Basic Information

Gene Symbol
KDM5A
Assembly
GCA_037043255.1
Location
CM073312.1:12991616-13004593[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 8.7e-26 2.9e-22 79.0 0.0 2 89 139 222 138 222 0.94
2 3 3.2 1.1e+04 -2.9 0.1 49 81 864 894 861 898 0.64
3 3 0.98 3.3e+03 -1.3 0.0 23 59 1515 1547 1497 1569 0.61

Sequence Information

Coding Sequence
ATGGTATCGAAGCTCGATGTAAATATCGGCTCCGAGGCTTCGAGCTTTGCAACGACAACAGCTTCGCGAAATCAAAATCGCTCGCaaacaaaaactttgaaagaatcgcaacaacaacagcaacaaatgGATAATAAACACACGAATCGTGCAACTAAAGAAATGGGAGACAGAAGCGAATCTGATTTCGAGTTTGGGATTCCTCCTGAAGCTCCTGTCTTCGAACCAACCGCTGAAGAGTTCCTCGATCCCCTCGGATACATCGCCAAAATACGGCCGATCGCGGAGAAATCCGGAATTTGCAAGATCAAACCGCCACCCAATTGGCAGCCTCCCTTTGCCGTGGACGTtgacaaattcaaattcgtaCCGAGGATACAGAGGCTCAACGAACTCGAGGCTAAAACTCgaataaaactcaattttttagaTCAAATTGCTAAATTTTGGGAACTTCAAGGATCGTCCTTGAAAATACCTCTCGTTGAGAGGAAAGCGTTGGATCTTTATTCTCTTCACAGAATCGTCACCGAAGAAGGTGGAATTGAAAATGTGACTCGGGAACGAAGGTGGGCCAAGATAGCGAATAAATTGGGCTATCCATCGGGTCGTAGCGTGGGAAGTATTTTGAAGAATCATTACGAGCGAATTCTATATCCGTTCGACGTATTTAAGCAAGGAAAAACTCTGGGACCGTTGAGTGACATCaaatttgaGGCGGAGAATGAATTTCCGGAGAAAAAGGATCGCGATTACAAGCCCCACGGAATAATTTCGCGGCAGCAGATAAAACCGCCGCCAGCCAAGTTTTCTCGACGTTCGAAGCGTTTCGCCGGCGAGGATAAACAGCAGGATGCTGGGACGATCAAGCAGGAGGATTGCAAGGACGAGTGCGACTCGGATCCGGAGTGCAAGCCAAGTTTTAAGCGCGAGAAAGAGGATCCGGACGACAAGGATAGCAAGGAGCTTAAAAAGTTGCAGTTCTACGGGCCTGGCCCAAAAATGGCGGGCTTCAATACCAAAGAaggcggaggaggaggagggggaggcggtaaaaaatcgaacaaaacgCGAGGGGTCAAGTTGACGTACGATTTCGATCCCTTGGCAAAATACATTTGTCACAATTGTGGACGCGGTGATATGGAAGAAAGCATGCTCTTGTGTGACGGTTGCGACGACAGTTATCACACGTTTTGCCTTTTGCCACCGTTGACCGAGATCCCGAAGGGCGATTGGCGGTGTCCAAAGTGCGTGGCCGAGGAGGTCTCAAAGCCCATGGAAGCTTTCGGCTTTGAACAAGCTCAGCGAGAATACACGCTGCAGCAATTTGGCGAAATGGCTGATCAGTTTAAAAGCGATTATTTCAACATGCCCGTCCACATGGTCCCGACCTCACTGGTCGAGAAAGAATTCTGGCGAATCGTTTCCTCCATCGATGAAGACGTCACCGTCGAATACGGCGCCGATCTTCACACCATGGACCATGGCTCTGGATTCCCAACCAAAACCAGCGTCAATCTTTTCACCTGCGATCAAGAATACGCCGAATCAGCCTGGAATCTTAACAATTTACCTGTTCTCGAGGGCAGCGTCTTGGGACACATCAACGCCGATATCAGCGGAATGAAAGTCCCTTGGATGTACGTTGGCATGTGTTTTGCTACTTTCTGTTGGCACAACGAGGACCACTGGAGCtattccattaattatttgcatTGGGGCGAGCCCAAGACTTGGTACGGCGTTCCCGGCTCTCAAgccgaaaaatttgaacactCCATGAAATCCGCCGCTCCGGAACTATTTCACAGTCAACCGGATCTGCTGCATCAACTCGTGACGATCATGAACCCGACGATTCTTACGAACGAAGGCGTTCCGGTATTTCGGACGGATCAGCACGCCGGTGAATTCGTCGTTACATTTCCACGCGCATATCACGCCGGTTTCAATCAAGGTTACAACTTTGCCGAAGCCGTGAATTTCGCCCCAGCCGATTGGCTCAAAGTCGGCCGCGACTGCATTTCTCACTACTCAAACTTGCGTCGCTTCTGCGTTTTTTCGCACGATGAGTTGGTCTGCAAAATGTCCCTGGATCCGGACTCTCTCGACATTGGAATCGCCGCTGCAACTTATCAAGACATGCTGCAAATGGTCGACGACGAGAAAAAGCTTCGAAAGAACTTGCTCGAATGGGGAGTGACCGAAGCCGAAAGAGAAGCTTTCGAATTACTGCCGGACGATGAGAGGCAGTGCGAAGCGTGTAAGACAACGTGTTTTCTGAGCGCTGTGACGTGCTCTTGTCACAGTTCACAATTGGTTTGCCTGCGACACTTTACCGAGCTCTGCAGTTGTTTGCCGGAAAAGCACACGCTGCGCTACCGTTACACACTCGACGAATTGCCCATTATGctgcaaaaattgaaactcaAGGCCGAGTCGTTTGACTCTTGGGTATCCAAGGTCAAAGAGGCCATGGATCCCAAAGGGGAGAAAATCGAATTGACCGAACTTAAGGATTTACTCAACGAGGCCGAGAGcaaaaagtttccggacagcGAACTTCTCACTGCGCTCACAACCGCCGTCCAGGACGCGGAGAAATGCGCCAGCGTCGCTCAACAACTTCTCAACAACAAACAGCGCACAAGGACAAGGCAGTCGGTCGACACAAAATACAAATTGACCGTCGAAGAGTTGACTCTTTTCTACAAGGAAATAACAAATTTGTGTTGCGAGCTTAAAGAATCTGACGGGGTCAAGTACATACTGGACCAGGTAATTCAATTCCAAAAGGACGCGGAGGAATTTGAGAGCAAGGCGAGCGAAGATTGCGACCTTGCAAAACTGGAGAAATGCATAGACTTTGGTGACTCGATATGCATCGAGCTGCCCCAATTGGCgagattgaaacaaaaattgagccAAATACAGTGGCTGGAAGAAGTCAGATCGATGCAGGAAGATTCAAAGTCCATAACCCGCGAAGACGTTGCCAAGTTGTCGGACAAAGGTATGCTCATACCGCCGCATTACAGTATCGAAAAAATGCTCTCGAAGCTGCAAGAATTGATGACGAGCATCGACGCGTGGGAGGAGAAGGCAAAGGTTCATttgaactcgaaaaatcgtcaaaatatcGTCGCTATCGAAGAGATTGTCCAAGAGGCTGATGACATCGACGCTTATTTGCCGAGTCTCGACAGTCTCCAGGATATTCTTACGAAAGCGAAAAActggacgaaaaatgttgaggaGATTCAAGCGCGagagaattttccttattACGACACGCTCGAGGAACTCGTGCGTAAAGGGCGCAACATTCCGCTGCATCTGGATGCTCTACCGATGCTCGAATCCACTCTCTCCCAGGCCAAAGTTTGGAAAGACCGAACTGCCAGGACTTTCTTACGAAAGAATTCTCATTACACTCTCATGGAAGCACTTTCGCCTCGTATCGGTGTCGGTGTTCAAGCTCTCAAGACTAAAAAGAACAAAGGCGACGAGAGTGTCGGCGCTGTTTTCGTTTGTGACACGAAACTCGACGACACCAGCGAATCCGCCGATGTCGTTGCTGCTTTCAAGTTAGCTGAGCAACGCGAAATGGAGGCTATGAGAAATCTGAGGGAAAGAAATCTCGTCAAAGCCAGCCTCGAACACTCGAGGTATTGCGTCTGTCGGAGACCCAGGTTCGGTCTTATGCTCCAGTGCGAATTGTGCAAGGATTGGTTTCATTCCAACTGCGTGCCGCTTCCAAAAACTATGTACAAAGGCAAAGTACAGAACAACCGAGAAACTAAATTCTTGTGTCCCTGTTGTTTGAGATCGAGGAGACCCAGGCTCGAAACGATCCTCGCTCTTCTCGTCAGTctacaaaaaattccaattcgttTACCCGAAGGCGAAGCTCTGCAGTGTCTGACCGAACGTGCAATGAACTGGCAAGATCGTGCGAGACAAGCGCTTGCCACGGACGAGATAAACACGATCCTCACAAGATTGTCCGTACTTTCGCAAAAACTCTCAGAAGCTGCCgcacgagaaaaaacggaaaaaatcatcagcaGCGAGCTTAAAAAAGCTGCAAACAACCCGGAACTCCATCGACGAGTCCAGGCCATCGCTCCTCTCAGCGGTGTCCACTCGGACGACAGTGTTCTCAGCACAGCCgacgacgacgacgacgtggTGACGATCGACGGCGACGAGCCGACCTGCAGCACATTCAACAGCAGCGAACACGCTTATTCCTATGTATcgaaattccaacgaaaatcgCAATCTCAAAACTCGGAGACTTCCGTAGTACTGTCGGAGAAGGCGAGAACGCGGTTAGAGGAGCTCATGATGGAGGGCGACCTGTTGGAGGTTTCTCTGGACGAGACACAGCTCATATGGCGAATCCTCAGTCACACCAACAGTCCGAGCAGCGTGAGAAAGTACGCGGCGTTCGAAGAGGTCCAGTCGAATCTCAATAGTGACATTAAGGACGTGAAAAAACGTGGCAGGAAGAGAAAATCCGACGAGtttgaaatgatgaaaaaactcgGTCGTCAGAAAGTCGATGAGAAGAGTCCGTCGAACGTTGTCAAGCGTAAGGGCGGCTTGAAtaacaaagataaaaaagttgtGGCGCCTGCAGCAGCGACGACAacggcgacgacgacaacgtcAGCGTCGGcgtcgacgacaacgacggCGTCAACGACCACCGCGACGACACCCGGCCCGTTAAAACGCGGACCGCGAAAgATGAAACGAAAGGAGGGCGAAGAACTGCCCAAAAAGCGAGGAGGAAATAGGAAGAAAACGAAGCAAGACACTTCGGACGAGGAGGACGATTGTGCGGCGGTCAGTTGTCTTCGACCGAGTGGTCGCGAGGTAGATTGGGTACAGTGCGACGGCGGTTGCGACGGTTGGTTCCACATGCATTGCGTCGGCTTGGACAGAGCGGAAATCGCCGAGGAGGACGATTACATTTGCAGTAATTGCAAAGATCCCGATCAAAATGCGACGTCGCGAGATGCCGATCCTCGAGACGAATCATTAGGCCTGGATGCACTTCTTTCACTTTCTCAGTCCCAGGGATACCACAGCGCCGATACCGAACCGGAAATACTGGAAACAACCTCCTTCGTCAAGACCTACTAG
Protein Sequence
MVSKLDVNIGSEASSFATTTASRNQNRSQTKTLKESQQQQQQMDNKHTNRATKEMGDRSESDFEFGIPPEAPVFEPTAEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTEEGGIENVTRERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLGPLSDIKFEAENEFPEKKDRDYKPHGIISRQQIKPPPAKFSRRSKRFAGEDKQQDAGTIKQEDCKDECDSDPECKPSFKREKEDPDDKDSKELKKLQFYGPGPKMAGFNTKEGGGGGGGGGKKSNKTRGVKLTYDFDPLAKYICHNCGRGDMEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESAWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAEKFEHSMKSAAPELFHSQPDLLHQLVTIMNPTILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKVGRDCISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIAAATYQDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHFTELCSCLPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKGEKIELTELKDLLNEAESKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVIQFQKDAEEFESKASEDCDLAKLEKCIDFGDSICIELPQLARLKQKLSQIQWLEEVRSMQEDSKSITREDVAKLSDKGMLIPPHYSIEKMLSKLQELMTSIDAWEEKAKVHLNSKNRQNIVAIEEIVQEADDIDAYLPSLDSLQDILTKAKNWTKNVEEIQARENFPYYDTLEELVRKGRNIPLHLDALPMLESTLSQAKVWKDRTARTFLRKNSHYTLMEALSPRIGVGVQALKTKKNKGDESVGAVFVCDTKLDDTSESADVVAAFKLAEQREMEAMRNLRERNLVKASLEHSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTMYKGKVQNNRETKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDEINTILTRLSVLSQKLSEAAAREKTEKIISSELKKAANNPELHRRVQAIAPLSGVHSDDSVLSTADDDDDVVTIDGDEPTCSTFNSSEHAYSYVSKFQRKSQSQNSETSVVLSEKARTRLEELMMEGDLLEVSLDETQLIWRILSHTNSPSSVRKYAAFEEVQSNLNSDIKDVKKRGRKRKSDEFEMMKKLGRQKVDEKSPSNVVKRKGGLNNKDKKVVAPAAATTTATTTTSASASTTTTASTTTATTPGPLKRGPRKMKRKEGEELPKKRGGNRKKTKQDTSDEEDDCAAVSCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRAEIAEEDDYICSNCKDPDQNATSRDADPRDESLGLDALLSLSQSQGYHSADTEPEILETTSFVKTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_01129122;
80% Identity
-