Basic Information

Gene Symbol
KDM5A
Assembly
None
Location
contig:19703354-19715232[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.2e-25 1.7e-21 77.0 0.0 2 89 114 197 113 197 0.94
2 2 3.5 1.5e+04 -2.8 0.1 49 81 825 855 822 860 0.64

Sequence Information

Coding Sequence
ATGGTGTCCAAGGTAAATGATTTTGAAAACTCAAGATACAGCAGGACTGCTGCTTACATGAAGAACATGATGGGCGAGAAAAGTTCTGGCTGCGGGGCTGCCGATTCCGACTTTGAGTTCGGTGCACCTCCTGAAGCCCCTGTCTTCGAGCCAACAGCCGAGGAGTTCCTCGATCCGCTGGGTTACATCGCCAAGATTCGTCCTATTGCTGAAAAAGCCGGGATATGCAAAATAAAACCACCGCCTAATTGGCAACCTCCATTTGCCGTGGACGTCGACAAATTTAAATTTGTACCGAGGATACAGAGGCTAAATGAGCTGGAGGCTAAAACAAGGATAAAACTCAATTTTTTAGATCAAATTGCTAAATTTTGGGAGCTCCAGGGTTCCTCATTAAAAATTCCACTTGTTGAAAAGAAAGCGTTGGATCTTTATTCGTTACACAAAATAGTCAGCGAAGAAGGTGGAATTGAAACGGTGAGACGAGAACGAAGATGGGCGAAAATAGCGAACAAATTAGGATATCCCTCGGGGAAAAGTGTCGGAAGTATTTTAAAAAATCACTATGAGAGAATTTTATATCCCTTTGACGTTTTTAAGCAAGGAAAAACTCTCGGTGATATTAAAATCGAAGCTCCGGAAATAGAAGCAAGTGAGAAGAAAGATCGTGATTACAAGCCACATGGTATTATATCACGTCAACAAATAAAACCACCAGCAGCTAAATTTTCTCGTCGATCCAAACGTTTTACGGGACAAGATGAGAAGCAAGATGTTGCTACAATTAAGCAGGAAGACTGTAAAGAAGAATGCGACTCGGACAATGAATGTAAGGAAGAAATTAAGATGGAAGACGATAAAGACAGTAAGGAACTCAAGAAACTCCAGTTTTACGGAGCTGGACCTAAAATGGCAGGCTACAATACCAAAGAGACTAAAAAATCAAACAAAACACGCGGAATAAAGTATACGTATGATTACGATCCACTTGCCAAGTACATTTGTCATAATTGCGGACGAGGAGACATGGAAGAGAGCATGCTGTTGTGTGATGGTTGTGACGATAGTTATCACACGTTCTGTCTTCTTCCACCACTCACAGAAATTCCCAAAGGCGACTGGAGGTGTCCTAAATGTGTAGCCGAAGAAGTTTCCAAGCCCATGGAAGCCTTCGGGTTTGAACAGGCCCAGCGGGAGTACACTCTCCAACAGTTTGGCGAGATGGCTGATCAGTTTAAAAGTGACTACTTCAACATGCCCGTTCACATGGTACCCACCTCACTTGTCGAAAAGGAATTCTGGAGAATAGTGTCTTCCATTGACGAAGACGTCACTGTCGAGTACGGAGCTGATCTTCACACTATGGATCACGGCTCTGGATTCCCCACAAAAACCAGCGTTAATTTATTCACCTGCGATCAAGAGTACGCCGAGTCTGCGTGGAATTTAAATAATCTTCCAGTTCTCCATGGCAGTGTTTTGGGTCACATTAATGCCGATATAAGTGGTATGAAAGTCCCGTGGATGTATGTCGGTATGTGCTTTGCTACATTCTGCTGGCACAACGAGGACCATTGGAGCTATTCGATCAATTACCTGCATTGGGGAGAGCCAAAGACTTGGTATGGCGTTCCTGGGTCAGAGGCCGAAAAGTTTGAGCACTCCATGAAGTCTGCTGCTCCAGAGCTGTTTCACAGTCAGCCTGACTTACTCCACCAGCTGGTTACTATTATGAACCCGACTATTTTAACCAATGAAGGTGTCCCAGTATTCCGAACGGATCAACATGCCGGTGAATTTGTTGTTACGTTCCCGCGAGCTTATCACGCAGGCTTCAATCAAGGCTATAATTTTGCCGAAGCTGTCAATTTTGCTCCTGCCGATTGGCTGAAAATTGGGCGAGAGTGTATTACTCATTACTCAAATTTACGAAGATTTTGCGTATTTTCACACGATGAGTTAGTTTGCAAAATGTCTTTGGATCCAGACTCCTTGGACATTGGAGTTGCGACCGCTACTTATCAAGATATGTTGACGATGGTCGACGACGAGAAGAAGCTAAGAAAAAATTTGCTTGAATGGGGTGTTACAGAAGCTGAACGTGAGGCATTTGAATTATTACCAGACGATGAACGTCAGTGTGAAGCGTGCAAGACGACATGTTTTCTCAGCGCAGTGACTTGTTCGTGTCAAACTAACCAGCTGGTTTGTCTGAGGCACTTCCGTAATCTTTGCGATTGTTTACCGGAGAAACATACCCTTAGATATCGTTACACGCTTGATGAATTGCCAATAATGCTCCAAAAGTTAAAACTTAAAGCCGAGTCTTTTGACTCGTGGGTGATCAAAGTGAAGGAAGCGATGGACCCCAAGGGGGAGAAGATTGAGTTGAGTGAATTCAAGGATTTACTGAGTGAAGCTGAAAACAAAAAGTTTCCTGACAGTGAGCTGTTGACAGCTTTGACCACCGCTGTTCAGGATGCCGAAAAGTGTGCCAGTGTCGCTCAACAGTTGTTAAACAACAAACAACGGACACGAACTCGACAGACTGTTGATACCAAGTACAAATTAACAATCGAAGAGTTGACACTTTTTTACAAAGAAATAACTAATTTATGCTGTGAATTAAAAGAGTCAGACGGTGTTAAATATATATTGGATCAAGTTCTCCAGTTTCAGAAAGACGCCGAGGAGTTTGAAGCACAGAGTGATGACTGTGATTTAGATAAACTTGAAAAGTGTATTGATTTTGGTGATTCTATTTGCATAGAACTACCACAGCTTGTCAGATTGAAGCAAAAGTTACATCAGATACAGTGGCTGGATGAAGTTAAAACTATGTTGGATGAATCAAAATCTATTACAAGAGAAGAACTCGTTAAATTGATCGATCAAGGTAGAACGATTTCACCCCATATAACCGTTGAAAATATGCTGTCAAAATTGCAACAGCTTGTAGTCAATATTGACAAGTGGGAGGAGAAAGCCAAAGGATATCTACAAGCCAAGAATGGTCAGAATATCAGTGTTATCGAGGAATTCATTCAGGAAGCCGATGAAATCGATGCCTATTTACCTAGTCTTGATAATCTGCAGGATATATTGAACAAAGCCAAAAACTGGACCAAGACTGTCGAAGAAATTCAGGCACGTCGTGAAATTTTTCCGTATTATGATACTCTGGATGAACTTGTACGTAAAGGAAAAAATATTCCTCTGCATTTAGAACAACTTTCAGTCCTTGAGTCAACATTATCACAGGCGAAGGCCTGGAAAGAGCGAACAGCCAGAACATTTTTACGTAAAAACTCGCATTATACTCTGATGGAAGCTCTATCTCCGCGAATTGGTGTCGGTGTTCAGGCAATGAAGACCAAAAAGAACAAGGGAGACGAGAGTGCTGGTGCTCTCTATGTCTGTGACACTAAACTCGATGACTCCAGTGACTCCGCGAACGTTGTTGCTGCTTTTAAGCTCGCAGAACAGCGTGAAATGGACGCAATGAGGAGTTTAAGGGAAAGAAATATGCAGAAAGGAAACACCGACGACTCCAGGTTTTGTGTCTGTCGTAGGTCACGCTTTGGCTTAATGCTTCAGTGTGAGCTGTGTAAAGATTGGTTCCATTCGAATTGTGTCCCTCTTCCAAAGACAATACACAAGGGTAAAGTACAATCCTCACGGGAGATTAAATTTTTATGTCCGTGTTGTTTGAGATCGCGTCGGCCACGTCTAGAATCGATTCTGGCACTGCTGGTGGGTCTACAAAAAATTCCCATTAGACTACCAGAGGGTGAAGCACTCACTTGTCTTACTGAGCGCGCAATGAACTGGCAGGATCGTGCCCGGCGTGCTCTAGCCACTGAAGAAATATCCTCGGTACTCACAAAACTGTCGGCATTGTCACAGAAACTCGTTGAAGCTGCAGCACGTGAGAAAACCGAGAAAATAATAACTAGCGAGCTCAAGAAGGCGGCTAATAATCCAGAATTACATCAACGAGTACAGGCTATTGCGCCACTGAGTGGTGTACATTCTGATGACAGTGTACTCAGCGCTGCTGATGATGACGATGATGTTGTTACTCTTGATGGTGATGAACCTTCATGCAGTACTTTCAACAGTAATGAACATGCATATTCGTTTATATCTAAATTACACCGTAAATTACAATCGCAAGGAGGCGAGAGTCCAGTAACCTTGTCGATAAGCGCCCGAACAAGACTTGAAGACTTAATGATGGAAGGTGATCTACTTGAAGTGGCTCTTGATGAGACTCAAGACATCTGGCGAATTCTCAGCCATACAAATAGCCCCACAACAGTACGCAAGTATGCGACATTCGAAGAAGTCCAGGCAAGTTTCAATTCTGATATGAAAGACGCTAAAAAACGTGGAAGAAAAAGAAAGTCTGACGAGTTTGATATGGGTAAAACAATTAGTCGGCAGAAAATAGTTGACGAAAAGTCTCCAGCTAATACTCCGAACGCTATTATCAAGAAGAAAGGTGCTAATACACCGACTGGAGGAAGTGGAGCTGGAGCTGGAGCTGGAGCTGCAGCTGCAGCTACTGGGTTAAATAACAAAGATAAGAAAATAATGCCACAAAGTCCGCTGAAACGTGGACCTCGTAAGATCAAACGAAAGGAAGGCGAAGATGTGCCCAAAAAAAAAGGAGGAAACAGGAAAAAAACAAAGCAAGATACCTCTGACGAAGAAGACGATTGCGCAGCCGACAGTTGTCTCCGACCAAATGGACGTGAAGTCGACTGGGTACAATGTGATGGTGGATGTAACGGGTGGTTCCATATGCACTGTGTTGGTCTCGACAAAACCGAGCTCGCCGAGGAAGACGACTACATTTGCAGTAATTGCAAAGACGCGGATCAAAACACAACGGTACGAAAAGTCAGATAA
Protein Sequence
MVSKVNDFENSRYSRTAAYMKNMMGEKSSGCGAADSDFEFGAPPEAPVFEPTAEEFLDPLGYIAKIRPIAEKAGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVEKKALDLYSLHKIVSEEGGIETVRRERRWAKIANKLGYPSGKSVGSILKNHYERILYPFDVFKQGKTLGDIKIEAPEIEASEKKDRDYKPHGIISRQQIKPPAAKFSRRSKRFTGQDEKQDVATIKQEDCKEECDSDNECKEEIKMEDDKDSKELKKLQFYGAGPKMAGYNTKETKKSNKTRGIKYTYDYDPLAKYICHNCGRGDMEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESAWNLNNLPVLHGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSEAEKFEHSMKSAAPELFHSQPDLLHQLVTIMNPTILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRECITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGVATATYQDMLTMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCQTNQLVCLRHFRNLCDCLPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVIKVKEAMDPKGEKIELSEFKDLLSEAENKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQTVDTKYKLTIEELTLFYKEITNLCCELKESDGVKYILDQVLQFQKDAEEFEAQSDDCDLDKLEKCIDFGDSICIELPQLVRLKQKLHQIQWLDEVKTMLDESKSITREELVKLIDQGRTISPHITVENMLSKLQQLVVNIDKWEEKAKGYLQAKNGQNISVIEEFIQEADEIDAYLPSLDNLQDILNKAKNWTKTVEEIQARREIFPYYDTLDELVRKGKNIPLHLEQLSVLESTLSQAKAWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKKNKGDESAGALYVCDTKLDDSSDSANVVAAFKLAEQREMDAMRSLRERNMQKGNTDDSRFCVCRRSRFGLMLQCELCKDWFHSNCVPLPKTIHKGKVQSSREIKFLCPCCLRSRRPRLESILALLVGLQKIPIRLPEGEALTCLTERAMNWQDRARRALATEEISSVLTKLSALSQKLVEAAAREKTEKIITSELKKAANNPELHQRVQAIAPLSGVHSDDSVLSAADDDDDVVTLDGDEPSCSTFNSNEHAYSFISKLHRKLQSQGGESPVTLSISARTRLEDLMMEGDLLEVALDETQDIWRILSHTNSPTTVRKYATFEEVQASFNSDMKDAKKRGRKRKSDEFDMGKTISRQKIVDEKSPANTPNAIIKKKGANTPTGGSGAGAGAGAAAAATGLNNKDKKIMPQSPLKRGPRKIKRKEGEDVPKKKGGNRKKTKQDTSDEEDDCAADSCLRPNGREVDWVQCDGGCNGWFHMHCVGLDKTELAEEDDYICSNCKDADQNTTVRKVR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2