Basic Information

Gene Symbol
KDM5A
Assembly
GCA_011634795.1
Location
PHTE01000879.1:48812-64151[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.8e-26 3.1e-22 79.2 0.0 2 89 107 190 106 190 0.94
2 3 2.1 8.3e+03 -2.3 0.0 51 65 825 838 783 857 0.54
3 3 2.7 1.1e+04 -2.7 0.0 48 65 1031 1049 1029 1058 0.72

Sequence Information

Coding Sequence
ATGGGATCTAAGTTTGATGGACACACTGCTTTTGAATCTCGTTTTGGGACATATCTACGAAAAGACATGAGCGAAAGGAGTGACTcggattttcaatttacaagtCCACCGGAGGCTCCAGTCTTTGAGCCCACTGCCGAGGAGTTCCTGGATCCATTGGGATACATTGCCAAGATTCGTCCAATTGCTGAAAAATCGGGAATCTGCAAGATTAAACCGCCTCCTaATTGGCAACCCCCTTTTGCTGTTGACGtggacaaatttaaattcgtccCAAGGATACAAAGGCTAAATGAATTAGAGGCAAAAACAAggataaaactaaatttcttaGATCAAATTGCTAAATTTTGGGAACTTCAAGGATCgtcattaaaaattccacTAGTTGAGCGTAAAGCACTTGACTTGTATTCTCTACATAGAATAGTAACTAGTGAAGgcGGAATAGAAAATGTGACTAAAGAAAGAAGATGGGCAAAAATAGCAAATAAACTTGGATATCCTTCTGGTCGAAGTGTTGGAAGtattcttaaaaatcattatgaaagaatattatatcCCTTTGATGTTTTTAAACAAGGGAAAACTTTAAGTGATATTaaaattgaACCGGAAATCGAAGCTAATGAAAGAAAGGATCAGGATTATAAACCACATGGAATTATATCGCGACAACAAATTAAACCACcgaatgcaaaattttcaagacgTTCGAAACGATTTACCGGTCAAGATGATAAACAAGATCCATTATCAATTAAACAAGAAGACTGTAAGGAAGAATGTGATTCTGATAATGAATGTAAAGAAGgcgttaaaagtaaaaatacatCGCCTGATAAAGTAGCGGAAAACAGTAAAGAATTGAAGAAACTTCAATTTTACGGTGCCGGTCCAAAAATGGCTGGATTTAATACCAAAGAAAGCAAAAAGTCTAACAAAACCAGAGGGATTAAACTTACCTACGAATTCGATCCGcTGGCTAAAtacatttgtcataattgtGGACGAGGAGACAATGAAGAGAATATGTTGCTGTGCGACGGATGTGATGATAGTTATCACACCTTTTGTCTTTTACCGCCTCTAACTGAAATTCCAAAAGGTGATTGGCGTTGTCCAAAATGTGTAGCTGAGGAAGTTTCAAAGCCAATGGAGGCATTTGGTTTTGAACAAGCTCAACGGGAATATACACTTCAACAATTTGGAGAAATGGCCGATCAATTTAAAAGTGATTATTTCAATATGCCTGTTCATatgGTACCAACCTCACTTGTTGAGAAAGAATTTTGGCGAATAGTATCGTCAATTGATGAGGATGTTACCGTTGAATATGGCGCTGATCTTCATACAATGGATCATGGTTCAGGATTTCCAACTAAAACAAGTGTCAATCTTTTTACATGCGATCAAGAATATGCTGAATCATCgtggaatttaaataatcttccCGTTTTACAAGGAAGTATATTGGGTCATATTAATGCCGATATCAGTGGAATGAAAGTACCTTGGATGTATGTGGGAATGTGTTTTGCAACATTTTGTTGGCACAATGAAGATCATTGGagttattcaattaattatttacattggGGTGAACCAAAAACATGGTACGGTGTACCGGGCTCATTAGCTGAGAGATTTGAAGAATCAATGAAATCAGCGGCGCCTGAATTATTTCACAGTCAACCTGATTTGTTACATCAATTGGTGACAATTATGAATCCtaatattttgacaaatgaaggAGTGCCAGTATTTCGAACTGATCAACATGCGGGTGAATTCGTAGTCACTTTTCCCAGAGCGTATCACGCTGGTTTTAATCAAGGATATAATTTTGCCGAAGCAGTCAATTTCGCACCAGCCGATTGGTTAAAAGTGGGAAGAGAATGCATTTCACATTATTCGAATTTGAGAAGGTTTTGTGTTTTCTCACATGACGAATTGGTCTGCAAAATGTCTTTAGAACCTGATACATTAGATATTGGCGTTGCTACATCAACTTATCACGATATGTTACAAATGGTAgatgatgagaaaaaattgcGAAAAAATCTTCTTGAATggGGAGTGACAGAGGCAGAACGTGAAGCTTTTGAATTACTTCCCGATGATGAGAGACAGTGTGAAGCATGTAAAACGACCTGTTTTTTAAGTGCTGTTACTTGTTCGTGTCAAAGTTCGCAATTGGTTTGTCTAAGGCATTTCACAGATCTTTGTGAGTGTTTGCCTGAGAAGCATACATTAAGATATAGATATACGCTAGATGAATTACCCATCATGTTGCAAAAGTTGAAGCTTAAAGCCGAGTCTTTTGACTCGTGGGTTGCAAAAGTAAAAGAGGCAATGGATCCTGATGGAGAGAAAATTGAGCTTCATGAATTAAAGGAACTTTTAACGGAAGCCGAAGctaaaaaatttcctgaaagTGAACTTTTGACTGCACTTACAAATGCAATTCAGGATGCCGAAAAATGTGCTAGTGTCGCACAACAATTGTTAAGCACTAAACAACGCACGAGaacaAGACAATCAGTCGACAACAAGTACAAATTAACTGTGGAAGAATTAACATTGTTCTACaaagaaatatcaaatttgaGTTGTGAACTTAAAGAAGCAGAGGGCATTAAGTACATATTAGATCAAGTCACGCAATTTCAAAAAGATGCGGAAGATTTGGAAGCGGCTGAAGATGATTGTGATATTGATAAACTTGAGAATTGTATCGATTTTGGAGAATCAATTTGCATTGATTTACCACAGCTCGTCCGATTGAAACagaaAATGTCGCAGATTCGTTGGTTGGAGGAAGTGAAGACAATACAAGAGGAGCCAAAGACAATTACACGTGAGGATCtaggaaatttaattgaaaaaggaaTGACAATTCCACCACATTTCAGTATTGAAAATACACTTTCTAAATTGCAAGGACTTTTAAACAGTATTGATAAATGGGAGGAGAaggcaaaattatttattcacacCAAGGAAcgacaatcaataaaaatagttgagGAATTTGTTATTGAAGCTGATGAAATTGATGCCTATTTAccaagtttaaatatattacaagaagttttaaataaagcaaaaagttggacaaaaattgttgaagaTATTCAAGGAAAGGATAATATTGCATATTATGATACACTTGATGAACTTGTTCGTAAAGGACGAAACATTCCACTACATTTGGACGCGTTACCAGTTCTTGAATCAATTCTTTCGCAAGCAAGATTATGGAAGGAAAGAACAGCGAGGACATTCCTgagaaaaaattcacattataCATTAATGGAGGCATTATCGCCACGTGTTGGCGTTGGTGTACAATCaatgaaaacaaagaaaaatcgtGGCGATGATACAATAAACGCTATATATGTTTGTGATACAAAACTTGACGATTCGAGTAATTCGGCGGCGGTTGTTGCCGCTTTTAAACTCGCTGAACAACGTGAAATGGAAGCAATGAGAAATTTACGAAAGAAAAATGCAATGAAGGCACAACTTGATGATTCAAAATATTGTGTTTGTCGTAAATCAAGATTTGGCACAATGTTTCATTGTGAATTGTGCAGAGACTGGTTTCATTatcacTGTGTACCACTTCCAAAATTGGCTGTCAAGGGAAAAACATCTGTATCGCcggaaatgaaatttctctGTCCTTGCTGTTTAAGATCACGAAGACCACGTTTGGAGACAATTTTATCGCTTTTGGTTAGTCTTCAAAAAATACCAGTACGTTTACCGGAAGGAGAAGCTTTACAATGTCTTACAGAACGTGCCATGAATTGGcagGATCGAGCAAGACAAGCATTGGCTACAGAGGAGGTTAGTTCGGCTTTGTCGAAACTATCGGTCCTATCACAAAAATTGGTGGAAGCTGCTGCTAGAGAAAAGactgagaaaataataagcagCGAATTGAAAAAGGCCGCGAATAATCCTGAACTTCATCAAAGGGTACAGGCAATTGCACCACTCAGTGGAGTACATTCGGATGATAGTGCTCTCAGCGCACaggaggATGACGACGATGTAATTCCACTCGAAGATGATGAACCTACATGCAGTACATTTAATAGTAATGAACACGCTTATTCCTATGtTTCCAAATTCAATCCAAAAGGTGATGGAGTAAAAGATCCGGAATCATCGATTAATTTATCAGATACGGTTAAATCACATCTTGATGATTTAATGATGGAAGGTGATTTATTGGAAGTTGCATTAGATGAAACGCATCATATATGGCGAATTTTAAGTCATACGGCAAGTCCAAAAAGTGTACGTAAATATGCGGCATTAGATGAAACAAAAGGTAATCAAGATTTAGAAGTAAAGGAGGTGAAAAAACGTGGTCGTAAACGAAAATCAGATGAATTTGATCTTATGAAAATGAATCGTCAACGTTCGGAGGAGAAATTATTGTCGAAACAACAACGTAAGGGATTtaataaggagaaaaaaattacgtctGTCACTGGACAAGTAAAACGTGGACCACGTAAGATGAAACGAAAGGATGGGGAGGAAGTTGCGAAGAAGAGGGCAGGACGTAAGAAAACAAAACAGGATACTTCTGAAGATGAGGAAGATTGTGCTGCGTATAGCTGTTTACGACCCAgtgGACATGAAGTCGATTGGGTTCAATGTGATGGTGGTTGTAATGGTTGGTTCCATATGCATTGTGTTGGTCTTGATCGAACTGAACTTGCTGAAGAAGATGACTATATCTGTGCTAATTGTAAAGACACGGATCAAAACACTACGGGATACCAGAGTGCGGATGCTGACACAGATGCTGACAGTCAAGAGATGACATCTTTCGTCAGAACTTGTTAA
Protein Sequence
MGSKFDGHTAFESRFGTYLRKDMSERSDSDFQFTSPPEAPVFEPTAEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTSEGGIENVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLSDIKIEPEIEANERKDQDYKPHGIISRQQIKPPNAKFSRRSKRFTGQDDKQDPLSIKQEDCKEECDSDNECKEGVKSKNTSPDKVAENSKELKKLQFYGAGPKMAGFNTKESKKSNKTRGIKLTYEFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLQGSILGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSLAERFEESMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKVGRECISHYSNLRRFCVFSHDELVCKMSLEPDTLDIGVATSTYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCQSSQLVCLRHFTDLCECLPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVAKVKEAMDPDGEKIELHELKELLTEAEAKKFPESELLTALTNAIQDAEKCASVAQQLLSTKQRTRTRQSVDNKYKLTVEELTLFYKEISNLSCELKEAEGIKYILDQVTQFQKDAEDLEAAEDDCDIDKLENCIDFGESICIDLPQLVRLKQKMSQIRWLEEVKTIQEEPKTITREDLGNLIEKGMTIPPHFSIENTLSKLQGLLNSIDKWEEKAKLFIHTKERQSIKIVEEFVIEADEIDAYLPSLNILQEVLNKAKSWTKIVEDIQGKDNIAYYDTLDELVRKGRNIPLHLDALPVLESILSQARLWKERTARTFLRKNSHYTLMEALSPRVGVGVQSMKTKKNRGDDTINAIYVCDTKLDDSSNSAAVVAAFKLAEQREMEAMRNLRKKNAMKAQLDDSKYCVCRKSRFGTMFHCELCRDWFHYHCVPLPKLAVKGKTSVSPEMKFLCPCCLRSRRPRLETILSLLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALATEEVSSALSKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSALSAQEDDDDVIPLEDDEPTCSTFNSNEHAYSYVSKFNPKGDGVKDPESSINLSDTVKSHLDDLMMEGDLLEVALDETHHIWRILSHTASPKSVRKYAALDETKGNQDLEVKEVKKRGRKRKSDEFDLMKMNRQRSEEKLLSKQQRKGFNKEKKITSVTGQVKRGPRKMKRKDGEEVAKKRAGRKKTKQDTSEDEEDCAAYSCLRPSGHEVDWVQCDGGCNGWFHMHCVGLDRTELAEEDDYICANCKDTDQNTTGYQSADADTDADSQEMTSFVRTC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_00881785;
80% Identity
-