Basic Information

Gene Symbol
KDM5A
Assembly
GCA_933228735.2
Location
OW121692.1:4524300-4538416[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.1e-25 5.5e-22 78.0 0.0 2 89 142 225 141 225 0.94
2 2 5.3 9.4e+03 -2.9 0.1 49 81 863 893 860 897 0.64

Sequence Information

Coding Sequence
ATGGTCTCGAAGCTCGATGTAAATATCGGCTGCGAGGCTGCGAGGTTCCCTACGACAAATCAACACCAGCACAACGGCAATCGCGGACACggtcaacaacaacaacagcagcacaGCGAGAAGCTCAACAGCCGAGCGAacggcaacagcagcagcaggaacATCAAAGATATGGGAGACAGGAGCGATTCGGATTTCGAGTTCGGGATACCGCCCGAGGCTCCGGTATTCGAGCCAACGGCCGAAGAGTTTCTCGATCCTCTCGGTTACATCGCAAAAATTCGTCCGATAGCCGAGAAATCCGGAATATGCAAGATCAAACCGCCGCccAATTGGCAGCCACCGTTCGCCGTGGACGTCGACAAATTCAAATTCGTACCGAGGATACAGAGGCTAAACGAGCTCGAGGCGAAGACGAGgataaaactcaattttttagaTCAAATCGCAAAATTCTGGGAGCTTCAAGGATCGTCGCTGAAGATACCGTTGGTCGAGCGGAAAGCCTTGGACCTTTACTCGCTTCACAGAATCGTCACCGACGAAGGAGGAATCGATCACGTGACCCGCGAAAGAAGATGGGCCAAGATCGCGAACAAAATGGGATATCCGTCGGGTCGCAGCGTCGGCAGTATTTTGAAGAATCATTACGAGAGAATTCTGTACCCTTTCGATGTATTCAAGCAGGGAAAAACACTCGGGCCTTTGGGTGAAATTAAATTCGAGTCGGAGCCGGAGCAGCCCGAGAAGAGGGACCGGGACTACAAGCCCCACGGTATAATATCTCGTCAGCAGATAAAGCCACCGCCTGCAAAGTTCTCGAGGCGTTCGAAGCGTTTCGCGGGCGAAGATAAGCAGGCGGAAGCGGCGTTGGGCTCGATAAAGCAGGAGGACTGCAAGGACGAGTGCGACTCGGATCCCGAGACGAAAGACGTCCGCAGGGAGATCGACGATCCCGACTCGGACAAGGACAACAGCAAGGAGCTGAAGAAGCTCCAGTTCTACGGACCCGGCCCAAAAATGGCGGGCTTCAATACCAAAGAGGGCGGAAAGAAATCCAACAAGACACGCGGGGTGAAGCTCACGTACGAGTTCGATCCGCTGGCGAAATATATTTGTCACAATTGCGGCAGGGGCGACATGGAGGAGAGCATGCTGCTGTGCGACGGTTGCGACGACAGCTACCACACGTTCTGCCTGTTGCCACCGTTGACGGAGATCCCGAAGGGCGACTGGCGATGTCCGAAGTGCGTCGCCGAGGAGGTTTCGAAGCCGATGGAGGCTTTCGGCTTCGAGCAGGCCCAGAGGGAGTACACGCTTCAGCAGTTCGGCGAGATGGCCGACCAGTTCAAGAGCGACTACTTCAACATGCCCGTTCACATGGTACCGACGACGCTGGTGGAAAAGGAATTTTGGAGGATcgtctcgtcgatcgacgaggaCGTCACCGTCGAGTACGGTGCGGATCTTCACACGATGGACCACGGTTCGGGTTTCCCGACGAAAACGAGCGTCAACCTCTTCACCTGCGATCAGGAGTACGCCGAGTCGGCGTGGAACTTGAACAACCTGCCGGTCCTCGAGAACAGCGTCCTCGGTCACATAAACGCCGACATAAGCGGCATGAAAGTACCGTGGATGTACGTCGGCATGTGCTTCGCAACTTTCTGCTGGCACAACGAGGATCACTGGAGTTACTCGATCAATTATCTTCACTGGGGCGAGCCGAAGACCTGGTACGGCGTTCCGGGCTCTCAGGCCGAGAGATTCGAACACTCGATGAAATCCGCCGCTCCCGAGCTGTTTCACAGTCAGCCCGATCTTCTCCATCAACTCGTCACTATAATGAATCCTACGATTCTTACGAACGAAGGTGTTCCAGTGTTCAGGACGGACCAGCACGCCGGCGAGTTCGTCGTCACATTTCCCCGAGCTTATCACGCCGGTTTTAATCAAGGTTACAACTTCGCCGAAGCTGTGAACTTCGCGCCTGCCGATTGGCTAAAGATCGGACGCGACTGCATCTCGCACTACTCGAATCTACGACGCTTCTGTGTGTTCTCGCACGACGAGCTCGTGTGCAAGATGTCATTGGATCCAGACAGCCTCGATATCGGCATCGCGACCGCGACTTATCAGGACATGCTGCAGATGGTTGACGACGAGAAGAAACTCAGAAAAAATCTGCTCGAGTGGGGCGTCACCGAAGCTGAGAGAGAGGCTTTCGAGCTGCTGCCGGACGATGAGAGACAATGCGAGGCTTGTAAGACAACGTGCTTTCTGAGCGCGGTAACGTGTTCCTGTCACAGTTCGCAGCTAGTCTGCTTGAGGCACTTCACCGATCTCTGCAGCTGCCCGCCCGAGAAGCACACGCTGCGCTATCGCTACACGCTCGACGAATTGCCCATAATGTTGCAAAAGTTGAAACTGAAGGCGGAGTCCTTCGACTCCTGGGTCTCCAAGGTCAAAGAGGCCATGGATCCGAAGGGCGAAAAAATCGAGCTTACCGAACTAAAGGATCTCCTCAGCGAGGCGGAGAGCAAAAAATTTCCCGACAGCGAACTCCTGACTGCGCTCACGACCGCCGTTCAGGATGCCGAGAAATGCGCGAGCGTCGCTCAACAACTCCTGAACAACAAACAACGCACGAGGACCAGACAATCCGTCGACACAAAGTACAAACTCACGGTGGAGGAGTTGACGCTTTTCTACAAGGAGATAACAAATTTGTGCTGCGAGCTCAAAGAGTCTGACGGCGTTAAGTACATCCTTGACCAGGTTGTCCAGTTCCAGAAGGACGCGGAGGATCTCGAGTCGAAGAGCGGTGACGACTGCGACATCGAGAAGCTCGAGAAGTGCATCGACTTCGGGGACTCGATTTGCATCGAGTTGCCGCAATTGGCGCGTCTGAAGCAGAAATTGAGTCAGATACAGTGGCTCGAGGAGGTGAAATCCATGCAGGAGGATTCGAAGTCGATAACCCGCGAGGACATAGCGAAATTGTCGGAGAAGGGATCGACGATTCCGCCGCATTTCAGCATCGAAAATATGCTCTCGAAACTCCAGGCTCTCATGACGAGTATCGACGCGTGGGAGGACAAAGCGAAAGTTTACCTGAACTCGAAGAATCGGCAGAACATCGTCGCGATAGAGGAATTGGTTCAGGAGGCCGACGACATCGACGCGTATCTGCCCAGTCTCGACAGTCTTCAGGATATCCTGACGAAGGCGAAAAATTGGACGAAAACGGTGGAGGAGATTCAGGCGCGTGAGAATTTTCCCTACTACGACACACTAGACGATCTTGTTCGCAAGGGTCGCAACATTCCCCTGCATCTCGACGCTCTGCCGATGCTCGAGTCGACGCTGTCGCAGGCCAAAGTATGGAAGGAAAGAACGGCGAGGACATTTTTGCGAAAGAATTCGCACTACACACTGATGGAGGCGCTTTCGCCGAGAATCGGCGTCGGTGTTCAAGCACTCAAAACCAAGAAGAACAAAGGCGACGAGAGTATCGGGGCGGTGTTCGTCTGCGACACGAAACTCGACGACACCAGCGACTCCGCTGACGTTGTGGCGGCTTTCAAATTGGCCGAACAACGGGAGATGGAAGCCATGAGGAACCTGAGGGAGAGAAATTTAGTTAAAGCCAGTCTTGAAGATTCGAGGTATTGCGTCTGTCGGAGACCGAGGTTCGGGCTGATGCTTCAGTGCGAGCTCTGCAAGGATTGGTTTCACTCGAATTGCGTACCTCTGCCAAAGACGATGTACAAAGGCAAAGTTCCGACGAGCCGAGAAACAAAATTCCTGTGCCCGTGCTGTTTGAGATCGAGGAGACCGCGGCTCGAGACGATTCTCGCGCTTCTCGTCAGTctacaaaaaattccaatacGCCTGCCGGAAGGCGAGGCGCTACAGTGTCTCACCGAACGAGCGATGAACTGGCAGGATCGGGCGAGGCAAGCTCTTGCAACCGACGAGATCAACACCGTTCTCGCGAAGCTCTCCGTACTATCGCAAAAACTCGTCGAGGCGGCGGCCAGAGAGAAgacggaaaaaattataagcaGCGAACTCAAGAAAGCGGCGAATAATCCGGAACTTCATCACCGAGTCCAGGCTATCGCCCCGTTGAGCGGAGTTCACTCGGACGACAGCGTTCTCAGTACAGCTgacgacgacgacgacgtggtTACCATTGACGGCGACGAGCCTACCTGCAGCACCTTCAACAGCAGTGAACACGCTTATTCCTATGTATCAAAATTCCAACGAAAATCGCAATCTCAAAACCCGGAGACTTCCGTAGTACTGTCGGAGAGCGCGAGAACGCGGTTAGAGGAGCTCATGATGGAAGGCGATCTTCTGGAAGTTGCCCTCGACGAGACGCAGCACATCTGGAGAATCCTCAGTCACACGAACAGTCCGAGCAGTGTGAGGAAGTACGCGGCCTTCGAGGAGGTGCAGGCGAACCTCAACTGCGACATGAAGGACGTTAAGAAACGCGGCAGGAAGCGGAAGTCCGAGGAGTTCGAACTGTCGAAGAAGCTCGGCAGGCAAAAGGTCGTCGACGAGAAGAACATCGTCAAACGCAAAGGTTTCATCAACAAGGATAAGAAAATCGTCACAGCGCCgccggcggcggcagcggcggcggcggcgacgacggcgccTGGTCCACTGAAGCGCGGCCCGCGAAAGATGAAACGAAAGGAAGGCGAGGAGTTGCCGAAGAAACGCGGAGGTAACCGAAAGAAAACGAAGCAAGATACTTCCGACGAGGAGGATGATTGCGCAGCAGTCAGTTGTCTCCGACCCAGCGGTCGAGAGGTCGATTGGGTGCAGTGCGACGGTGGCTGCGACGGTTGGTTCCACATGCACTGCGTCGGCTTGGACAGAACGGAAATCGCGGAGGAGGACGACTACATATGCAGCAACTGCAAAGATCCCGACCAAAACGCAACGTTGCGAGCTGCTGATCCGCTCGCGGAATCATTAGGCCTGGATGCACTTCTTTCCCTTTCTCAGTCCCAGGGATACCACAGCGCGGACACCGAGCCGGAAATCCAGGAGGTCACATCCTTCGTCAGGACCTACTAG
Protein Sequence
MVSKLDVNIGCEAARFPTTNQHQHNGNRGHGQQQQQQHSEKLNSRANGNSSSRNIKDMGDRSDSDFEFGIPPEAPVFEPTAEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTDEGGIDHVTRERRWAKIANKMGYPSGRSVGSILKNHYERILYPFDVFKQGKTLGPLGEIKFESEPEQPEKRDRDYKPHGIISRQQIKPPPAKFSRRSKRFAGEDKQAEAALGSIKQEDCKDECDSDPETKDVRREIDDPDSDKDNSKELKKLQFYGPGPKMAGFNTKEGGKKSNKTRGVKLTYEFDPLAKYICHNCGRGDMEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTTLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESAWNLNNLPVLENSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPTILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRDCISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYQDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHFTDLCSCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKGEKIELTELKDLLSEAESKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEDLESKSGDDCDIEKLEKCIDFGDSICIELPQLARLKQKLSQIQWLEEVKSMQEDSKSITREDIAKLSEKGSTIPPHFSIENMLSKLQALMTSIDAWEDKAKVYLNSKNRQNIVAIEELVQEADDIDAYLPSLDSLQDILTKAKNWTKTVEEIQARENFPYYDTLDDLVRKGRNIPLHLDALPMLESTLSQAKVWKERTARTFLRKNSHYTLMEALSPRIGVGVQALKTKKNKGDESIGAVFVCDTKLDDTSDSADVVAAFKLAEQREMEAMRNLRERNLVKASLEDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTMYKGKVPTSRETKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDEINTVLAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHHRVQAIAPLSGVHSDDSVLSTADDDDDVVTIDGDEPTCSTFNSSEHAYSYVSKFQRKSQSQNPETSVVLSESARTRLEELMMEGDLLEVALDETQHIWRILSHTNSPSSVRKYAAFEEVQANLNCDMKDVKKRGRKRKSEEFELSKKLGRQKVVDEKNIVKRKGFINKDKKIVTAPPAAAAAAAATTAPGPLKRGPRKMKRKEGEELPKKRGGNRKKTKQDTSDEEDDCAAVSCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRTEIAEEDDYICSNCKDPDQNATLRAADPLAESLGLDALLSLSQSQGYHSADTEPEIQEVTSFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_01207130;
80% Identity
-