAACTTCGCGCCGGCCGATTGGCTCAAGGTCGGACGTGATTGCATCTCCCACTATTCGAATCTTCGACGTTTCTGCGTTTTTTCGCACGACGAACTCGTTTGCAAAATGTCTTTGGATCCGGATTCTCTGGACATCGGGATCGCGACCGCGACTTATCAGGACATGTTGCAGATGGTCGACGACGAGAAGAAACTACGAAAGAATCTGCTCGAATGGGGTGTCACCGAAGCCGAGAGAGAAGCTTTCGAGCTGCTGCCCGACGATGAGAGACAATGCGAGGCGTGTAAGACAACGTGTTTTCTGAGCGCGGTGACCTGTTCGTGTCAGAGCTCGCAATTGGTCTGTCTCAGACATTTCACCGATCTTTGCAGCTGTTCGCCCGAGAAGCACACGCTTCGTTACAGATACACCCTAGACGAGCTTCCCATAATGTTGCAAAAATTGAAACTCAAAGCCGAGTCCTTCGACTCTTGGGTGTCCAAGGTCAAAGAGGCCATGGATCCCAAAGGCGAGAAGATCGAACTCACCGAATTGAAGGATCTGCTCAGCGAGGCGGAGAGCAAAAAATTTCCGGACAGCGAACTTCTGACCGCTCTCACTACTGCGGTACAAGACGCCGAAAAGTGCGCCAGCGTGGCGCAACAACTTTTGAACAACAAGCAGCGCACGAGGACTCGACAATCCGTCGACACCAAGTACAAACTAACGGTCGAGGAGTTGACGCTGTTCTACAAAGAGATAACGAATCTGTGCTGCGAATTGAAGGAATCGGACGGTGTCAAATACATTCTGGATCAAGTCGTGCAGTTTCAGAAGGACGCCGAAGATCTGGAAACCAAAACCGGTGACGATTGCGACGTAGCGAAGCTCGAAAAATGCATCGACTTTGGTGATTCGATATGCATAGAATTGCCACAATTGTCGaggttgaaacaaaaattgagtCAGATACAGTGGTTGGACGAGGTTAAATCGATGCAGGAAGATTCGAAATCGATAACTCGCGAGGACGTTGCGAAATTGGCCGAAAAAGGAATGACGATTCCACCGCATTTTACGATCGAAAATATGATTTCGAAGCTTCAACAGTTGATGATAAGCATCGACGCGTGGGAGGACAAAGCGAAGATTCATTTGAACGCGAAAAATCGACAGAACATCGCCGTTATCGAGGAATTCGTGCAGGAAGCCGAAGACATCGACGCTTATTTGCCGAGTCTCGACGGTCTTCAGGATATTCTCACGAAAGCCAAAAATTGGAGCAAAACCGTTGAGGAAATTCAGGCGCGCGACAATTTCACGTATTACGACACGCAAGACGATCTTTTGCGCAAGGGCAGAAACATTCCGTTGCATCTCGATGCTCTGCCGATTCTCGAATCCAATCTATCAcagGCGAAAGCATGGAAGGAAAGAACGGCAAGAACCTTCCTGCGAAAGAATTCGCACTACACGCTCATGGAAGCTCTCTCGCCGCGCATCGGCGTTGGGGTTCAAGCtttgaagacgaagaagaacaaGGGAGACGAAAGCGTGAACTCGGTATTCGTTTGCGACACGAAACTCGAGGATTCGAGCAGTTCGGCCGAAGTCGTGGCGGCTTTCAAACTCGCGGAACAACGTGAGATGGAAgctatgaaaaatttgagggaacgaaatttgtcaaaaGGGGAAAACGCCGATTCGAGATATTGCGTCTGTCGCCGACCGAGGTTCGGTCTGATGCTTCAGTGCGAACTATGCAAGGATTGGTTTCACTCGAATTGCGTGCCGCTTCCGAAAACGATGTACAAAGGCAAAGCGCCGACGAGTCGAGAGACGAAGTTTTTGTGTCCTTGCTGTTTGAGATCGAGAAGGCCGAGGTTGGAAACGATTCTCGCGCTGCTCGTGAGTCTGCAAAAAATTCCAGTGCGATTGCCGGAAGGCGAGGCGCTTCAGTGTTTGACGGAACGGGCGATGAACTGGCAGGATCGTGCGAGACAAGCTCTCGCCGCCGACGAGATAAACACGGTACTGACCAAATTGTCCGTACTTTCGCAAAAACTCGTCGAGGCCGCGGCTCgggaaaaaaccgaaaaaataataaccagcGAACTGAAAAAAGCAGCGAATAATCCGGAACTGCATCAACGGGTTCAGGCGATCGCTCCGCTCAGCGGAGTTCACTCGGACGACAGCGTTCTCAGTACGGCTgatgacgatgacgacgtcgTCACCATCGACGGCGAGGAACCTACCTGCAGCACCTTCAACAACAGCGAACACGCCTACTCCTATGTATCGAAATTCCAACGAAAATCGCAATCTCAAAACCCGGAGACTTCCGCAGTACTGACGGAAGAAGCGAGAACGCGATTGGAGGAGCTCATGATGGAGGGCGATCTTCTCGAGGTGTCGTTGGACGAAACCCAGCACATGTGGAGAATCCTAAGTCACACGAACAGTCCGAGCAGCGTGAGAAAATACGCCGCGTTCGAGGAAGTCCAAGCGAATCTAAACGCCGACATGAAGGACGTGAAGAAGCGCGGGAGAAAACGAAAATCCGAAGAATTCGAGCTTTCGAAGAAGCTCGGAAAGCAAAagatcgacgagaaaaaatctaAGAGCAAGGAGAAAAAACCAGCGGCCGCACCGCCGCCGGTGACACCGCCCGGACCTTTGAAACGCGGTCCTCGAAAGATGAAACGAAAGGAGGGCGAGGAGGTGCCGAAGAAACGGGGTGGGAATAGGAAGAAGACCAAACAAGACACGTCCGACGAGGAAGACGATTGCGCGGCTGTCAACTGTCTGCGTCCGAGCggTCGGGAAGTCGATTGGGTGCAGTGCGACGGTGGATGCGACGGTTGGTTCCACATGCACTGCGTCGGTCTCGACAGAGACGAAATTGCCGAGGAGGACGATTACATATGCAGCAATTGCAAAGATATCGACCAAAACGCCACGTTGCGAGATGCAGATCCGCTCGCAGAATCATTAGGCCTGGATGCACTTCTTTCCCTTTCTCAGTCCCAGGGATACCACAGCGGGGACACAGATCCGGAAATTCAGGAGGTTTCGTCATTCGTCAGAACGTGTTAA
Protein Sequence
MVSKLDVNIGTEAAARLTSNPTNKLNNNRSSNQQQQTQQPSLQGQQRRQLQNQHPNRVNATNAKDMGDKSDTDFEFGIPPEAPVFEPTAEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTDEGGIDHVTRERRWAKIANKMGYPSGRSVGSILKNHYERILYPFDVFKQGKSLGPLGEIKIESESEQTEKKDRDYKPHGIISRQQIKPPPAKFSRRSKRFAGDEKSQDSSGLSSLKNEDCKDDCDSDPDCKPEVGRMRTKIDPDDKDNSKELKKLQFYGPGPKMAGFNTKEGGNVGGNIGGGNVGGGKKAAKTRGVKLTYEFDPLAKYICHNCGRGDMEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESAWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGAEAEKFEHSMKSAAPELFHSQPDLLHQLVTIMNPTILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKVGRDCISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYQDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCQSSQLVCLRHFTDLCSCSPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKGEKIELTELKDLLSEAESKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEDLETKTGDDCDVAKLEKCIDFGDSICIELPQLSRLKQKLSQIQWLDEVKSMQEDSKSITREDVAKLAEKGMTIPPHFTIENMISKLQQLMISIDAWEDKAKIHLNAKNRQNIAVIEEFVQEAEDIDAYLPSLDGLQDILTKAKNWSKTVEEIQARDNFTYYDTQDDLLRKGRNIPLHLDALPILESNLSQAKAWKERTARTFLRKNSHYTLMEALSPRIGVGVQALKTKKNKGDESVNSVFVCDTKLEDSSSSAEVVAAFKLAEQREMEAMKNLRERNLSKGENADSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTMYKGKAPTSRETKFLCPCCLRSRRPRLETILALLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALAADEINTVLTKLSVLSQKLVEAAAREKTEKIITSELKKAANNPELHQRVQAIAPLSGVHSDDSVLSTADDDDDVVTIDGEEPTCSTFNNSEHAYSYVSKFQRKSQSQNPETSAVLTEEARTRLEELMMEGDLLEVSLDETQHMWRILSHTNSPSSVRKYAAFEEVQANLNADMKDVKKRGRKRKSEEFELSKKLGKQKIDEKKSKSKEKKPAAAPPPVTPPGPLKRGPRKMKRKEGEEVPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRDEIAEEDDYICSNCKDIDQNATLRDADPLAESLGLDALLSLSQSQGYHSGDTDPEIQEVSSFVRTC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_01207130;
80% Identity
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