Basic Information

Gene Symbol
KDM5A
Assembly
GCA_003227715.1
Location
NW:604549-621598[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.6e-25 2.7e-22 78.4 0.0 2 89 122 205 121 205 0.94
2 2 3.8 6.6e+03 -3.0 0.1 49 81 839 869 836 873 0.63

Sequence Information

Coding Sequence
ATGCTTGCCACGGGCGTTTGTAGTGACTCCTCTGCGCGGTCATCCCGGGACGGACAGTGGCAAAGCGAGAATCGTGGCGGCGGAAGTTCTCGTACGTCCCAAGACATGGCCTGCGACAACCGCGCCGAGAGCGACTTTGAGTTCTTGGTGCCGCCAGAGGCGCCGGTATTCGAGCCCACCAACGAGGAGTTCCAGGACCCGCTCGCCTACATCGCGAAGATACGTCCGATCGCGGAGAAGTCCGGCATCTGCAAGATCAAACCGCCGCCTAATTGGCAGCCGCCGTTCGCCGTGGACGTGGACAAGTTCAAGTTCGTCCCGAGGATACAGAGGCTAAACGAGTTGGAAGCCAAGACCAGGATAAAGTTGAACTTTCTGGATCAGATCGCAAAGTTCTGGGAGCTGCAGGGTTCTTCCCTGAAGATCCCTCTGGTGGAGCGCAAAGCGTTGGACTTGTACTCCTTACACAAGATCGTCACTGACGAGGGTGGGGTGGACACGGTGACGAAGGAGAGGAGGTGGGCGAAGATAGCCAACAAATTGGGCTACCCATCCGGACGAAGCGTTGGTAGCATATTGAAGAATCACTACGAGAGAATTTTATATCCTTTTGACGTTTTCAAGCTGGGAAAGACACTGTCAGATATCAAAATAGAACCAGAAACAGACGCGAACGAGAAGAGGGATCGTGATTACAAGCCGCACGGCATAATATCTCGGCAGCAAATCAAACCACCGAACGAAAAGTTCTCGCGACGATCCAAGCGGTTTACCGGCCAAGAGGAGAAGCAAGATGTATCGATCAAGCAGGAAGACTGCAAGGAAGAATGCGACTCTGATACCGAATGCAAGGATGTCGTTAAGAGCAGGTACTACAGCCCCGAAGGGCCGGACAAAATAGACAAGAGCAAGGAACTTAAGAAATTGCAATTTTACGGACCGGGCCCGAAGATGGCTGGCTTTAATACCAAAGAGGCGAAGAAAGCCAACAAGACACGCGGCTTGAAGTTCGTTTACGAGTTCGATCCTCTGGCGAAATATATCTGTCACAACTGTGGGAGGGGTGATAACGAAGAGAACATGCTGTTGTGCGACGGTTGCGACGACAGCTACCATACTTTCTGCCTTATGCCGCCGTTGACCGAGATACCGAAGGGTGACTGGCGGTGTCCAAAGTGCGTCGCCGAGGAGGTCTCCAAGCCGATGGAGGCGTTCGGCTTCGAGCAAGCGCAGAGGGAATACACGCTGCAACAATTCGGAGAGATGGCTGATCAGTTCAAGAGCGACTATTTCAATATGCCCGTGCACATGGTTCCGACGTCGCTGGTGGAGAAGGAATTTTGGCGGATAGTCTCGTCCATCGACGAGGACGTGACGGTGGAATACGGCGCCGACTTACATACCATGGACCACGGCTCCGGCTTCCCGACCAAGACGAGCGTGAATCTGTTCACGTGCGACCAGGAGTACGCCGAGTCCTCGTGGAATCTGAACAACCTGCCGGTGCTGCGCGGCAGCGTATTGGGTCACATCAACGCCGACATCAGCGGCATGAAGGTGCCGTGGATGTACGTCGGCATGTGCTTCGCCACGTTCTGCTGGCACAACGAGGACCACTGGAGCTACTCCATCAACTACCTGCATTGGGGCGAACCAAAGACGTGGTACGGCGTGCCGGGGTCACAGGCCGAACGTTTCGAACACTCGATGAAGTCCGCGGCGCCTGAATTGTTTCACAGTCAGCCGGATTTGTTGCATCAACTTGTCACCATCATGAATCCGAACATATTGACTAACGAAGGTGTACCAGTATTCAGAACTGATCAGCATGCGGGTGAATTTGTGGTGACATTTCCGAGAGCCTATCACGCCGGGTTCAATCAAGGCTACAACTTTGCAGAAGCCGTGAATTTTGCACCTGCCGATTGGCTCAAGATCGGACGAGACTGCATCACGCATTATTCGAATTTGAGGAGATTCTGCGTGTTCTCTCACGACGAGTTGGTCTGTAAAATGTCTTTGGATCCAGATTCGTTGGACATCGGAGTAGCGACTGCGACATATCACGACATGCTGCAAATGGTAGATGACGAGAAAAAGTTGCGAAAGAATTTACTGGAGTGGGGTGTGACAGAGGCGGAGCGTGAGGCGTTCGAGTTGCTGCCGGACGATGAGAGGCAGTGCGAAGCCTGTAAGACTACCTGCTTCCTAAGTGCCGTTACGTGCTCGTGCCACAGCTCGCAGCTGGTTTGTTTGAGACACTCCGCCGAGCTGTGCAGCTGCCCGCCGGAGAAGCATACGTTGCGTTATCGGTACACGTTGGACGAGCTGCCGATCATGTTGCAGAAGTTGAAACTCAAGGCCGAGTCGTTTGACTCGTGGGTGACTAAGGTGAAGGAAGCGATGGACCCCCGGAATGACAAGATCGTGCTGGCTGAACTGAAGGAGCTGTTGAATGAGGCCGAGAACAAGAAGTTTCCCGAGAGCGAGTTGCTCACCGCTCTTACCACAGCGGTGCAAGATGCTGAAAAGTGCTCGAGCGTCGCGCAACAGCTCCTGAACAACAAGCAACGTACAAGAACCAGGCAGTCAGTCGATACCAAGTATAAACTCACTGTGGAGGAACTGACGCTGTTTTACAAGGAGATTACTAACTTGTGCTGCGAACTCAAGGAATCGGATGGCGTCAAGTACATACTCGATCAGGTGTCGCAGTTTCAAAAGGATGCGGAGGAGTTGGAGTCCAAGGGAGACGACTGTGACATTGACAAGTTGGAGAAGTGTATCGAGTTTGGTGATTCTATCTGCATCGAACTGCCTCAGCTTCAACGGTTGAAGCAAAAATTGATGCAGGTGCAGTGGCTGGAGGAGGTAAAGTCCGTCCAAGACGATCCACGGAACGTCAGCCGCGAGGACGTGATAAAGCTCATTGAGAAAGGCATGGCGATACCGCCGCATTTCAGTGTAGAGAACACGCTCTCGGTGCTGCACTCGCTTACGAAGGCAATCGACAAGTGGGAGGACAAGGTCAAGGTGTTCCTGCAGACGAAGAACAGACGCACCATCTCGGCGGTGGAGGAGTTTGTTCGCGAAGCGGACGAGGTCGAGGCATACTTGCCGAGCTTGGACACGCTGCAGGACATGCTGAACAAGGCGAAGAACTGGACGAAGCTGGTGAACGAGAtacaagcgagagagaacttCCCATATTACGACACATTGGACGATCTGATCAAGAAGGGCAGAAACATCCCGTTACACTTGGACTCCTTGCCGATGCTGGAGTCCACTTTGTCGCAGGCGAAAACATGGAAGGAGAGGACCGCGAGGACATTTCTGAGGAAGAACTCGCACTGCACGCTGATGGAGGTACTGTCGCCTCGCATCGGTGTCGGTGTGCAGGCGATGAAGTCCAAGAAGAACAACAAAGGCGACGAGTCCGTGGGTGCCGTTTACGTTTGCGACACGAAGCTCGACGACTCCAGCAACTCCGCGAACGTGGTGGCCGCCTTCAAATTGGCGGAGCAGCGCGAGATGGAGGCGATGAGGCAACTGCGGGAGAAGAACCTCCTCAAGGTCGAAGTCGAGGATTCCAAGTACTGCTTCTGCCGGCGACCGAGATTCGGCATTATGCTCCAGTGTGAGCTCTGCAAGGATTGGTTCCACTccACCTGCGTGCCTTTGCCCAAAACTTCCTACAAAGGTAAGTCGTCACCGTCGAGGGACATGCGGTTCTTGTGCCCGTGCTGCTTACGTTCCCGACGACCTCGGTTGGAAACGATACTGGCCCTTCTAGTGAGCCTGCAGAAGATCTCGATCCGTTTGCCGGAGGGCGAAGCGTTGCAGTGTCTGACGGAACGCGCAATGAACTGGCAGGACCGTGCGAGGCAAGCATTGGCTACCGAGGAGATCTCCTCTGTAGTGGCGAAACTGTCGGTGATGTCGCAAAAGCTGGTGGAAGCTGCGGCGCGGGAGAAGACGGAGAAGATCATCAGCAGCGAGCTGAAGAAGGCTGCGAACAATCCCGAGCTGCACAAAAGAGTGCAAGCTATCGCGCCGCTCAGCGGTGTGCATTCAGACGACAGCGCGTTCAGTAATACCgaggacgacgacgatgtcatTCCCATTGAAGACGAACCGACGTGTAGTACCTTCAACAGTAACGAGCATGCTTATTCGTACATCTCGAAAATTCGACGGAAAACTCAATCGGGAGAAGGCGGCGATCCGGCGTTCGGCGTACTGTCTGCGAGCGCGAGGTCGCGCTTGGAGGAATTGATGATGGAAGGCGATCTCTTGGAGGTGGCACTCGACGAGACGCAGCACATCTGGCGCATCCTGAGGCACACGTACAGCCACAACAACATGTGTAGGTATCCGTCGTTCGAGGAGGTGCACGCGAATCGCAGCCAAGACAAGGATGTGAAGAAACGAGGCAGGAAGAGAAAATCGGAGGAGTCGGACCCGAGGACGAAGATCGGCCGACAGAAGGTCGAGCGGCAGAAAGTCGACGAGAAGATCGCGAACAAGCGCAAGTCCGGAGGCCTCGCCACCAAAGAGAAGAAGCAGAGCAGCTCGCCCGTCCCCATAAAACGAGACTCCGCTGTGGGGCTGAAACGTGGACCCCGAAAGATGAAGCGCAAAGAGGCCGAGGACGGGCCTAAGAAACGAGGCGGCAACCGCAAGAAGACCAAGCAAGACACGTCGGACGAAGAGGACGATTGCGCGGCGGTTAACTGTCTACGACCTGGTGgTAAAGAAGTTGATTGGGTTCAGTGTGACGGTGGCTGCGAGGGTTGGTTCCATATGCATTGTGTCGGATTGGATCGCACAGAAATCGCGGAGGAAGACGATTATATATGTAGCAACTGTAAACAGGCCGATCAAAATGCATCGTCAAAAGCGCCAGATCTTCTGGCGGAATCATTAGGCCTGGTTGCacttctttccctttctcggCCCCAGGAACACCACGGCACCACCGACACGGAAGCGGGCGTCTAG
Protein Sequence
MLATGVCSDSSARSSRDGQWQSENRGGGSSRTSQDMACDNRAESDFEFLVPPEAPVFEPTNEEFQDPLAYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGVDTVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKLGKTLSDIKIEPETDANEKRDRDYKPHGIISRQQIKPPNEKFSRRSKRFTGQEEKQDVSIKQEDCKEECDSDTECKDVVKSRYYSPEGPDKIDKSKELKKLQFYGPGPKMAGFNTKEAKKANKTRGLKFVYEFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRDCITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGVATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHSAELCSCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPRNDKIVLAELKELLNEAENKKFPESELLTALTTAVQDAEKCSSVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVSQFQKDAEELESKGDDCDIDKLEKCIEFGDSICIELPQLQRLKQKLMQVQWLEEVKSVQDDPRNVSREDVIKLIEKGMAIPPHFSVENTLSVLHSLTKAIDKWEDKVKVFLQTKNRRTISAVEEFVREADEVEAYLPSLDTLQDMLNKAKNWTKLVNEIQARENFPYYDTLDDLIKKGRNIPLHLDSLPMLESTLSQAKTWKERTARTFLRKNSHCTLMEVLSPRIGVGVQAMKSKKNNKGDESVGAVYVCDTKLDDSSNSANVVAAFKLAEQREMEAMRQLREKNLLKVEVEDSKYCFCRRPRFGIMLQCELCKDWFHSTCVPLPKTSYKGKSSPSRDMRFLCPCCLRSRRPRLETILALLVSLQKISIRLPEGEALQCLTERAMNWQDRARQALATEEISSVVAKLSVMSQKLVEAAAREKTEKIISSELKKAANNPELHKRVQAIAPLSGVHSDDSAFSNTEDDDDVIPIEDEPTCSTFNSNEHAYSYISKIRRKTQSGEGGDPAFGVLSASARSRLEELMMEGDLLEVALDETQHIWRILRHTYSHNNMCRYPSFEEVHANRSQDKDVKKRGRKRKSEESDPRTKIGRQKVERQKVDEKIANKRKSGGLATKEKKQSSSPVPIKRDSAVGLKRGPRKMKRKEAEDGPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPGGKEVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKQADQNASSKAPDLLAESLGLVALLSLSRPQEHHGTTDTEAGV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_00452375; iTF_01087001;
80% Identity
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