Pate016054.1
Basic Information
- Insect
- Phymatocera aterrima
- Gene Symbol
- Kdm5a
- Assembly
- GCA_963170745.1
- Location
- OY720666.1:942581-955428[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-24 6.7e-21 74.9 0.0 2 89 108 191 107 191 0.94 2 2 3.3 1.1e+04 -2.8 0.1 49 81 816 846 811 850 0.64
Sequence Information
- Coding Sequence
- ATGGTTTCTAAGGTGGATGTAAATATCGGTTCGGAAGCTCGGTTTGCTAGTGCTTATCACGGTAAAGATATGAGCGAAAAAGGTGACAATGATTTCGAGTTCGCGATACCACCAGAAGCACCAGTATTCGAGCCAACAGCCGAAGAGTTCCTTGATCCTCTTGGCTACATCTCCAAGATTCGTCCCATTGCCGAAAAATCAGGGATTTGCAAAATTAAACCACCACCAAACTGGCAGCCGCCGTTTGCAGTTGATGttgacaaattcaaatttgtaccaAGAATCCAGAGACTAAACGAGCTCGAAGCAAAAACCAGAATAAAGCTTAATTTTTTAGACCAAATAGCCAAGTTCTGGGAACTTCAAGGATCTTCGTTAAAAATTCCACTCGTTGAAAGAAAAGCACTAGACTTATATTCTCTGCACAGAATCGTCACTGAGGAAGGTGGGATTGAAATTGTAACAAAAGAACGGAGATGGGCTAAGATAGCGAACAGGATAGGATATCCTTCTGGTCGGAGTGTAGGAAGTATTTTAAAAAATCATTACGAAAGAATTTTATACCCATTTGACATATTCAAACAAGGAAAGACCCCAACAGATATAAAAATAGAACCAGATTCTGAAGTGAATGAGAAGAAGGACAGAGATTATAAACCACATGGCATAATATCAAGGCAGCAGATAAAACCACCGAATGAAAAGTTTTCGAGACGCTCAAAGCGCTTCGCCGGCACTGATGAAAAGCCCGATTTACTCGCGGAGAACAATTCTCCCATTAAACAAGAGGATTGTAAAGACGAATGCGATTCAGATGGAGAAAATGATAAGGATAATAGCAAGGAActtaaaaaattacaattttatggacCCGGACCTAAAATGGCCGGTTTTAATACCAAAGACGTTAAAAAACCGAGCAAAACAAGGGGCGTCAAATTGCACTAcgatttcgacccgCTCGCTAAATACATTTGTCACAATTGCGGAAGAGGAGATACAGAAGAAAGTATGCTTCTCTGTGACGGTTGCGACGACAGTTATCACACTTTTTGCCTTTTGCCACCGTTAACAGAAATACCGAAGGGAGATTGGAGGTGTCCGAAATGTGTAGCTGAAGAAGTATCAAAGCCGATGGAGGCCTTCGGCTTTGAGCAGGCCCAAAGAGAATACACTTTACAACAATTTGGGGAAATGGCCGATCAGTTTAAGAGCGATTACTTCAACATGCCCGTCCATATGGTGCCGACTCCTCTAGTGGAGAAAGAGTTCTGGCGAATCGTTTCCTCGATAGACGAAGATGTGACGGTTGAATACGGCGCAGATCTACACACAATGGATCATGGCTCTGGTTTTCCGACGAAAACGAGCGTGAATTTATTCACATGCGACCAAGAGTATGCGGAATCTTCATGGAATCTAAACAACCTCCCTGTCCTGCAGGGCAGCGTTCTGGGACACATCAACGCAGATATTAGCGGGATGAAAGTACCCTGGATGTACGTTGGCATGTGTTTTGCGACTTTTTGCTGGCACAACGAAGACCACTGGAGTTATTCCATAAATTATCTACACTGGGGAGAACCGAAAACTTGGTACGGAGTACCAGGATCTCAGGCCGAAAGATTTGAACATTCCATGAAATCTGCCGCTCCGGAATTATTCCACAGCCAGCCGGACCTCCTCCATCAACTTGTTACCATTATGAACCCCAATATCCTCATGAATGAAGGAGTTCCCGTCTACAGGACCGATCAACACGCCGGAGAATTTGTCGTAACATTTCCCAGGGCTTATCACGCCGGTTTTAATCAAGGATATAACTTCGCTGAGGCAGTTAATTTCGCACCTGCCGATTGGCTTAAAATGGGCCGTGAATGTGTTTCTCATTATTCTAACTTGAGAAGATTTTGTGTTTTCTCTCACGACGAGCTCGTCTGCAAAATGTCTCTAGATCCAGATTCATTAGATATTGGTATCGCCACAGCAACTTATCACGATATGCTACAGATGGTTGATGACGAGAAAAAATTACGCAAAAATCTACTCGAATGGGGTGTAACTGAAGCTGAAAGAGAAGCGTTCGAGTTACTACCTGACGACGAAAGGCAGTGCGAGGCATGTAAAACGACTTGTTTTTTGAGTGCTGTGACGTGCGCTTGCCACAGTTCGCAGCTAGTTTGCCTGAGGCATTTTACAGACCTGTGCGATTGCCTGCCTGACAAACATACTCTAAGATATCGTTACACGCTCGATGAGTTACCGATAATGTTACAAAAGCTTAAACTTAAGGCCGAGTCCTTTGACTCGTGGGTTACCAAGGTTAAGGAAGCCATGGACCCAAAAGGGGATAAAATAGAGCTTACGGAGCTTAAAGAACTGCTCAGCGAAGctgagggaaaaaaattcccGGAGAGCGAACTTCTCACTGCGCTCACGACTGCCGTCCAAGATGCTGAAAAATGTGCCAGCGTCGCTCAACAGCTTTTAAATAACAAGCAGAGGACCAGGACCAGGCAGTCTGTCGATACAAAGTACAAACTCACAGTCGAGGAATTGACTCTGTTTTATAAAGAGATAACTAATCTTTGTTGCGAATTGAAGGAATCAGACGGAGTTAAGTACATACTAGATCAAGTCGTACAATTTCAAAAAGATGCGGAGGAACTAGAAGCTAAAGAGGAAGTCACCGACgttgaaaaactcgagaaatGCATCGATTTCGGTGATTCTATTTGCATTGAGCTTCCACAGCTTGTTAGACTCAAACAGAGACTCTTGCAAACGCAGTGGCTGGAAGAGGTGAAATCTATACAAGAAGAACCAAAGTCTGCGAGTCACGACGATCTCACAAAGTTAGTAGAAAAGGGAATGACCATCCCGCCGCATATCAGTATAGAAAACACCTTATCAAAGCTAcaaaatataatgataaacaTAGAAAAGTGGGAAGAGAAGGTGAAGAATTATCtccaaaataaaaatcgtcAGACCATCGTAACGATAGAAGAATTTTTGAAGGAGGCCGACAATATCGACGCATATTTACCGAGTCTAGATGATCTCCAAGATATATTAACCAAGGCTAAAAATTGGAGTAAAAATGTCGAGGATATacaagcaaaagaaaatttccCATACTACGATACTCTCGACGATTTAGTACGCAGGGGAAGAAATATCCCTTTGCATTTAGACGCGCTGCCTATTCTAGAGTCAACTTTGTCACAAGCTAAAGTCTGGAAGGAAAGAACAGCGAAAACGTTCTTGAGGAAGAATTCTCACTACACTTTAATGGAAGCTCTCTCACCGAGGATCGGGGTCGGAGTTCAAGCCATGAAAACCAAGAGAAATAAAGGCGAGGAAACCGTTGGCgctgtttttgtttgtgatACTAAATTGGACGATACTAACGACTCGGCAAATGTCGTCGCCGCTTTCAAACTCGCTGAACAAAGGGAAATGGAAGCTATGAGAAATCTGAGAGAGAGGAATTTGACTAAGACTGAAATCGATGATTCGAGATATTGCGTTTGTCGAAGACCTCGGTTCGGACTTATGTTACAATGTGAATTGTGCAAGGATTGGTTTCACTCAAACTGCGTGCCTTTACCAAAAACCACTTATAAAGGAAAACTCCCGATGTCTCGAGACACTAAATTCCTTTGTCCATGTTGTCTGAGGTCCCGCAGACCAAGGCTTGAAACTATTTTAGCACTTTTAGTAAGTTTACAGAAGATTCCTATCCGGTTACCAGAAGGTGAAGCTCTACAGTGTCTCACCGAGAGAGCTATGAACTGGCAGGATCGGGCGCGGCAGGCTTTAGCCACCGACGAGTTATCCACGGCATTAGCGAAGCTCTCAGTTTTATCGCAAAAGCTTGTCGAAGCAGCAGCGAGggaaaaaacggagaaaataaTAAGCAGTGAGTTGAAAAAGGCTGCTAATAATCCAGAACTACATCAGAGAGTTCAAGCCATCGCCCCTCTCAGCGGCGTACATTCCGATGACAGCGCACCGAGCACCGCAGATGACGACGAAGACGTTGTTACCATCGAGGACGACGAGCCCACTTGTAGTACGTTTAATAGTAACGAACACGATTATTCGTACGtatcaaaatttcaaccgaaCAAACTCCAGTCGCAGGATCCAGATGCTGCAGTAGTTTTGTCAGAAACAGCAAGAGAAAGATTAGAAGAATTAATGATGGAAGGAGACCTGCTCGAGGTAGCATTAGACGAGACGCAACATATATGGAAAATACTCAGTCACACGAATATACCTAGCAGTGTACAAAAGTACGCAACATTTGAAGAAGTACAAGCGACTTTTAAGCATGATATGAAAGACGTTAAAAAACGGGGTAGAAAACGCAAGTCCGAAGAATTTGAGCTGCTCAAAAAACTTGGTAGGCAAAaagtggatgaaaaaaatattgtcaaacgCAAAGGCGGCGCCGCCGCAGCCACCGCTGCTGCCGCTGGTGCTGCGGCAGGAATtaataaagataaaaaagtCCTCGTGGCCGTTGGAGGACCGATTAAGCGAGGGCCTAGAAAGATGAAACGTAAGGAGGGTGAAGAGGGTCCTAAAAAACGAGGcggtaatagaaaaaaaactaaacaaGATACTTCTGATGAGGAGGATGATTGCGCAGCTCTTAATTGTCTCCGCCCGAGTGGAAGAGAAGTCGATTGGGTACAATGTGACGGAGGATGCGATGGATGGTTTCACATGCATTGCGTGGGTTTGGATCGAGCAGAGATTGCAGAAGAAGATGATTATATATGCAGTAATTGCAAAGACGGGGAACAGAATATCAcgTTCGCCGGGCCAGATCCCAGCGACGAATCATTAGGGCTGGATGCACTTCTATCACTTTCTCAATCGCAGGGATGCAACGGCGGGGATACCGATCCAGAGATACAAGAAGATTTCTCTTTCGTGAGGACCTACTAA
- Protein Sequence
- MVSKVDVNIGSEARFASAYHGKDMSEKGDNDFEFAIPPEAPVFEPTAEEFLDPLGYISKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTEEGGIEIVTKERRWAKIANRIGYPSGRSVGSILKNHYERILYPFDIFKQGKTPTDIKIEPDSEVNEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFAGTDEKPDLLAENNSPIKQEDCKDECDSDGENDKDNSKELKKLQFYGPGPKMAGFNTKDVKKPSKTRGVKLHYDFDPLAKYICHNCGRGDTEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTPLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLQGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILMNEGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVSHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCACHSSQLVCLRHFTDLCDCLPDKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPKGDKIELTELKELLSEAEGKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEELEAKEEVTDVEKLEKCIDFGDSICIELPQLVRLKQRLLQTQWLEEVKSIQEEPKSASHDDLTKLVEKGMTIPPHISIENTLSKLQNIMINIEKWEEKVKNYLQNKNRQTIVTIEEFLKEADNIDAYLPSLDDLQDILTKAKNWSKNVEDIQAKENFPYYDTLDDLVRRGRNIPLHLDALPILESTLSQAKVWKERTAKTFLRKNSHYTLMEALSPRIGVGVQAMKTKRNKGEETVGAVFVCDTKLDDTNDSANVVAAFKLAEQREMEAMRNLRERNLTKTEIDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTTYKGKLPMSRDTKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDELSTALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSAPSTADDDEDVVTIEDDEPTCSTFNSNEHDYSYVSKFQPNKLQSQDPDAAVVLSETARERLEELMMEGDLLEVALDETQHIWKILSHTNIPSSVQKYATFEEVQATFKHDMKDVKKRGRKRKSEEFELLKKLGRQKVDEKNIVKRKGGAAAATAAAAGAAAGINKDKKVLVAVGGPIKRGPRKMKRKEGEEGPKKRGGNRKKTKQDTSDEEDDCAALNCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRAEIAEEDDYICSNCKDGEQNITFAGPDPSDESLGLDALLSLSQSQGCNGGDTDPEIQEDFSFVRTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01103329;
- 90% Identity
- iTF_01048036; iTF_01048680; iTF_00938448; iTF_01303091; iTF_01412886; iTF_00059962; iTF_00173947; iTF_00174804; iTF_00175547; iTF_01411260; iTF_00939303; iTF_01413938; iTF_01412091; iTF_00719165; iTF_00718312;
- 80% Identity
- -