Basic Information

Gene Symbol
Kdm5a
Assembly
GCA_963924015.1
Location
OZ001264.1:1502585-1514332[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2e-24 7.8e-21 74.9 0.0 2 89 108 191 107 191 0.94
2 2 3.7 1.3e+04 -2.7 0.1 49 81 816 846 811 850 0.64

Sequence Information

Coding Sequence
ATGGTCTCTAAGGTGGATGTAAATATCGGTTCCGAGGCTCGGTTTGTTGGTACTTATCACGGTAAAGATATGAGTGAAAAAGGTGACACGGATTTTGAGTTCGTAATACCACCGGAGGCACCAGTATTCGAGCCAACAGCCGAGGAATTCCTCGACCCCCTTGGCTACATCTCGAAGATTCGTCCAATTGCCGAAAAGTCAGgaatttgcaaaataaaacCACCACCAaACTGGCAACCACCCTTTGCAGTTGATGttgataaattcaaatttgtacCAAGAATCCAGAGGCTAAATGAACTCGAAGCCAAGACCAGAATAAAGCTTAATTTTTTAGACCAAATAGCTAAATTCTGGGAACTCCAAGGATCTTCATTAAAAATTCCACTCGTTGAAAGAAAAGCATTAGACTTATACTCACTGCACAGAATTGTCACTGAGGAAGgTGGCATAGAAATAGTtacaaaagaaagaagatgGGCAAAAATTGCAAACAGGATAGGATATCCGTCTGGTCGAAGTGTAGgaagtattttaaaaaatcattacgaaagaattttatatcccTTTGACGTTTTCAAACAAGGAAAAACTCTCACAGACATTAAAATGGAACCAGATTCAgatgtgaatgaaaaaaaggatcGGGATTATAAACCACATGGTATAATATCACGCCAGCAGATAAAACCACCAAATGAAAAGTTCTCAAGACGTTCAAAGCGGTTTGCCGGTACAGATGAAAAGCCAGATTTACTAACGGACAATACCTCTCCTTTGAAGCAAGAGGATTGTAAAGATGAATGTGACTCTGACAACGAAAAGGACAAGGACAACAGCAAAGAGCTTAAAAAACTACAATTTTATGGACCCGGTCCTAAAATGGCCGGTTTTAATACCAAAGATGTTAAAAAACCGAGCAAAACCAGAGGCGTTAAATTGCACTATGACTTTGACCCACTCGCCAAATACATTTGTCATAATTGTGGAAGAGGAGACACAGAAGAAAGTATGCTGTTATGTGATGGATGCGACGACAGTTATCACACATTTTGCCTACTGCCACCTCTGACAGAAATACCAAAGGGGGATTGGAGGTGCCCAAAATGCGTCGCTGAAGAGGTCTCAAAGCCCATGGAAGCCTTTGGCTTTGAACAAGCTCAAAGGGAATACACATTACAACAATTCGGCGAAATGGCTGACCAGTTCAAAAGCGATTACTTCAATATGCCTGTGCACatgGTGCCAACCCCTTTAGTAGAGAAAGAGTTCTGGCGCATTGTGTCTTCGATAGACGAAGATGTGACTGTCGAGTATGGCGCAGATTTACACACAATGGATCACGGCTCTGGTTTTCCAACAAAAACAAGCGTCAATTTGTTCACCTGTGATCAAGAGTACGCCGAATCATCGTGGAACCTGAACAACCTACCAGTCCTTCAGGGCAGCGTATTAGGACACATTAATGCCGACATTAGCGGGATGAAAGTCCCCTGGATGTACGTAGGGATGTGCTTTGCAACCTTTTGCTGGCACAATGAAGATCACTGGAGTTATTCTATCAACTACTTGCACTGGGGAGAGCCCAAGACTTGGTACGGGGTCCCTGGATCCCAGGCTGAGAGATTTGAACATTCCATGAAATCTGCTGCTCCAGAATTATTCCACAGTCAACCCGACCTCCTGCATCAACTCGTCACAATTATGAACCCAAACATTTTGATGAACGAAGGTGTTCCAGTATTCAGAACTGATCAACACGCCGGCGAATTTGTTGTTACTTTTCCCAGAGCTTATCACGCTGGTTTTAATCAAGGGTACAACTTTGCAGAGGCAGTAAATTTCGCACCGGCTGATTGGcttAAAATGGGCCGCGAATGTATATCTCATTACTCTAACTTGAGACGTTTTTGTGTATTTTCACACGATGAACTTGTCTGCAAAATGTCCCTGGATCCAGACTCTTTAGACATTGGTATAGCCACGGCAACTTATCACGACATGCTGCAAATGGTAGACGATGAGAAAAAACTTCGTAAAAATCTTCTGGAATGGGGCGTAACGGAGGCAGAAAGAGAAGCCTTTGAGCTTTTGCCGGACGACGAAAGGCAGTGCGAGGCATGTAAAACGACTTGTTTTTTAAGTGCTGTGACGTGCGCTTGCCACAGTTCGCAGTTGGTTTGCCTAAGGCATTTTACAGACCTGTGCGATTGCCCTCCGGACAAACATACTCTAAGATATCGTTACACGCTCGATGAGTTACCGATAATGTTGCAAAAGCTTAAACTCAAAGCTGAGTCTTTTGACTCATGGGTAACCAAGGTCAAGGAGGCAATGGATCCAAAAGGAGATAAAATCGAACTTACAGAACTCAAAGAATTGCTCAGCGAAGCTGAGGGCAAGAAGTTTCCTGAGAGCGAACTCCTCACTGCTCTTACCACCGCAGTACAAGACGCTGAAAAATGCGCCAGTGTTGCTCAGCAGCTTTTAAATAACAAGCAGAGAACAAGgaCCAGGCAGTCTGTAGATACTAAATACAAGCTCACTGTCGAAGAGCTAACTCTGTTTTATAAGGAAATAACAAATCTTTGTTGTGAATTAAAAGAGTCCGACGGCGTCAAGTACATATTAGATCAAGTTGTACAGTTTCAAAAAGATGCAGAGGATTTAGAATCTAAAGAAGAAGTTTCCGACATTGAAAAACTTGAGAAGTGTATCGATTTTGGTGATTCTATTTGCATAGAGTTGCCGCAACTCGTTCGACTGAAACagAGACTGTTGCAAACTCAGTGGCTAGAAGAAGTGAAATCAATTCAAGAGGAGCCAAAATCAGCTAGCCACGAGGATCTGgctaaattattagaaaaaggAATGACCATCCCACCTCATATAAGCATAGAAAACACGCTTTCAAAGCTCAAGAATTTGATGTTAAAAATCGAGAAGTGGGAAGAGAAGGCAAAGACTTATCTTCAGAATAAAAATCGTCAGACTATAGTAACAatagaagaatttttcaaagaatctgATGCTATAGACGGCTATTTACCAAGTCTAGACAATTTACAAGATATTTTAACAAAGGCTAAAAATTGGACTAAAAACGTCGAGGATATACAAGCTAAGGAAAATTTTCCCTACTATGATACTCTCGACGATTTAGTACGCAGAGGAAGAAACATACCTCTTCATTTAGATCCGTTACCTATTCTCGAGTCAACGTTATCCCAGGCGAAAGTATGGAAGGAAAGAACGGCGCGAACGTTTTTGAGGAAGAATTCTCACTACACATTAATGGAGGCTCTTTCTCCGCGGATTGGTGTCGGCGTTCAGGCAATGAAAACTAAGAGAAATAAAGGGGATGAGACCATCGGGGCTGTGTTTGTCTGCGATACTAAATTGGACGATACTAACGACTCAGCTAACGTTGTTGCCGCCTTTAAACTCGCCGAACAACGCGAAATGGAAGCGATGAGAAATCTTAGAGAGAGGAATTTGACCAAGACTGAGATAGACGATTCGAGATATTGCGTCTGCCGGAGACCACGATTCGGACTCATGCTACAGTGCGAATTATGCAAGGATTGGTTCCACTcaAACTGCGTGCCTTTACCAAAAACTACGTACAAAGGGAAGCTCCCCATGTCTCGAGAGACTAAATTCTTATGTCCCTGTTGTCTAAGGTCCCGCAGACCACGGCTAGAAACTATTTTAGCACTTTTAGTAAGTTTACAGAAAATTCCTGTCCGGTTACCCGAAGGCGAAGCTCTCCAGTGTCTCACAGAACGAGCTATGAACTGGCAGGATCGTGCCAGGCAGGCTTTAGCTACCGACGAATTGTCCTCGGCGCTAGCCAAGCTCTCGGTTTTGTCTCAGAAATTGGTTGAAGCAGCAGCGAGggaaaaaacagagaaaataataagcaGCGAGTTGAAAAAGGCCGCGAATAACCCAGAGCTGCACCAGAGAGTTCAAGCCATCGCTCCGCTCAGCGGCGTACATTCCGACGACAGCGTACCGAGCACTGCTgatGACGACGAGGAGGTTGTAACAATCGAGGACGACGAGCCTACTTGTAGTACGTTTAATAGTAACGAACACGATTATTCGTACGtttcaaaGTTTCAACCCAACAAACTCCAGGCCCAGGATCCTGACGCGGCTGTTGTATTGTCAGAGAGCGCTCGAAGCCGATTAGAAGAATTGATGATGGAAGGTGACCTGCTGGAAGTGGCTCTGGACGAGACGCAACACATATGGAAGATACTCAGCCACACTAACATACCTAGCAGCGTTCAAAAATACGCAACGTTCGAGGAAGTGCAAGCTACTTTTAAGCACGATATGAAAGATGTTAAAAAACGGGGTAGAAAACGTAAGTCTGAGGAATTTGAATTGCTGAAAAAACTCGGAAGGCAAAAAGTCGAGGATAAGAATATCGTGAAACGCAAAGGACTTAACAAGGAGAAGAAGATATTCGTAGCCGTTGGACCGATAAAAAGAGGTCCTAGAAagATGAAACGCAAGGAGGGAGAAGAGGGCCCGAAAAAACGGGGTGGTAAcaggaaaaaaactaaacaagaTACTTCGGACGAGGAGGATGACTGCGCGGCAGTTAACTGCCTTCGTCCAAGCGgACGAGAAGTCGACTGGGTCCAGTGTGACGGTGGATGCGATGGATGGTTCCACATGCATTGCGTCGGTTTGGACCGAGCCGAAATCGCGGAAGAGGACGATTATATATGCAGTAATTGCAAAGATGGGGAACAAAATATCACgTTGGCAGGGCCAGATCCCAACGATGAATCATTAGGGCTGGATGCACTTCTTTCGCTTTCTCAATCTCAGGGATACAACAGTGGAGATACAGAACCGGATATACAAGAAACATCTACGTTCGTCAGGACGTACTAA
Protein Sequence
MVSKVDVNIGSEARFVGTYHGKDMSEKGDTDFEFVIPPEAPVFEPTAEEFLDPLGYISKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTEEGGIEIVTKERRWAKIANRIGYPSGRSVGSILKNHYERILYPFDVFKQGKTLTDIKMEPDSDVNEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFAGTDEKPDLLTDNTSPLKQEDCKDECDSDNEKDKDNSKELKKLQFYGPGPKMAGFNTKDVKKPSKTRGVKLHYDFDPLAKYICHNCGRGDTEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTPLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLQGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILMNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCACHSSQLVCLRHFTDLCDCPPDKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPKGDKIELTELKELLSEAEGKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEDLESKEEVSDIEKLEKCIDFGDSICIELPQLVRLKQRLLQTQWLEEVKSIQEEPKSASHEDLAKLLEKGMTIPPHISIENTLSKLKNLMLKIEKWEEKAKTYLQNKNRQTIVTIEEFFKESDAIDGYLPSLDNLQDILTKAKNWTKNVEDIQAKENFPYYDTLDDLVRRGRNIPLHLDPLPILESTLSQAKVWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKRNKGDETIGAVFVCDTKLDDTNDSANVVAAFKLAEQREMEAMRNLRERNLTKTEIDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTTYKGKLPMSRETKFLCPCCLRSRRPRLETILALLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALATDELSSALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSVPSTADDDEEVVTIEDDEPTCSTFNSNEHDYSYVSKFQPNKLQAQDPDAAVVLSESARSRLEELMMEGDLLEVALDETQHIWKILSHTNIPSSVQKYATFEEVQATFKHDMKDVKKRGRKRKSEEFELLKKLGRQKVEDKNIVKRKGLNKEKKIFVAVGPIKRGPRKMKRKEGEEGPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRAEIAEEDDYICSNCKDGEQNITLAGPDPNDESLGLDALLSLSQSQGYNSGDTEPDIQETSTFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_01199923;
80% Identity
-