Basic Information

Gene Symbol
KDM5A
Assembly
None
Location
scaffold:141974-156127[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1e-25 3.2e-22 79.0 0.0 2 89 158 241 157 241 0.94
2 3 3.8 1.2e+04 -3.0 0.1 49 81 892 922 889 926 0.64
3 3 2.3 7.3e+03 -2.3 0.0 38 60 1558 1579 1538 1597 0.60

Sequence Information

Coding Sequence
ATGGTATCGAAGCTTGATGTAAATATCGGCTCAGAAGCTCCGAGCTTTTCCACGACAACGACAACTACACGACATCTCAATCGTTCTCAAACGAAAACCAAAGATCAACAACAACAACAACAACAACAACAACCACAGCAACAACATCAACAACAACAACAACAACAACAACAACAAATGGATAATAAAGCATCGAGTCGTACCAATCTTAATAAAGATATGGGAGACAGGAGTGAATCTGATTTCGAGTTCGGAATTCCCCCTGAAGCTCCCGTCTTCGAACCCACCGCCGAAGAGTTCCTCGATCCTCTCGGTTATATCGCAAAAATACGACCGATCGCTGAAAAATCCGGAATATGCAAGATCAAACCGCCACCCAACTGGCAGCCCCCGTTCGCAGTGGACGTTGACAAGTTCAAATTCGTTCCGAGGATACAAAGACTGAACGAGCTCGAGGCTAAGACCCGGATAAAACTCAATTTTTTAGACCAAATTGCGAAATTTTGGGAACTTCAGGGATCATCGTTGAAAATACCTCTCGTTGAGAGGAAAGCTTTGGACCTCTATTCTCTCCACAGAATCGTAACCGAAGAAGGTGGAATCGAAAATGTAACGCGGGAACGAAGATGGGCCAAGATAGCGAACAAATTGGGATACCCATCGGGTCGCAGCGTCGGGAGTATATTGAAGAATCATTACGAGAGAATTCTGTATCCATTTGATGTTTTTAAGCAAGGAAAAACACTTGGACCGTTGGACGATATCAAATTCGAGTCCGAGGCTGAGTTTCCGGAAAAGAAAGATCGCGATTACAAGCCCCACGGGATAATATCGCGACAGCAGATAAAGCCACCACCGGCGAAATTTTCACGTCGCTCGAAGCGCTTTGCCGGCGAGGACAAGCAACAGGATGCCGGAACAATTAAACAAGAGGACTGTAAAGAGGAGTGCGACTCGGACACGGATTGCAAGGCGCCCCTCAAGCGAGAAAAAGAGGATCCGGATGACAAAGACAGCAAGGAACTGAAAAAGCTACAATTTTACGGGCCTGGTCCAAAAATGGCAGGTTTCAATACCAAAGAAGGCGGCGGGGGCGGGGGCGGGACCGGCGGCCCGACACCCGGAGGAGGCGGCGGTAAAAAGTCGAACAAAACGCGAGGGGTCAAGTTGACGTACGAGTTTGATCCGTTGGCTAAATACATTTGTCACAATTGTGGACGAGGCGACATGGAGGAAAGCATGCTCTTGTGCGACGGTTGCGACGACAGTTATCACACTTTTTGCCTCTTGCCTCCGTTGACCGAGATACCGAAGGGCGATTGGCGATGTCCTAAATGCGTTGCCGAGGAAGTCTCCAAGCCCATGGAAGCCTTCGGCTTCGAACAAGCACAGCGGGAATATACCCTCCAACAATTTGGCGAAATGGCCGATCAGTTTAAAAGCGATTATTTCAATATGCCCGTTCACATGGTGCCGACCTCTCTCGTCGAGAAAGAATTTTGGCGTATCGTTTCCTCCATCGACGAAGACGTTACCGTCGAATACGGCGCTGACCTTCATACGATGGATCATGGCTCTGGTTTTCCGACCAAAACGAGCGTTAATCTCTTCACCTGCGACCAAGAATACGCCGAATCTGCGTGGAATTTGAACAATTTACCGGTCCTCGAAGGCAGTGTCCTCGGACACATAAATGCCGATATCAGTGGTATGAAAGTCCCTTGGATGTACGTCGGCATGTGTTTCGCCACGTTTTGCTGGCACAACGAGGATCACTGGAGCTATTCCATCAATTATTTACACTGGGGCGAACCCAAAACTTGGTACGGTGTACCAGGCTCCCAGGCCGAGAAATTCGAACACTCCATGAAATCAGCCGCTCCCGAACTCTTTCACAGTCAACCTGATTTGTTGCATCAACTTGTTACTATTATGAATCCAACCATTCTTACGAACGAAGGTGTTCCGGTATTCCGAACCGATCAACACGCCGGTGAATTCGTCGTTACGTTTCCACGCGCATATCACGCCGGTTTCAATCAAGGTTACAATTTCGCCGAAGCCGTTAATTTTGCCCCTGCTGATTGGCTTAAAGTCGGCCGCGATTGTATCTCTCACTACTCGAATCTTCGTCGCTTTTGTGTCTTCTCCCACGACGAGTTGGTCTGCAAAATGTCCCTCGATCCGGACTCTCTTGACATCGGCATAGCCGCTGCAACTTATCAGGATATGCTGCAAATGGTCGACGACGAGAAGAAACTTCGAAAGAATTTACTCGAATGGGGAGTGACGGAAGCGGAGAGAGAAGCTTTTGAGTTGCTGCCAGACGATGAGAGACAATGCGAGGTGTGTAAGACAACGTGTTTTCTGAGCGCCGTGACGTGCTCCTGTCACAGCTCGCAACTGGTCTGTTTGCGTCATTTCACCGAGCTGTGCGCTTGCTCGCCGGAAAAGCATACCCTGCGCTATCGTTACACTCTTGATGAATTGCCCATTATGCTTCAAAAACTGAAACTGAAAGCAGAGTCCTTTGACTCTTGGGTATCCAAAGTCAAGGAGGCCATGGATCCAAAAGGAGAAAAAATTGAATTGACCGAACTGAAAGATCTACTCAACGAGGCAGAGAGCAAAAAGTTTCCAGACAGCGAACTCTTGACTGCGCTCACAACCGCTGTTCAGGATGCTGAAAAATGTGCCAGTGTTGCTCAGCAACTTCTAAACAACAAACAACGCACGAGGACACGACAATCGGTCGATACTAAGTACAAGTTGACGGTCGAAGAGCTAACTCTATTCTATAAAGAGATAACAAATTTGTGTTGCGAGCTTAAAGAATCCGACGGAGTCAAATATATCCTGGATCAGGTGGTACAATTCCAGAAAGACGCAGAAGAATTTGAGACAAAGACAGGTGAAGATTATGACCTTGTTAAATTGGAGAAATGCATAGATTTTGGTGACTCGATATGCATCGAATTGCCCCAATTGGCGAGATTGAAGCAAAAGCTGAGTCAGATACAGTGGCTGGAAGAAGTCAGATCAATGCAAGAAGATTCTAAATCTATCACGCGCGAGGACGTTGCTAAATTGTCAGAAAAAGGTATGCTCATACCACCGCATTACAGTATCGAAAAAATGCTTTCGAAGCTGCAAGAATTAATGGCGAGCATCGATGCATGGGAGGAAAAGGCAAAGGTTCATTTGAGCTCAAAGAACCGACAAAATATCGTTGCAATCGAGGAACTGGTTCAGGAGGCCGATGATATCGACGCTTATTTGCCTAGTCTCGACAGCCTTCAGGATATTCTTACGAAAGCAAAGAATTGGACAAAAAATGTGGAGGAAATTCAAGCTCGGGAGAATTTTCCTTACTACGACACGCTTGAGGAGCTTGTACGTAAAGGGCGCAACATTCCGCTACATCTCGATGCTCTACCGATGCTCGAATCAACCCTCTCCCAGGCTAAAGTTTGGAAAGAACGAACGGCGAGAACATTTTTACGAAAAAATTCTCATTACACCCTCATGGAAGCGCTTTCACCTCGAATCGGTGTGGGCGTTCAAGCACTTAAAACTAAAAAGAATAAGGGTGACGAGAGTATCGGTGCCGTATTCGTTTGTGACACGAAACTAGACGACACGAGCGAATCTGCAGACGTCGTTGCTGCTTTCAAATTAGCCGAACAACGCGAGATGGAAGCTATGAGAAACTTGAGGGAAAGAAATCTCGTCAAAGCTAGCCTCGAACACTCGAGGTATTGCGTCTGTCGGAGACCCAGGTTCGGTCTTATGCTTCAGTGCGAATTGTGCAAGGATTGGTTTCATTCCAATTGCGTACCACTTCCAAAGACCATGTACAAAGGCAAAGTACCGAACAATCGAGAAACAAAATTCTTGTGTCCGTGTTGTCTGAGATCGAGGAGACCCCGGCTCGAGACGATCCTCGCTCTTCTTGTTAGTCTACAAAAAATTCCAATTCGCTTACCCGAAGGCGAAGCTCTACAGTGTCTGACTGAACGTGCTATGAACTGGCAAGATCGTGCGAGACAAGCCCTTGCAACGGATGAGATAAGCACCGTACTAAGTAAACTATCGGTACTCTCGCAAAAACTCGTAGAAGCTGCTGCACGTGAAAAAACTGAAAAAATTATCAGCAGCGAATTGAAAAAAGCTGCAAATAATCCGGAACTTCACCGGCGAGTTCAAGCCATTGCTCCCTTGAGCGGTGTCCACTCGGACGACAGTGTCCTCAGCACTGCTGACGATGACGACGATGTCGTGACGATCGACGGAGACGAGCCAACTTGCAGTACGTTTAACAGTAGCGAACACGCTTATTCCTATGTATCGAAATTCCAACGAAAATCGCAAACTCAAAACTCGGAGACTTCCGTAGTATTGTCGGAGAAGGCGAGAACGCGATTAGAGGAGCTGATGATGGAGGGTGATCTTTTGGAGGTCGCTCTTGACGAGACACAGCACATATGGCGAATTCTCAGTCACACGAATAGTCCGAGCAGCGTGAGAAAGTATGCGGCATTTGAAGAGGTTCAGTCCAATCTCAGTAGTGACATTAAGGACGTGAAAAAACGCGGTAGAAAGAGAAAATCCGACGAGTTTGAAATGATGAAAAAACTGGGTCGTCAAAAAGTAGAAGACAAAAGCCCATCGAACGTCGTTAAGCGCAAAGGTGGCTTGAATAATAAAGAGAAAAAAGTTGTTTCTACTGCTGCGACAACGACAACGACAACGACGACGACATCAGCAGCGTCAGCGGCAGCGGCTACAACGACGGCAGCAACGACGACTCCAACACCGCCTGGCCCGTTGAAACGAGGACCTCGAAAGATGAAACGAAAGGAGGGCGAAGAATTGCCCAAGAAGCGTGGAGGAAATAGGAAAAAAACGAAGCAAGATACTTCAGACGAGGAGGATGATTGTGCGGCGGTCAGTTGTCTTCGGCCAAGTGGCAGGGAAGTAGATTGGGTTCAGTGCGACGGTGGTTGCGACGGTTGGTTCCACATGCATTGCGTGGGGTTGGACAGAGCAGAAATCGCCGAGGAGGACGATTATATTTGCAGTAATTGCAAAGATCCTGATCAAAATGCGACGTCGCGAGATGCCGATCCCCGAGACGAATCATTAGGCCTGGATGCACTTCTTTCACTTTCTCAGTCCCAGGGATACCACAGCGCCGACACTGAACCGGAAATACTGGAAACAACCTCCTTCGTCAAGATCTACTAG
Protein Sequence
MVSKLDVNIGSEAPSFSTTTTTTRHLNRSQTKTKDQQQQQQQQQPQQQHQQQQQQQQQQMDNKASSRTNLNKDMGDRSESDFEFGIPPEAPVFEPTAEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTEEGGIENVTRERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLGPLDDIKFESEAEFPEKKDRDYKPHGIISRQQIKPPPAKFSRRSKRFAGEDKQQDAGTIKQEDCKEECDSDTDCKAPLKREKEDPDDKDSKELKKLQFYGPGPKMAGFNTKEGGGGGGGTGGPTPGGGGGKKSNKTRGVKLTYEFDPLAKYICHNCGRGDMEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESAWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAEKFEHSMKSAAPELFHSQPDLLHQLVTIMNPTILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKVGRDCISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIAAATYQDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEVCKTTCFLSAVTCSCHSSQLVCLRHFTELCACSPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKGEKIELTELKDLLNEAESKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEEFETKTGEDYDLVKLEKCIDFGDSICIELPQLARLKQKLSQIQWLEEVRSMQEDSKSITREDVAKLSEKGMLIPPHYSIEKMLSKLQELMASIDAWEEKAKVHLSSKNRQNIVAIEELVQEADDIDAYLPSLDSLQDILTKAKNWTKNVEEIQARENFPYYDTLEELVRKGRNIPLHLDALPMLESTLSQAKVWKERTARTFLRKNSHYTLMEALSPRIGVGVQALKTKKNKGDESIGAVFVCDTKLDDTSESADVVAAFKLAEQREMEAMRNLRERNLVKASLEHSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTMYKGKVPNNRETKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDEISTVLSKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHRRVQAIAPLSGVHSDDSVLSTADDDDDVVTIDGDEPTCSTFNSSEHAYSYVSKFQRKSQTQNSETSVVLSEKARTRLEELMMEGDLLEVALDETQHIWRILSHTNSPSSVRKYAAFEEVQSNLSSDIKDVKKRGRKRKSDEFEMMKKLGRQKVEDKSPSNVVKRKGGLNNKEKKVVSTAATTTTTTTTTSAASAAAATTTAATTTPTPPGPLKRGPRKMKRKEGEELPKKRGGNRKKTKQDTSDEEDDCAAVSCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRAEIAEEDDYICSNCKDPDQNATSRDADPRDESLGLDALLSLSQSQGYHSADTEPEILETTSFVKIY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_01129122;
80% Identity
-