Basic Information

Gene Symbol
KDM5A
Assembly
GCA_943736035.1
Location
CALSEY010000048.1:247496-261411[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5.1e-24 2.4e-20 74.1 0.0 2 89 109 192 108 192 0.94
2 2 4.7 2.2e+04 -2.8 0.1 49 81 818 848 813 852 0.64

Sequence Information

Coding Sequence
ATGGTCTCTAAGGTGGATGTAAATATCGGTCTCGAGGCTCGTTTTCTTGGTACTTATCACGGTAAAGATATGAGTGGTGAAAAAGTTGACACAGATTTTGAGTTCGCAATACCACCTGAGGCACCAGTATTCGAGCCAACAGCCGAAGAATTTCTCGACCCCCTTGGCTACATATCGAAGATACGTCCGATTGCCGAAAAGTCAGGAATATGCAAAATAAAACCACCACCAAACTGGCAGCCACCGTTTGCCGTAGATGTTGACAAATTCAAATTTGTACCACGAATACAAAGGTTGAACGAACTTGAAGCTAAGACAAGAATAAAGTTGAATTTTTTAGATCAAATAGCTAAATTCTGGGAACTTCAAGGATCGTCTTTAAAAATTCCACTCGTCGAAAGAAAAGCATTGGATTTATATTCACTTCATAGAATTGTTACGGACGAAGGTGGAATAGAAATAGTAACAAAAGAAAGAAGATGGGCTAAGATTGCCAACAGGATAGGATATCCGTCTGGTAGAAGCGTCGGTAGTATTTTAAAAAATCATTACGAAAGAATTTTATACCCATTTGACGTTTTTAAACAAGGAAAAACTCTCACAGATATTAAAATAGAACCGGACGCAGATGTAACGGAGAAAAAAGACAGGGACTACAAACCGCACGGTATAATATCACGTCAGCAGATAAAACCGCCTAATGAAAAATTTTCAAGACGTTCAAAGCGGTTTACCGGTACAGACTCGGATAAGCAAGATTTATTAACCGACAATACATCTCCGTTAAAACAAGAGGATTGTAAAGATGAATGCGATTCGGACAACGAAAAGGACAAGGACAATAGCAAGGAGCTTAAAAAACTACAGTTTTATGGACCAGGTCCTAAAATGGCTGGTTTTAATACCAAAGAAGTTAAAAAACCAAGCAAAACCAGAGGCGTTAAATTGCACTATGACTTTGACCCACTGGCCAAATACATTTGTCACAATTGCGGACGAGGAGATACAGAAGAAAGCATGCTGTTATGCGACGGGTGCGACGATAGCTATCACACCTTCTGCCTCATGCCACCTCTTACAGAAATACCAAAGGGTGATTGGAGGTGCCCTAAATGCGTCGCCGAAGAAGTATCAAAGCCCATGGAAGCATTCGGCTTCGAACAAGCCCAAAGAGAATATACTTTACAACAGTTTGGCGAAATGGCCGATCAGTTCAAAAGCGATTACTTCAACATGCCTGTGCATATGGTCCCGACTCCGTTAGTGGAAAAAGAGTTCTGGCGCATCGTATCATCGATAGACGAAGACGTTACCGTCGAATACGGCGCAGATTTACACACGATGGATCACGGCTCTGGTTTTCCAACTAAAACAAGCGTTAATTTGTTCACCTGCGATCAAGAGTACGCAGAATCATCGTGGAACTTAAACAATCTACCAGTTCTTCAAGGCAGCGTTTTGGGACACATTAACGCAGACATTAGCGGTATGAAAGTACCCTGGATGTACGTAGGCATGTGTTTTGCAACTTTTTGCTGGCACAACGAAGACCACTGGAGTTATTCCATCAATTATTTACACTGGGGAGAGCCAAAGACTTGGTACGGCGTTCCCGGATCACAGGCTGAGAGATTTGAACATTCCATGAAATCTGCTGCTCCAGAATTATTCCACAGCCAACCCGACCTACTGCATCAACTCGTCACAATTATGAATCCAAATATATTGATGAACGAAGGAGTACCGGTTTTTAGAACCGATCAACACGCCGGTGAATTTGTCGTTACTTTTCCCAGAGCTTATCACGCCGGCTTTAATCAAGGATATAACTTTGCTGAGGCTGTAAATTTCGCACCAGCTGATTGGCTTAAAATGGGCCGCGAATGTATTTCTCACTATTCAAACTTGAGACGTTTCTGTGTATTCTCGCACGACGAACTTGTATGCAAAATGTCTCTCGATCCAGACTCTCTGGATATCGGTATAGCAACCGCAACTTATCACGATATGCTACAAATGGTTGACGATGAGAAAAAATTGAGAAAAAATCTACTCGAATGGGGCGTAACCGAGGCAGAAAGAGAAGCTTTCGAGCTTTTGCCGGACGACGAAAGACAGTGCGAGGCATGTAAAACTACCTGTTTTTTAAGTGCTGTGACCTGCGCCTGCCACAGTTCGCAGTTAGTTTGCCTAAGGCATTTTACAGAGCTGTGCGATTGCCCGCCGGACAAACATACCCTAAGATATCGTTACACGCTCGATGAGTTACCGATAATGTTGCAGAAGCTTAAACTTAAAGCTGAGTCTTTTGACTCGTGGGTATCGAAGGTAAAGGAGGCGATGGATCCAAAAGGGGATAAAATCGAGCTTACAGAGCTTAAAGAATTGCTAAGCGAAGCAGAGGGCAAGAAATTTCCCGAGAGCGAATTACTCACTGCTCTTACCACCGCCGTACAAGATGCTGAAAAATGCGCTAGCGTTGCTCAACAGCTTTTAAACAACAAACAGAGAACAAGGACCAGGCAGTCTGTCGATACTAAGTACAAACTTACCGTAGAAGAACTGACTCTGTTTTACAAAGAAATAACAAATCTTTGTTGCGAATTGAAGGAGTCGGACGGCGTAAAGTACATATTAGACCAGGTTGTACAGTTTCAAAAAGACGCCGAGGATTTGGAATCTAAAGAAGAAGTTACGGACGTTGATAAACTCGAGAAATGTATTGATTTTGGTGATTCTATATGCATAGAACTGCCGCAGCTTGTTAGACTGAAACAGAGACTGTTGCAAACCCAGTGGCTAGAAGAGGTGAAATCTATTCAAGATGAACCAAAATCAGCGAGCCACGAAGATCTGGCTAAATTAATAGAAAAAGGAATGACCATACCGCCGCATATAAGCATAGAAAACACACTTTCAAAGCTTAAGAATTTGATGTTGAAAATTGAGAAGTGGGAAGATAAGGCGAAGAATTATCTACAGAATAAAAATCGTCAGACTATTTCTACGATAGAAGAATTTTTCAATGAATCTGATGACATAGACGCATATTTACCTAGTCTAGACAATTTACAAGATATATTAACTAAGGCGAAAAATTGGACGAAAAATGTCGAGGATATACAAGCTAAGGAAAATTTTCCTTACTACGATACGTTGGACGATTTAGTACGCAGAGGAAGGAACATACCTCTTCATTTAGACCCGCTTCCTATTCTAGAGTCTACATTGTCACAAGCTAAAGTCTGGAAAGAAAGAACGGCGCGAACTTTTCTGAGGAAGAATTCTCACTACACATTAATGGAGGCTTTATCTCCAAGGATTGGGGTCGGCGTTCAGGCGATGAAAACCAAAAGAAATAAAGGCGAGGAGACAGTCGGCGCTGTATTTGTATGCGATACTAAATTGGACGATACTAACGACTCGGCTAACGTTGTAGCTGCCTTTAAACTAGCCGAACAACGCGAAATGGAAGCTATGAGAAATCTTAGAGAGAGGAATTTGACCAAGACTGAGATAGACGATTCGAGATATTGCGTCTGCCGGAGACCACGCTTTGGACTTATGCTACAGTGCGAGTTGTGCAAGGATTGGTTCCACTCAAACTGCGTGCCTTTACCAAAAACTACGTACAAAGGGAAGCTTCCCATGTCTCGTGAGACCAAATTCCTCTGTCCCTGTTGTCTTAGGTCACGCAGACCTCGGCTAGAGACTATTTTAGCACTTTTAGTAAGTTTACAGAAAATTCCTGTCCGGTTACCGGAGGGCGAAGCTTTGCAGTGTCTTACAGAACGGGCTATGAACTGGCAGGATCGAGCTAGGCAAGCTTTGGCTACGGACGAATTATCATCAGCGCTAGCAAAGCTCTCAGTATTGTCACAGAAGCTTGTCGAAGCTGCGGCGAGGGAAAAAACTGAGAAGATAATAAGCAGCGAGTTAAAAAAGGCGGCGAACAATCCAGAACTACACCAGAGAGTTCAAGCAATCGCTCCACTAAGCGGCGTACATTCCGACGACAGCGTACCCAGCACTGCGGACGACGACGATGACGTTGTAACAATCGAGGACGACGAGCCTACTTGTAGTACGTTTAATAGTAACGAACACGATTATTCGTACGTATCTAAGTTTCAACCGAACAAACTCCAAACCCAAGATCCAGACGCTGCTGTTGTTCTATCGGAGAGCGCAAGATCAAGATTAGAAGAATTAATGATGGAGGGAGACCTGCTCGAGGTAGCTTTAGACGAGACGCAACATATATGGAAGATACTGAGCCACACCAACATACCTAGTAGCGTACAAAAGTACGCAACGTTCGAGGAGGTACAAGCTACTTTCAAACACGATATGAAAGACGTTAAGAAACGTGGTAGAAAACGTAAATCCGAGGAGTTTGAAATGTTGAAAAAACTGGGTAGGCAAAAGGTCGAGGCTGAAAACAAGAACGTTGTAGTCAAACGCAAAGGTGGTAGCGGTGGAGGCGGAGGTGGAGGCGGCGGGGCCATAAATAAAGATAAAAAGATCTTCGTTGCTGTTGGACCGATAAAAAAAGGGCCCAGAAAGATGAAACGTAAGGAGGGAGAAGAGGGACCCAAAAAACGAGGCGGTAACAGAAAAAAAACTAAACAAGATACTTCGGACGAGGAGGACGACTGCGCTGCTGTTAGCTGCCTTCGTCCAAGTGGACGAGAAGTCGACTGGGTCCAGTGTGACGGAGGATGCGACGGATGGTTTCACATGCATTGCGTGGGTTTGGATCGAGCTGAAATCGCAGAAGAGGATGATTACATATGCAGTAATTGCAAAGACGGGGAACAGAATATCACGTTGGGAGGAACAGATCCCGACGATGAATCATTAGGGCTGGATGCTCTTCTATCGCTTTCTCAATCTCAGGGATACAACAGCGGAGATACCGAGCCCGATATACAAGAAAGTTCTACGTTCGTCAGGACTTATTAA
Protein Sequence
MVSKVDVNIGLEARFLGTYHGKDMSGEKVDTDFEFAIPPEAPVFEPTAEEFLDPLGYISKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTDEGGIEIVTKERRWAKIANRIGYPSGRSVGSILKNHYERILYPFDVFKQGKTLTDIKIEPDADVTEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFTGTDSDKQDLLTDNTSPLKQEDCKDECDSDNEKDKDNSKELKKLQFYGPGPKMAGFNTKEVKKPSKTRGVKLHYDFDPLAKYICHNCGRGDTEESMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTPLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLQGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILMNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCACHSSQLVCLRHFTELCDCPPDKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKGDKIELTELKELLSEAEGKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEDLESKEEVTDVDKLEKCIDFGDSICIELPQLVRLKQRLLQTQWLEEVKSIQDEPKSASHEDLAKLIEKGMTIPPHISIENTLSKLKNLMLKIEKWEDKAKNYLQNKNRQTISTIEEFFNESDDIDAYLPSLDNLQDILTKAKNWTKNVEDIQAKENFPYYDTLDDLVRRGRNIPLHLDPLPILESTLSQAKVWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKRNKGEETVGAVFVCDTKLDDTNDSANVVAAFKLAEQREMEAMRNLRERNLTKTEIDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTTYKGKLPMSRETKFLCPCCLRSRRPRLETILALLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALATDELSSALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSVPSTADDDDDVVTIEDDEPTCSTFNSNEHDYSYVSKFQPNKLQTQDPDAAVVLSESARSRLEELMMEGDLLEVALDETQHIWKILSHTNIPSSVQKYATFEEVQATFKHDMKDVKKRGRKRKSEEFEMLKKLGRQKVEAENKNVVVKRKGGSGGGGGGGGGAINKDKKIFVAVGPIKKGPRKMKRKEGEEGPKKRGGNRKKTKQDTSDEEDDCAAVSCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRAEIAEEDDYICSNCKDGEQNITLGGTDPDDESLGLDALLSLSQSQGYNSGDTEPDIQESSTFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_01199923;
80% Identity
-