Basic Information

Gene Symbol
KDM5A
Assembly
GCA_037576405.1
Location
JARBWI010000006.1:11038635-11051435[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.3e-25 3.5e-22 79.0 0.0 2 89 152 235 151 235 0.94
2 3 4.9 1.3e+04 -3.0 0.1 49 81 885 915 882 919 0.64
3 3 9 2.3e+04 -4.0 0.0 39 52 1553 1566 1550 1588 0.55

Sequence Information

Coding Sequence
ATGGTATCGAAGCTCGATGTAAATATCGGCTCAGAGGCTTCAAGCTTTtccacgacgacgacgacgacaaccaCGCGACAACATCTCAATCGCTCCCaaacaaaaacattcaaaGATTCGCATCAACAAccaaaacaacaacaacaacaacaacaacaaatggATACTAAAACAACGAGTCGCACTAATCTTAATAAAGATATGGGAGACAGGAGCGAATCTGATTTCGAGTTCGGAATCCCCCCTGAAGCTCCCGTCTTCGAACCCACAGCCGAAGAGTTCCTCGATCCTCTCGGTTACATCGCTAAAATACGACCGATCGCTGAAAAATCCGGAATATGCAAGATCAAACCGCCACCCAACTGGCAGCCTCCCTTTGCAGTGGACGTTGACAAGTTCAAATTCGTTCCGAGGATACAGAGACTAAACGAGCTCGAGGCTAAAACCCGAataaaactcaattttttagaTCAAATTGCGAAATTTTGGGAACTTCAAGGATCATCCCTTAAAATACCGCTCGTTGAGAGAAAAGCTTTGGATCTCTATTCTCTTCACAGAATCGTTACAGAAGAAGGTGGAATCGAAAATGTGACGCGGGAACGAAGATGGGCCAAGATAGCGAACAAATTGGGATACCCATCGGGTCGTAGCGTCGGGAGTATATTGAAGAATCATTACGAGAGAATTCTATATCCATTCGACGTTTTTAAACAAGGAAAAACGCTTGGACCATTGGGTGATATCaaattCGAGTCCGAGACTGAATTCCCGGAAAAGAAAGATCGGGATTACAAGCCCCACGGGATAATATCTCGTCAGCAGATAAAGCCTCCGCCAGCTAAATTTTCTCGTCGTTCGAAGCGTTTTGCCGGTGAGGATAAGCAACAGGATGCCGGAACGATTAAGCAGGAGGATTGTAAGGAGGAGTGCGACTCGGATACGGATTGCAAACCAACGTtgaagcgagagaaagaggatcCTGATGACAAAGACAGCAAGGAGCTGAGAAAGTTACAGTTTTACGGGCCTGGTCCAAAAATGGCAGGTTTTAATACCAAAGAAGGTGGAGGCGCcggtggaggaggaggaggaggaggaggaggcggTGGTGGTAAAAAAGCGAACAAAACGCGAGGGGTCAAGTTGACGTACGACTTTGATCCATTGGCTAAATACATCTGTCACAATTGCGGACGAGGCGATATGGAAGAAAGCATGCTCTTGTGCGACGGTTGCGACGACAGTTATCACACTTTTTGCCTTTTGCCACCACTGACCGAGATACCGAAGGGCGATTGGCGATGTCCTAAATGCGTTGCGGAGGAAGTCTCAAAGCCGATGGAAGCATTTGGCTTTGAACAAGCCCAGCGGGAATACACGCTTCAACAATTTGGCGAAATGGCCGATCAGTTTAAAAGCGATTATTTCAATATGCCTGTTCACATGGTACCGACCTCCCTCGTTGAGAAAGAATTTTGGCGAATAGTTTCATCGATCGACGAAGACGTAACCGTCGAATACGGTGCCGATCTTCATACGATGGATCATGGCTCTGGTTTTCCAACGAAAACGAGCGTTAATCTATTCACCTGCGATCAAGAATACGCCGAATCTGCGTGGAATTTGAACAATTTACCGGTTCTCGAAGGCAGTGTTCTCGGACACATAAATGCCGATATCAGTGGTATGAAAGTCCCTTGGATGTACGTCGGCATGTGCTTCGCCACATTTTGCTGGCACAACGAGGATCACTGGAGCTATTCCATCAATTATTTACACTGGGGCGAACCCAAAACTTGGTACGGTGTTCCTGGCTCTCAAGCCGAGAAATTCGAACACTCGATGAAATCCGCTGCTCCCGAACTCTTTCACAGTCAACCCGATCTTTTGCATCAACTCGTCACTATTATGAATCCAACCATTCTTACCAACGAAgGTGTTCCGGTATTCCGAACGGATCAGCACGCTGGTGAATTCGTCGTTACATTTCCACGCGCATATCACGCCGGTTTTAATCAAGGTTACAATTTTGCCGAAGCCGTTAATTTCGCTCCTGCTGATTGgCTCAAAGTCGGTCGTGATTGCATCTCTCACTACTCGAATCTCCGTCGCTTTTGTGTATTTTCTCACGACGAGTTGGTCTGCAAAATGTCCCTCGATCCAGACTCTCTCGACATCGGTATAGCCGCGGCAACTTATCAAGATATGCTGCAAATGGTTGATGACGAAAAGAAACTTCGGAAGAATTTACTTGAATGGGGAGTGACCGAAGCAGAGAGAGAAGCTTTTGAGTTGCTGCCGGACGATGAGAGGCAATGCGAGGCGTGTAAGACAACGTGTTTTCTGAGCGCAGTGACGTGCTCCTGTCACAGCTCACAATTGGTCTGTCTGCGTCATTTTACCGAACTGTGCGCTTGTTCGCCGGAGAAGCATACACTGCGCTATCGTTACACTCTCGACGAATTGCCCATTATGCTACAAAAACTTAAACTGAAGGCAGAGTCGTTTGACTCTTGGGTATCCAAAGTCAAGGAGGCCATGGATCCCAAAGGAGAGAAAATCGAATTGACCGAACTTAAAGATTTACTCAACGAGGCGGAGAGCAAAAAATTCCCCGACAGCGAACTCCTGACCGCGCTCACTACCGCCGTTCAGGATGCTGAAAAATGCGCCAGTGTAGCTCAGCAACTTTTAAACAATAAACAACGCACGAGGACAAGGCAATCGGTCGATACCAAGTACAAGTTGACGGTCGAAGAGTTAACTCTGTTCTACAAAGAGATAACAAATTTGTGTTGCGAGCTTAAAGAATCTGACGGAGTGAAATATATACTGGATCAGGTGGTACAATTTCAGAAGGACGCGGAGGAATTTGAGACAAAGACCGGCGAGGATTGTGACCTCGTTAAATTGGAGAAATGCATAGATTTTGGTGACTCGATATGCATCGAATTGCCCCAATTGGCAAGATTGAAGCAAAAGTTGAGTCAGATACAGTGGCTGGAAGAAGTAAGATCGATGCAAGAAGATTCAAAGTCCATAACGCGCGAGGATGTTGCTAAATTGTCAGAAAAAGGTATGCTCATACCGCCGCATTACAGTATAGAAAAAATGCTTTCGAAGCTGCAAGAATTAATGACGAGCATCGATGCCTGGGAGGAAAAGGCGAAAGTTCATTTGAACTCTAAGAACCGACAAAATATCGTTGCGATCGAGGAACTAGTCCAGGAGGCTGATGATATCGACGCTTATTTGCCCAGTCTCGACAGCCTTCAAGATATTCTTACGAAAGCAAAAAATTGGACTAAGAACGTGGAGGAGATTCAAGCGCGAGAGAATTTTCCTTATTACGACACGCTTGAGGAGCTCGTGCGTAAAGGACGCAACATTCCGCTACATCTCGATTCTCTACCGATGCTCGAATCGACTCTTTCCCAGGCTAAAGTTTGGAAGGAACGAACGGCGAGAACATtcttacgaaaaaattctcattataCCCTCATGGAAGCGCTTTCACCTCGTATCGGTGTAGGCGTTCAAGCTCTCAAAACCAAAAAGAATAAGGGTGACGAGAGTATCGGTGCCGTATTTGTTTGCGACACGAAACTCGACGACACGAGCGAATCCGCGGATGTCGTTGCCGCTTTCAAATTGGCTGAACAACGCGAGATGGAAGCTATGAGAAATTTGAGGGAGCGAAATCTCGTAAAAGCTAGTCTCGAACACTCGAGGTATTGCGTCTGTCGAAGACCAAGGTTCGGTCTCATGCTCCAGTGCGAATTGTGCAAGGATTGGTTTCATTCCAATTGCGTACCACTTCCAAAGACCATGTACAAAGGCAAAGTACCGAACAatcgagaaacaaaattcttgtGTCCCTGTTGTCTGAGATCGAGGAGACCTCGGCTCGAGACGATCCTCGCTCTTCTTGTGAGTCtacaaaaaattccaattcgCTTACCCGAAGGCGAAGCTCTGCAGTGTCTGACCGAACGTGCCATGAACTGGCAAGATCGTGCGAGACAAGCCCTCGCGACGGACGAGATAAGCACCGTACTAACCAAACTGTCAGTACTCTCGCAGAAACTCGTGGAAGCTGCTGCACgtgaaaaaactgaaaaaattataagcagcgaattgaaaaaagctgCGAATAATCCGGAACTCCATCGACGAGTTCAGGCCATTGCTCCCCTGAGTGGTGTTCACTCGGATGACAGTGTTCTCAGCACTGCCgacgatgacgacgacgtaGTGACGATCGACGGTGATGAGCCAACTTGCAGCACGTTCAACAGCAGCGAACACGCTTATTCCTATGTATCGAAATTCCAACGAAAGTCGCAATCTCAAAACTCGGAGACTTCCGTAGTACTGTCGGAGAAGGCGAGAACGCGATTAGAGGAGCTCATGATGGAGGGTGATCTGTTGGAGGTTGCTCTGGACGAGACACAGCACATATGGCGAATTCTGAGTCACACCAATAGTCCGAGCAGTGTGAGAAAGTACGCGGCGTTCGAAGAGGTCCAGTCCAATCTCAATAGCGACATAAAGGACGTGAAAAAACGTGGCAGAAAGAGAAAATCTGACGAGTTtgatatgatgaaaaaattgggtCGTCAAAAAGTAGACGACAAGAGCCCATCGAGCGTCGTCGTCAAGCGCAAAGGCGGCttaaataataaagataaaaaagttgtttctacTACCGcgacaacgacaacaacgacgacgacgacgacaacggcgGCGGCAGCGGCAGCGGCAGCGGCGACGACGACAGCAGCAACGACGACTGCGACAACACCTGGCCCGTTGAAACGCGGACCCCGAAAgATGAAGCGAAAGGAGGGCGAAGAACTGCCCAAGAAGCGTGGaggaaataggaaaaaaacgaagcaagATACCTCGGACGAGGAGGACGATTGCGCGGCGGTCAGTTGTCTTCGACCGAGTGGCAGGGAAGTGGATTGGGTACAATGCGACGGTGGTTGCGACGGTTGGTTCCACATGCATTGCGTAGGCTTGGACAGAGCAGAAATAGCTGAGGAGGATGATTATATTTGCAGTAATTGCAAAGATCCCGATCAAAATGCGACGTCGCGAGATGCCGACCCTCGAGACGAATCATTAGGCCTGGATGCACTTCTTTCACTTTCTCAGTCCCAGGGATACCACAGCGCCGATACTGAGCCGGAAATACTGGAAACAGCCTCCTTCGTCAAGACCTACTAG
Protein Sequence
MVSKLDVNIGSEASSFSTTTTTTTTRQHLNRSQTKTFKDSHQQPKQQQQQQQQMDTKTTSRTNLNKDMGDRSESDFEFGIPPEAPVFEPTAEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTEEGGIENVTRERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLGPLGDIKFESETEFPEKKDRDYKPHGIISRQQIKPPPAKFSRRSKRFAGEDKQQDAGTIKQEDCKEECDSDTDCKPTLKREKEDPDDKDSKELRKLQFYGPGPKMAGFNTKEGGGAGGGGGGGGGGGGGKKANKTRGVKLTYDFDPLAKYICHNCGRGDMEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESAWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAEKFEHSMKSAAPELFHSQPDLLHQLVTIMNPTILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKVGRDCISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIAAATYQDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHFTELCACSPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKGEKIELTELKDLLNEAESKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEEFETKTGEDCDLVKLEKCIDFGDSICIELPQLARLKQKLSQIQWLEEVRSMQEDSKSITREDVAKLSEKGMLIPPHYSIEKMLSKLQELMTSIDAWEEKAKVHLNSKNRQNIVAIEELVQEADDIDAYLPSLDSLQDILTKAKNWTKNVEEIQARENFPYYDTLEELVRKGRNIPLHLDSLPMLESTLSQAKVWKERTARTFLRKNSHYTLMEALSPRIGVGVQALKTKKNKGDESIGAVFVCDTKLDDTSESADVVAAFKLAEQREMEAMRNLRERNLVKASLEHSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTMYKGKVPNNRETKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDEISTVLTKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHRRVQAIAPLSGVHSDDSVLSTADDDDDVVTIDGDEPTCSTFNSSEHAYSYVSKFQRKSQSQNSETSVVLSEKARTRLEELMMEGDLLEVALDETQHIWRILSHTNSPSSVRKYAAFEEVQSNLNSDIKDVKKRGRKRKSDEFDMMKKLGRQKVDDKSPSSVVVKRKGGLNNKDKKVVSTTATTTTTTTTTTTAAAAAAAAATTTAATTTATTPGPLKRGPRKMKRKEGEELPKKRGGNRKKTKQDTSDEEDDCAAVSCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRAEIAEEDDYICSNCKDPDQNATSRDADPRDESLGLDALLSLSQSQGYHSADTEPEILETASFVKTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_01129122;
80% Identity
-