Basic Information

Gene Symbol
KDM5A
Assembly
GCA_949825005.1
Location
OX463765.1:16932213-16945654[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.1e-25 8.3e-22 78.0 0.0 2 89 85 168 84 168 0.94
2 2 4.8 1.9e+04 -3.3 0.1 49 81 798 828 795 831 0.61

Sequence Information

Coding Sequence
ATGAGCGACAGGAACGACAGTGATTTCGAGTTCGCGACACCACCGGAGGCCCCGGTTTTCGAACCCACGACCGAGGAGTTCCTAGACCCGCTCGGATACATTGCCAAGATACGTCCCATCGCCGAGAAGTCCGGTATCTGCAAGATCAAACCGCCTCCCAACTGGCAACCACCATTTGCCGTAGATGTGGACAAGTTCAAGTTCGTACCGAGAATTCAAAGACTAAATGAACTAGAAGCGAAGACAAGAATCAAGTTAAACTTTCTTGATCAAATCGCTAAGTTTTGGGAACTTCAAGGGTcgtctttaaaaattcctctGGTCGAGAGAAAAGCGCTCGATTTATATTCCCTTCACAGAATAGTTACAGACGAAGgTGGAATAGAAACAGTAACGAAAGAGCGAAGATGGGCAAAGATAGCAAACAAACTCGGATACCCCTCTGGCAGGAGTGTGGGGAGTATTTTGAAGAACCACTACGAAAGAATTTTATACCCATTCGATGTATTCAAGCAAGGAAAAACTTTGGCAGATATCAAAATCGAACCAGAACCAgatgttaatgaaaaaaaggatcgAGATTATAAACCACATGGTATTATTTCACGACAACAAATAAAACCCCcaaatgagaaattttctcGCAGATCGAAGAGGTTCGCGGGTCAAGATGACAAACAAGACGCGAATGCCTCGGTTAAGCAGGAAGATTGCAAGGACGAATGCGATTCGGATAATGAAACTAAGAGGAGGGAGAAATTGAGATACGATTTGGGTGACAACAGCAAGGAGCTAAAGAAACTACAGTTTTATGGCCCTGGTCCGAAAATGGCTGGTTTTAATACCAAAGACtctaaaaaatcaaacaaaacGAGGGGTTTGAAACTCACTTATGAATTTGATCCAcTCGCAAAATACATTTGTCACAACTGCGGTAGAGGCGATAACGAGGAAAATATGTTACTCTGTGATGGTTGCGATGATAGTTATcatactttttgtttgttaccACCGTTGACTGAAATCCCCAAGGGAGATTGGAGGTGTCCGAAATGCGTGGCCGAAGAAGTATCGAAGCCGATGGAAGCATTTGGTTTCGAACAAGCCCAAAGAGAGTACACCTTGCAACAGTTCGGCGAAATGGCAGATCAGTTCAAGAGTGATTACTTCAACATGCCAGTTCACatGGTTCCAACTTCATTGgtcgaaaaagaattttggcGGATAGTTTCATCGATAGACGAAGATGTCACTGTCGAATATGGCGCAGACTTGCACACAATGGATCACGGATCGGGATTTCCAACGAAAACAagtgtaaatttatttacctgTGATCAGGAATACGCTGAATCTTCATGGAACTTAAATAACTTGCCAGTATTGAGAGGAAGTGTTCTTGGTCATATTAATGCAGATATTAGTGGTATGAAAGTACCTTGGATGTACGTCGGTATGTGCTTTGCTACATTCTGTTGGCATAACGAAGACCACTGGAGTTACTCCATTAATTATCTTCATTGGGGAGAGCCGAAGACATGGTATGGCGTACCTGGGGCACAAGCCGAACGTTTCGAACACTCAATGAAGTCAGCTGCGCCCGAATTGTTCCACAGCCAGCCGGATTTGTTGCACCAACTTGTGACAATCATGAATCCTAATATTCTGATTAATGAAGGAGTACCAGTATTTCGTACCGATCAACACGCAGGTGAATTCGTAGTCACGTTTCCACGAGCTTATCACGCTGGTTTCAATCAGGGGTACAATTTCGCCGAAGCTGTCAATTTTGCACCCGCTGATTGGCTAAAAATGGGCAGAGAATGCATCACACATTATTCAAATCTGAGACGTTTCTGCGTTTTTTCGCATGATGAGCTGGTCTGCAAGATGTCTTTGGACCCTGATTCGTTAGACATCGGCATCGCAACTGCTACATATCATGACATGCTACAGATGGTGGATGATGAGAAGAAACTTCGTAAAAATCTCCTAGAATGGGGAGTCACAGAAGCTGAAAGAGAGGCGTTTGAGTTATTACCAGACGACGAAAGACAATGTGAAGCTTGTAAGACGACTTGTTTTCTCAGTGCGGTCACATGTTCGTGTCACAATTCGCAGCTGGTGTGCTTAAGACACTTTGCTGACCTCTGCGAATGTTCACCGGAGAAGCATACACTTAGATATCGATACACCTTGGATGAATTGCCgataatgttacaaaaattgaaactcaaaGCGGAGTCCTTCGACTCATGGGTATCCAAAGTCAAAGAGGCTATGGATCCCAAGGGTGACAAGATCGAGCTGAACGAGTTGAAAGAACTTTTAAACGAGGCTGAAACTAAGAAGTTTCCCGAGAGTGAACTTTTAACGGCACTTACCACAGCTGTTCAAGATGCAGAAAAATGTGCCAGCGTGGCTCAACAGCTTTTGAACAACAAACACAGAACAAGaacAAGGCAATCCGTCGACACGAAATACAAATTAACAGTCGAagaattaacattattttacaaagaaataacAAACCTATGTTGCGAACTCAAAGAATCGGATGgtgtaaaatatattctagATCAGGTCCTACAGTTCCAAAAAGACGCGGAAGATTTGGAATCCAAGGAGGATGACTGCGATGtcgagaaattagaaaaatgtatcgaGTTCGGTGACTCGATTTGTATAGAGTTACCTCAGCTCACGCGTCTCAAACAAAAGTTAACGCAGATACAGTGGCTGGAGGAGGTGAAATTGATACACGAGGATCCAAAGTCCGCGAGTCGCGAGGATATTGCGAAAATAGTCGAGAAAGGAATGACAATACCGCCTCACTCTAGCATCGAAACGGCACTCGCTAAGTTACAAGCCTTGATGCTGAATATCGACAAATGGGAGGAGAGGGCGAAAACGTACTTGCAGACGAAAAACAGACAAACTATATCGGCGGTGGAAGAATTTTTGCACGAAGCGGAGGAGATCGAAGCTTACTTGCCGAGTTTAGACAGTCTCCAAGATATCGTTAATAAGGCGAAAACTTGGAGAAAAACGGTCGAGGAGATTCAGGCGCGCGAGATTTTCCCGTATTACGATACCCTGGATGATCTCGTGCGCAAGGGAAGAAATATCCCATTACATTTGGATTCGTTACCACTTTTGGAGTCGACGATATCGCAAGCCAAGGGTTGGAAAGAGAGAACGGCCCGGACATTCcttagaaaaaattcacattacACGTTAATGGAAGCGTTGTCACCCCGAATCGGTGTAGGCGTGCAAGCCATGAAAACGAagaagaacaataaaaatgacGATAGTTACGGAGCTGTTTACGTCTGTGATACGAAGCTCGACGATTCCAACGATTCCGCTACGGTTGTCGCCGCTTTCAAATTAGCCGAACAGAGAGAAATGGAAGCCATGAGGAATTTGAGGGAACGTAACATTCTCAAAATGGACCTTAGCGATTCCAGGTATTGCGTTTGTCGTAAACCAAGATTTGGGATGATGCTCCAATGTGAACTCTGCAAGGATTGGTTTCACTcaAATTGTGTGCCTTTACCGAAGACATCGTATAAAGGGAAATTACCAATGTCACGGGACGTCAAGTTTCTGTGTCCCTGTTGCTTGAGGTCACGGAGACCGCGATTAGAAACCATCCTAGCGCTTTTGGTGAgccttcaaaaaattccaattcgtcTACCAGAAGGAGAAGCGCTGCAGTGTCTCACGGAACGAGCTATGAACTGGCAGgaTCGAGCGAGACAAACTTTGGCAACGGAGGAACTTTCATCGGTTCTTGCAAAATTATCAGTCTTATCTCAGAAATTGGTAGAAGCTGCAGCGAgagaaaaaacagaaaaaattataagtagTGAATTAAAGAAAGCTGCTAACAATCCAGAATTGCATCAGAGGGTACAAGCTATAGCTCCACTCAGTGGTGTTCATTCGGATGATAGCGTTCCCAGTACAGCTgatgacgatgacgacgacgacgatgaagaTGTTTTGACAATTgacgatgaagagccatcttGCAGCACGTACAACAACAGTGAACACGCTTATTCTTATGtATCCAAACTACAGAGGAAGTCACAGTCCCACGATAGTGAAGGAAATACCATATCGTTATCATCAAATGCGAGGGAAAGATTAGAAGAATTAATGATGGAAGGAGATCTTTTAGAAGTAGCATTAGACGAAACACAACATATATGGCGTATTCTTAGTCACACGAGCAATCCGACTACAGTAAGGACGTATGCGAATTTCGATCGAACGCAAGCCAATTATAGCTCCGATGGGAAAGACGTTAAAAAGCGTGGCAGAAAACGAAAATCGGACGAgttcgaattattaaaaaaacttggTAGGCAGAAATTGGACGACAAAGCTGTGATAAAACGCAAAGGATTGCCCAAAGATAAGAAACAACTTAACGTACCGGGTCAAGCAGCGTTAAAACGTGGCCCCCGGAAGATCAAGCGGAAGGAGGGCGAGGAAATTCCGAAGAAACGGGGTGGCAATCGCAAGAAAACTAAACAAGACACTTCCGATGAAGAGGAAGATTGCGCCGCCGTCAATTGCCTTCGGCCGAATGgACGGGAAGTCGATTGGGTTCAATGCGATGGCGGATGCGATGGTTGGTTCCATATGCATTGTGTGGGTTTGGATCGAACCGAACTTGCGGAAGAAGACGATTACATTTGTAGTAATTGCAAAGAACCCGATCAAAATGTTTCATCATCTGCAAATTCTGATAGAGGTCCGGATCCGTTAGCAGAATCCTTAGGATTGGACGcgttgttatcattatcgcAAGGATGTCACGGCGACAACGAATCCGAGATCCAAGAAACAGCATCGTTTGTCCGAACATACTAA
Protein Sequence
MSDRNDSDFEFATPPEAPVFEPTTEEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTDEGGIETVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLADIKIEPEPDVNEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFAGQDDKQDANASVKQEDCKDECDSDNETKRREKLRYDLGDNSKELKKLQFYGPGPKMAGFNTKDSKKSNKTRGLKLTYEFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGAQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILINEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHNSQLVCLRHFADLCECSPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKGDKIELNELKELLNEAETKKFPESELLTALTTAVQDAEKCASVAQQLLNNKHRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVLQFQKDAEDLESKEDDCDVEKLEKCIEFGDSICIELPQLTRLKQKLTQIQWLEEVKLIHEDPKSASREDIAKIVEKGMTIPPHSSIETALAKLQALMLNIDKWEERAKTYLQTKNRQTISAVEEFLHEAEEIEAYLPSLDSLQDIVNKAKTWRKTVEEIQAREIFPYYDTLDDLVRKGRNIPLHLDSLPLLESTISQAKGWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKKNNKNDDSYGAVYVCDTKLDDSNDSATVVAAFKLAEQREMEAMRNLRERNILKMDLSDSRYCVCRKPRFGMMLQCELCKDWFHSNCVPLPKTSYKGKLPMSRDVKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQTLATEELSSVLAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSVPSTADDDDDDDDEDVLTIDDEEPSCSTYNNSEHAYSYVSKLQRKSQSHDSEGNTISLSSNARERLEELMMEGDLLEVALDETQHIWRILSHTSNPTTVRTYANFDRTQANYSSDGKDVKKRGRKRKSDEFELLKKLGRQKLDDKAVIKRKGLPKDKKQLNVPGQAALKRGPRKIKRKEGEEIPKKRGGNRKKTKQDTSDEEEDCAAVNCLRPNGREVDWVQCDGGCDGWFHMHCVGLDRTELAEEDDYICSNCKEPDQNVSSSANSDRGPDPLAESLGLDALLSLSQGCHGDNESEIQETASFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
-
80% Identity
-