Basic Information

Gene Symbol
KDM5A
Assembly
GCA_963921915.1
Location
OY998137.1:2034992-2047088[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1e-25 2.9e-22 79.0 0.0 2 89 142 225 141 225 0.94
2 3 3.8 1.1e+04 -3.0 0.1 49 81 874 904 871 908 0.64
3 3 0.18 5.2e+02 1.3 0.0 23 59 1525 1557 1503 1582 0.63

Sequence Information

Coding Sequence
ATGGTATCGAAGCTCGATGTAAATATCGGCTCCGAGGCTTCGAGCTTTTCAACGACAACAGCTTCGCGAAATCTCAATCGCTCCCAAACAAAAACTTGCAAAGAatcacaacaacaacaacaacaacaacaacaaatggATAATAAACACACGAGTCGTGCTTCTAAAGAGATGGGAGACAGAAGCGAATCTGATTTCGAGTTTGGGATTCCTCCTGAAGCTCCTGTCTTCGAACCAACCGCCGAAGAGTTCCTCGATCCTCTCGGATACATCGCCAAAATACGACCGATCGCGGAAAAATCCGGAATATGCAAGATCAAACCGCCACCCAATTGGCAGCCTCCGTTTGCAGTCGACGTCGACAAATTCAAATTCGTACCGAGGATACAGAGGCTCAACGAACTCGAGGCTAAAACTCgaataaaactaaattttttagACCAAATTGCTAAATTTTGGGAACTGCAAGGATCGTCCCTGAAAATACCTCTCGTCGAGCGGAAGGCTTTGGATCTTTATTCTCTTCACAGAATCGTCACCGAAGAAGGTGGAATCGAAAATGTAACTCGGGAACGAAGGTGGGCCAAGATAGCGAATAAATTGGGGTATCCATCGGGTCGCAGCGTCGGAAGTATTTTGAAGAATCATTACGAGAGAATTTTATATCCATTCGACGTTTTCAAGCAAGGAAAAACTCTGGGACCGTTGAGTGACATCAAATTCGAGGCGGAGAATGAATTTCCGGAGAAGAAGGATCGCGATTACAAGCCCCACGGAATAATTTCACGGCAGCAGATAAAGCCACCGCCAGCCAAGTTTTCTCGACGTTCGAAGCGTTTTGCCGGCGAGGacaagcagcagcagcagcagcagcagcagcagcaagatGCCGGGACGATCAAGCAAGAGGATTGCAAGGACGAGTGCGACTCGGATCCGGATTGCAAGCCAACGTtcaaacgagagaaagaggatcCGGACGACAAAGATAGCAAGGAGcttaaaaagttgcaattctACGGGCCTGGCCCAAAAATGGCAGGTTTCAATACCAAAGAAGGTGGAggaggtggtggtggtggtaaaaaatccaacaaaacgCGAGGAGTCAAGTTGACGTACGATTTCGATCCCTTGGCGAAATACATTTGTCACAATTGTGGACGCGGGGATATGGAAGAAAGCATGCTTTTGTGCGACGGTTGCGACGACAGTTATCACACTTTTTGCCTTTTGCCACCGTTGACCGAGATCCCGAAGGGCGATTGGCGGTGTCCAAAGTGCGTCGCCGAGGAAGTCTCAAAGCCCATGGAAGCTTTTGGCTTTGAACAAGCTCAGCGAGAATACACTCTTCAACAATTTGGCGAAATGGCTGATCAGTTCAAAAGCGATTATTTCAACATGCCTGTCCACATGGTACCGACCTCGCTCGTCGAGAAAGAATTCTGGCGAATCGTTTCGTCGATCGACGAAGACGTCACCGTCGAATACGGCGCCGATCTTCACACCATGGACCACGGCTCGGGATTCCCAACCAAAACCAGCGTCAATCTTTTCACCTGCGATCAAGAATACGCCGAATCGGCCTGGAATCTTAACAATTTACCTGTTCTCGAAGGCAGTGTCTTGGGACACATCAACGCCGATATCAGCGGAATGAAAGTCCCTTGGATGTACGTTGGCATGTGTTTTGCTACTTTCTGTTGGCACAACGAGGACCACTGGAGCTAttccattaattatttgcACTGGGGCGAGCCCAAGACTTGGTACGGTGTTCCGGGCTCTCAGGCCGAAAAATTCGAACACTCGATGAAATCCGCCGCTCCGGAACTCTTTCACAGTCAACCCGATCTGTTGCATCAACTCGTGACGATCATGAACCCGACCATTCTTACCAACGAAGgCGTTCCGGTATTTCGAACGGATCAGCACGCTGGAGAATTCGTCGTTACATTTCCACGCGCATATCACGCCGGTTTTAATCAAGGTTACAACTTTGCCGAAGCCGTTAATTTCGCCCCAGCCGATTGGcTCAAAGTCGGCCGCGACTGCATTTCTCATTATTCGAACTTGCGTCGCTTTTGTGTATTTTCGCACGACGAGTTGGTCTGCAAAATGTCCCTCGATCCGGACTCCCTCGACATCGGGATCGCCGCTGCGACTTACCAAGATATGCTGCAAATGGTCGACGACGAGAAGAAACTTCGAAAGAATTTACTCGAATGGGGAGTGACCGAAGCCGAAAGAGAAGCTTTCGAGTTACTGCCGGACGATGAGAGGCAATGCGAAGCGTGTAAGACAACGTGTTTTCTGAGCGCTGTGACGTGCTCCTGTCACAGTTCGCAATTGGTTTGTCTGCGACATTTTACCGAGCTCTGCACTTGTTCTCCGGAAAAGCACACGCTGCGCTATCGTTACACTCTCGACGAATTGCCCATTATgctgcaaaaattgaagctcAAGGCGGAGTCGTTTGACTCTTGGGTATCCAAGGTCAAAGAGGCCATGGATCCCAAGGGGGAGAAAATCGAGTTGACCGAACTGAAGGATCTACTCAACGAGGCGGAGAGCAAAAAGTTTCCCGACAGCGAACTTCTCACTGCGCTCACGACCGCCGTTCAGGACGCCGAGAAATGCGCCAGCGTCGCTCAACAACTTCTCAACAACAAACAGCGCACAAGgACAAGGCAGTCGGTCGACACGAAATACAAGTTGACGGTCGAGGAGTTAACTCTGTTTTACaaagaaataacaaatttgTGTTGCGAGCTTAAAGAATCCGACGGGGTCAAGTACATACTCGACCAGGTAATACAATTCCAAAAGGACGCGGAGGAATTTGAGACCAAGGCGAGCGAAGATTGCGACCTTGCGAAATTGGAGAAATGCATAGACTTTGGTGACTCGATATGCATAGAGCTGCCCCAATTGGCGagattgaaacaaaaattgagccAAATACAGTGGCTGGAGGAAGTCAGATCGATGCAGGAAGATTCAAAGTCGATAACGCGCGAGGAGGTTGCCAAGTTGTCGGACAAAGGTATGCTCATACCGCCGCATTACAGTATCGAAAAAATGCTCTCGAAGCTGCAAGAGTTGATGACGAGCATCGACGCATGGGAGGAGAAGGCAAAGGTTCATTTGAACTCGAAAAACCGACAAAATATCGTCGCGATCGAAGAGATCGTTCAAGAGGCCGACGACATAGACGCTTATTTGCCCAGTCTCGACAGTCTCCAGGATATTCTGACAAAGGCgaaaaattggacgaaaaatgtagAGGAGATTCAAGCTCGAGAGAATTTCCCTTATTACGACACGCTCGAGGAACTCGTGCGTAAAGGGCGCAACATTCCGCTGCATCTCGATGCCCTACCGATGCTAGAATCCACACTCTCCCAGGCCAAAGTTTGGAAAGACCGAACAGCCAGAACTTTCTTGCGAAAGAATTCTCATTACACTCTCATGGAAGCACTCTCACCTCGCATCGGTGTCGGAGTTCAAGCTCTCAAGACTAAAAAGAACAAAGGCGACGAGAGTGTCGGTGCGGTTTTCGTTTGTGACACGAAACTCGACGACACCAGCGAATCCGCCGATGTCGTTGCTGCTTTCAAATTGGCCGAGCAACGCGAAATGGAGGCCATGAGAAATCTGAGGGAAAGAAATCTCGTCAAAGCCAGCCTCGAACACTCGAGGTATTGCGTCTGTCGGAGACCCAGGTTCGGTCTTATGCTCCAGTGCGAATTGTGCAAGGATTGGTTTCATTCCAACTGCGTGCCACTTCCAAAAACTATGTACAAAGGCAAAGTACAGAACAATCGAGAAACGAAATTCTTGTGTCCCTGTTGTCTGAGATCGAGAAGACCCAGGCTCGAAACGATCCTCGCTCTTCTCGTCAGTCTACAAAAAATTCCGATTCGTTTACCCGAAGGCGAAGCTCTACAGTGTCTGACCGAACGTGCCATGAACTGGCAAGATCGTGCGAGACAAGCGCTTGCCACGGACGAGATAAACACAATTCTGACAAGATTGTCCGTACTCTCGCAAAAACTCTCCGAAGCTGCCGCAcgagaaaaaaccgaaaaaatcatcagcAGCGAACTTAAAAAAGCTGCAAACAACCCGGAACTCCATCGACGAGTCCAGGCCATTGCTCCTCTCAGCGGTGTCCACTCGGACGACAGTGTTCTCAGCACAGCCgacgatgacgacgacgtgGTGACGATCGACGGCGACGAGCCGACCTGCAGCACATTCAACAGCAGCGAACACGCTTATTCTTATGTATcgaaattccaacgaaaatcgCAATCTCAAAACTCGGAGACTTCCGTAGTACTGTCGGAGAAGGCGAGAACGCGGTTAGAGGAGCTCATGATGGAGGGTGACCTGTTGGAGGTTTCTCTGGACGAGACACAGCTCATATGGCGAATCCTCAGTCACACCAACAGTCCGAGCAGCGTGAGGAAGTACGCCGCGTTCGAAGAGGTCCAGTCGAATCTCAATAGCGACATTAAGGACGTGAAAAAACGTGGCAGGAAGAGAAAATCCGACGAGTTTGAAATGATGAAGAAACTCGGTCGTCAGAAGGTCGACGAGAAGAGTCCGTCGAACGTGGTCAAGCGCAGGGGCGGCTTcaacaacaaagagaaaaaagtagtCGCTCCTGCTGCAGCGACGACGgcgacgtcgacgacgacgacgacggcggcggcggcggcggcggcgacgacgacgacgacgacgacgacgacgtcagCGGCGACGACAACGACGGCGTCAACGACGACCCCCGCGACACCCGGCCCGTTGAAACGCGGACCGCGAAAgATGAAACGAAAGGAGGGCGAGGAACTGCCCAAGAAGCGAGgaggaaatagaaaaaaaacgaagcaagaCACCTCGGACGAGGAGGACGATTGTGCGGCGGTCAGTTGTCTTCGACCGAGTGGTCGCGAAGTAGATTGGGTACAGTGCGACGGTGGTTGCGACGGTTGGTTCCACATGCATTGCGTCGGCTTGGACAGAGCGGAAATCGCCGAGGAGGACGATTACATTTGCAGTAATTGCAAAGATCCCGATCAAAATGCGACGTCGCGAGATGCCGATCCTCGAGACGAATCATTAGGCCTGGATGCACTTCTTTCACTTTCTCAGTCCCAGGGATACCACAGCGCCGATACCGAACCGGAAATACTGGAAACAACCTCCTTCGTCAAGAGCTACTAG
Protein Sequence
MVSKLDVNIGSEASSFSTTTASRNLNRSQTKTCKESQQQQQQQQQMDNKHTSRASKEMGDRSESDFEFGIPPEAPVFEPTAEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTEEGGIENVTRERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLGPLSDIKFEAENEFPEKKDRDYKPHGIISRQQIKPPPAKFSRRSKRFAGEDKQQQQQQQQQQDAGTIKQEDCKDECDSDPDCKPTFKREKEDPDDKDSKELKKLQFYGPGPKMAGFNTKEGGGGGGGGKKSNKTRGVKLTYDFDPLAKYICHNCGRGDMEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESAWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAEKFEHSMKSAAPELFHSQPDLLHQLVTIMNPTILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKVGRDCISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIAAATYQDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHFTELCTCSPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKGEKIELTELKDLLNEAESKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVIQFQKDAEEFETKASEDCDLAKLEKCIDFGDSICIELPQLARLKQKLSQIQWLEEVRSMQEDSKSITREEVAKLSDKGMLIPPHYSIEKMLSKLQELMTSIDAWEEKAKVHLNSKNRQNIVAIEEIVQEADDIDAYLPSLDSLQDILTKAKNWTKNVEEIQARENFPYYDTLEELVRKGRNIPLHLDALPMLESTLSQAKVWKDRTARTFLRKNSHYTLMEALSPRIGVGVQALKTKKNKGDESVGAVFVCDTKLDDTSESADVVAAFKLAEQREMEAMRNLRERNLVKASLEHSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTMYKGKVQNNRETKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDEINTILTRLSVLSQKLSEAAAREKTEKIISSELKKAANNPELHRRVQAIAPLSGVHSDDSVLSTADDDDDVVTIDGDEPTCSTFNSSEHAYSYVSKFQRKSQSQNSETSVVLSEKARTRLEELMMEGDLLEVSLDETQLIWRILSHTNSPSSVRKYAAFEEVQSNLNSDIKDVKKRGRKRKSDEFEMMKKLGRQKVDEKSPSNVVKRRGGFNNKEKKVVAPAAATTATSTTTTTAAAAAAATTTTTTTTTSAATTTTASTTTPATPGPLKRGPRKMKRKEGEELPKKRGGNRKKTKQDTSDEEDDCAAVSCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRAEIAEEDDYICSNCKDPDQNATSRDADPRDESLGLDALLSLSQSQGYHSADTEPEILETTSFVKSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_01129122;
80% Identity
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