Rchl011361.1
Basic Information
- Insect
- Rhogogaster chlorosoma
- Gene Symbol
- KDM5A
- Assembly
- GCA_944452905.1
- Location
- CALYCC010000051.1:934165-945617[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-24 9.6e-21 74.9 0.0 2 89 109 192 108 192 0.94 2 2 3.3 1.7e+04 -2.8 0.1 49 81 817 847 812 851 0.64
Sequence Information
- Coding Sequence
- ATGGTCTCTAAGGTGGATGTAAATATCGGTTCCGAGGCTCGGTTCGGTGGCTGCACTTACCACGGTAAAGATATGAGTGAAAAAGGTGACACGGATTTTGAGTTCGCGATACCACCGGAGGCACCAGTGTTCGAGCCAACAGCCGAGGAATTCCTCGACCCCCTTGGCTACATCTCGAAGATTCGTCCGATTGCCGAAAAGTCAGGGATATGCAAAATAAAACCACCACCAAACTGGCAGCCACCGTTCGCAGTAGACGTCGACAAGTTCAAATTTGTCCCCAGAATTCAAAGGCTGAACGAACTCGAGGCAAAGACGAGAATAAAGCTTAATTTTTTAGACCAAATAGCAAAATTTTGGGAACTACAGGGATCATCGTTGAAAATACCACTCGTCGAAAGAAAGGCTTTGGACTTGTATTCTCTCCATAGAATTGTCACCGAGGAAGGTGGGATTGAAATAGTAACTAAAGAGAGAAGATGGGCGAAGATTGCCAACAGGATAGGATATCCGTCTGGTCGTAGCGTCGGAAGTATCTTGAAGAATCATTACGAGAGAATTTTGTACCCCTTTGACGTTTTCAAACAAGGAAAAACACTAACTGATATCAAAATAGAGCCGGACGCCGATGTGAATGAGAAAAAAGACCGGGACTACAAACCCCACGGGATAATATCACGCCAGCAGATAAAACCGCCTAACGAAAAGTTCTCAAGGCGATCAAAGCGGTTCGCTGGTACAGACGAGAAGCCCGACTTACTCAACGACAACACATCTCCCTTGAAGCAAGAGGATTGCAAGGACGAATGCGACTCTGACAATGAAAAGGACAAGGATAACAGCAAGGAACTTAAAAAACTACAGTTTTATGGACCCGGTCCTAAGATGGCCGGTTTTAATACCAAAGATGTTAAAAAACCGAGCAAAACCAGAGGCGTAAAATTACACTACGACTTTGACCCGCTGGCCAAATACATTTGTCACAATTGCGGAAGAGGCGACACAGAGGAAAGCATGCTATTGTGCGACGGGTGCGACGACAGCTATCACACCTTCTGCCTCATGCCACCGCTCACAGAAATACCAAAGGGGGATTGGAGGTGTCCGAAATGCGTCGCTGAGGAGGTGTCCAAGCCCATGGAAGCATTCGGCTTCGAACAAGCCCAGAGAGAATACACGCTGCAACAGTTCGGCGAAATGGCTGACCAGTTCAAAAGCGATTACTTCAACATGCCTGTGCATATGGTGCCAACCCCCCTGGTGGAAAAGGAATTCTGGCGCATCGTCTCCTCGATAGACGAAGACGTGACCGTCGAGTACGGCGCGGATTTACACACGATGGATCACGGCTCGGGTTTTCCTACCAAAACTAGCGTCAATCTATTCACCTGCGATCAGGAGTACGCCGAGTCCTCTTGGAACCTCAACAACCTGCCCGTGCTGCAGGGCAGCGTCCTCGGACACATAAACGCAGACATTAGCGGGATGAAGGTCCCCTGGATGTACGTCGGCATGTGCTTTGCCACTTTCTGCTGGCACAACGAAGACCACTGGAGCTACTCCATCAATTATCTGCACTGGGGGGAGCCCAAGACTTGGTACGGGGTCCCCGGCTCGCAGGCCGAGAGGTTTGAACATTCCATGAAATCCGCTGCTCCGGAATTATTCCACAGCCAGCCCGACCTCCTGCATCAACTCGTCACGATTATGAACCCCAACATACTGATGAACGAAGGGGTTCCGGTCTTCAGAACCGACCAACACGCCGGCGAATTCGTCGTCACTTTTCCGAGGGCTTATCACGCGGGATTTAATCAAGGCTACAACTTTGCAGAGGCTGTGAATTTCGCGCCGGCTGATTGGCTTAAAATGGGCCGCGAATGTATTTCCCACTACTCAAACCTGAGACGTTTCTGCGTATTTTCTCACGACGAACTTGTTTGCAAAATGTCCCTCGATCCGGACTCTCTGGACATCGGTATAGCCACCGCAACTTATCACGACATGCTGCAAATGGTCGACGACGAGAAAAAACTTAGGAAAAATCTGCTCGAGTGGGGCGTAACGGAGGCCGAAAGAGAAGCCTTCGAGCTTTTGCCGGACGACGAAAGGCAGTGCGAGGCATGTAAAACGACCTGTTTTTTGAGTGCTGTGACCTGCGCTTGCCACAGTTCGCAGTTGGTTTGCCTGAGGCATTTTACGGAGCTGTGCGATTGCCCCCCGGACAAACACACCCTAAGATATCGTTACACGCTCGATGAGTTGCCGATAATGTTGCAGAAGCTTAAACTAAAAGCCGAGTCGTTCGACTCGTGGGTGTCGAAGGTTAAGGAGGCGATGGACCCGAAAGGAGACAAAATCGAGCTCACAGAGCTGAAAGAATTGCTCAGCGAAGCGGAGGGCAAGAAGTTTCCCGAGAGCGAACTTCTCACCGCTCTAACCACCGCGGTACAAGACGCCGAAAAATGCGCCAGCGTTGCTCAGCAACTTTTGAACAACAAGCAGAGGACAAGGACCAGGCAGTCTGTCGATACCAAGTACAAACTTACAGTCGAAGAGCTCACCCTATTCTACAAAGAAATAACAAATCTTTGTTGCGAACTGAAGGAGTCTGACGGCGTTAAGTACATATTAGACCAGGTTGTACAGTTTCAAAAGGACGCCGAGGACCTGGAATCCAAAGAAGAGGTCGCCGACATTGATAAGCTCGAGAAATGTATAGACTTTGGTGATTCCATATGCATAGAGCTGCCGCAGCTTGTTCGACTGAAACAGAGACTGTTGCAAACCCAGTGGCTGGAAGAGGTGAAGTCCATTCAAGAAGAGCCAAAGTCAGTGAGCCACGAAGACTTGGCCAAACTGATAGAGAAAGGAATGACCATACCGCCGCATATAAGCATAGAAAACACCCTCTCGAAGCTGAAGAATTTGATGTTGAAGATCGAGAAGTGGGAAGACAAGGCGAAGAATTATATTCAGAATAAAAATCGCCAGAGTATAATCACGATAGAAGAATTCTTCAAGGAATCTGACGCCATAGACGCGTATCTACCCAGTCTAGACAATTTACAGGACATATTGACCAAGGCTAAAAATTGGACAAAAAATGTCGAGGATATACAAGCTAAGGAGAACTTTCCCTACTACGATACGTTGGACGATTTGGTGCGCAGGGGGAGGAGCATTCCTCTTCATTTAGACCCGCTGCCTATTCTCGAGTCTACATTGTCACAGGCAAAGGTGTGGAAGGAAAGAACGGCGCGGACGTTTCTCAGGAAGAATTCTCACTACACATTAATGGAGGCTCTCTCCCCGAGGATCGGGGTCGGCGTTCAGGCCATGAAAACAAAGAGAAATAAAGGCGAGGAGACGGTCGGCGCTGTGTTTGTATGCGACACTAAATTGGACGACACCAATGACTCGGCCAACGTTGTGGCGGCCTTCAAACTCGCGGAACAACGCGAAATGGAAGCTATGAGGAATCTTAGAGAGAGGAATTTGACCAAGACTGAGATGGATGACTCGAGATACTGCGTCTGCCGGAGACCACGATTCGGACTTATGCTACAGTGCGAGTTGTGCAAGGATTGGTTTCACTCAAACTGCGTGCCTTTACCAAAAACCACGTACAAAGGGAAGCTCCCCATGTCTCGGGAGACGAAATTCCTCTGCCCCTGCTGCCTCAGGTCCCGCAGACCCCGGCTAGAGACTATTTTAGCACTTTTAGTAAGTTTGCAGAAGATTCCTGTCCGGTTACCGGAAGGCGAAGCCCTGCAGTGTCTCACGGAACGAGCTATGAACTGGCAGGATCGGGCCAGGCAGGCTTTGGCCACCGACGAACTGTCCACCGCCCTAGCCAAGCTTTCGGTCTTGTCCCAGAAACTCGTCGAGGCTGCGGCCAGGGAGAAAACCGAAAAGATCATCAGCAGCGAACTGAAAAAGGCCGCAAACAACCCAGAACTGCATCAACGAGTCCAAGCCATCGCTCCACTAAGCGGCGTACATTCCGACGACAGCGTACCCAGCACTGCTGACGACGACGAGGACGTTGTAACGATCGAGGACGACGAGCCTACTTGTAGTACGTTTAATAGTAACGAACACGATTATTCGTACGTTTCCAAGTTTCAACCGAACAAACTCCACGCCCAGGACCCCGACGCGGCTGTGGTTCTGTCGGAGAGCGCCAGGGCCAGGTTAGAAGAGTTGATGATGGAGGGAGACCTGCTCGAGGTAGCCTTGGACGAGACGCAACACATATGGAAGATACTCAGCCACACCAACATACCGAGCAGCGTACAGAAGTACGCGACTTTCGAGGAGGTGCAGGCGACCTTCAAACACGATATGAAGGACGTGAAGAAACGCGGGAGGAAACGCAAGTCCGAGGAGTTCGAATTGCTGAAGAAACTCGGGCGGCAAAAGGTCGACGATAAGAACGTGGCTAAGCGCAAGGGAATGAACAAGGAGAAGAAGATATTCGTGGCTGTTGGACCGATGAAAAGAGGGCCTAGAAAGATGAAACGCAAGGAGGGGGAGGAGGGACCCAAGAAACGCGGCGGGAACAGGAAGAAGACTAAACAAGACACTTCTGACGAGGAGGACGACTGTGCTGCGGTCAACTGCCTTCGTCCCAGCGGACGGGAAGTCGACTGGGTCCAGTGTGACGGAGGATGCGACGGATGGTTCCACATGCATTGCGTCGGTTTGGACCGTGCCGAAATCGCGGAGGAGGACGATTATATATGCAGTAATTGCAAAGACGGGGAACAGAATATCACGTTGGCAGGGACAGATCCCGACGATGAATCATTAGGGCTGGATGCGCTTCTTTCGCTTTCTCAATCTCAGGGATACAACAGCGGAGATACAGAGCCGGATATACAGGAAACTTCTACGTTCGTCAGGACTTACTAA
- Protein Sequence
- MVSKVDVNIGSEARFGGCTYHGKDMSEKGDTDFEFAIPPEAPVFEPTAEEFLDPLGYISKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTEEGGIEIVTKERRWAKIANRIGYPSGRSVGSILKNHYERILYPFDVFKQGKTLTDIKIEPDADVNEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFAGTDEKPDLLNDNTSPLKQEDCKDECDSDNEKDKDNSKELKKLQFYGPGPKMAGFNTKDVKKPSKTRGVKLHYDFDPLAKYICHNCGRGDTEESMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTPLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLQGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILMNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCACHSSQLVCLRHFTELCDCPPDKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKGDKIELTELKELLSEAEGKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEDLESKEEVADIDKLEKCIDFGDSICIELPQLVRLKQRLLQTQWLEEVKSIQEEPKSVSHEDLAKLIEKGMTIPPHISIENTLSKLKNLMLKIEKWEDKAKNYIQNKNRQSIITIEEFFKESDAIDAYLPSLDNLQDILTKAKNWTKNVEDIQAKENFPYYDTLDDLVRRGRSIPLHLDPLPILESTLSQAKVWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKRNKGEETVGAVFVCDTKLDDTNDSANVVAAFKLAEQREMEAMRNLRERNLTKTEMDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTTYKGKLPMSRETKFLCPCCLRSRRPRLETILALLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALATDELSTALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSVPSTADDDEDVVTIEDDEPTCSTFNSNEHDYSYVSKFQPNKLHAQDPDAAVVLSESARARLEELMMEGDLLEVALDETQHIWKILSHTNIPSSVQKYATFEEVQATFKHDMKDVKKRGRKRKSEEFELLKKLGRQKVDDKNVAKRKGMNKEKKIFVAVGPMKRGPRKMKRKEGEEGPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRAEIAEEDDYICSNCKDGEQNITLAGTDPDDESLGLDALLSLSQSQGYNSGDTEPDIQETSTFVRTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01103329;
- 90% Identity
- iTF_01199923;
- 80% Identity
- -