Basic Information

Gene Symbol
KDM5A
Assembly
GCA_963978495.1
Location
OZ021697.1:1475388-1486890[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.9e-24 9.7e-21 74.4 0.0 2 89 107 190 106 190 0.94
2 2 5.1 1.3e+04 -2.9 0.1 49 81 815 845 812 849 0.64

Sequence Information

Coding Sequence
ATGGTCTCTAAGGTGGATGTAAATATCGGGTGCGAGGCTCGTTTTGGTACTTATCACGGTAAAGATATGAGTGAAAAAGCTGACACGGATTTCGAGTTCGCAATACCACCGGAGGCACCAGTATTTGAGCCAACAGCCGAGGAATTCCTCGACCCCCTTGGCTATATCTCCAAGATTCGTCCGATCGCCGAAAAATCAGGGATTTGCAAAATAAAACCACCACCAaattgGCAACCACCTTTTGCTGTGGATGTTGACAAATTTAAATTCGTACCAAGAATTCAGAGACTCAATGAACTTGAAGCCAAAACCcggataaaattgaatttcttagACCAAATAGCCAAGTTTTGGGAGCTTCAAGGATCTTCGTTAAAAATTCCACTGGTCGAAAGAAAAGCTCTAGACCTATATTCTCTTCACAGAATCGTCACTGAGGAAGGTGGCATCGAAATCGTAACTAAAGAACGAAGATGGGCAAAGATCGCGAACAGGATAGGATATCCATCAGGAAGAAGCGTTGGGAGCATTCTGAAAACTCACTACgaaagaattttatatccATTTGACGTTTTTAAACAAGGAAAGACATTGACCGATATTAAAATAGAACCAGAAACAGacgtaaatgaaaaaaaggaccGGGATTACAAACCGCACGGTATAATATCGCGTCAGCAAATAAAACCGccaaacgaaaaattttcacgacgTTCAAAGCGGTTTACTGGAACGGATGAAAAGCCGGATGTCCTTACAGACTGCACGTCACCCGTCAAGCAAGAGGATTGCAAGGATGAGTGCGACTCCGACAATGAAAAGGATAAGGATAACAGTAAAGAGCTTAAAAAGCTACAGTTTTATGGACCTGGACCAAAAATGGCCGGCTTCAATACCAAAGAAGTTAAAAAACCAAGCAAAACTAGAGGCGTCAAGTTACACTACGATTTTGACCCACTGGCGAAATACATATGTCACAATTGCGGAAGAGGCGACACAGAAGAGAGCATGCTTCTGTGTGACGGATGCGACGACAGCTATCACACATTTTGTCTCATGCCTCCGCTAACAGAAATACCCAAAGGAGATTGGAGGTGTCCAAAATGCGTTGCTGAAGAAGTATCGAAACCTATGGAAGCTTTCGGATTTGAACAGGCTCAGCGAGAGTACACGCTCCAACAATTCGGGGAAATGGCTGATCAGTTCAAAAGCGATTACTTCAACATGCCAGTACACATGGTGCCAACTCCATTGGTCGAGAAAGAATTCTGGCGTATCGTATCCTCCATAGACGAAGACGTGACCGTTGAATACGGAGCTGACCTGCACACCATGGATCATGGTTCAGGTTTTCCTACGAAAACTAGCGTTAATTTATTCACCTGCGATCAGGAGTACGCCGAATCTTCATGGAACCTGAATAATTTACCGGTCTTGCAAGGCAGCGTTTTGGGTCACATAAACGCGGATATTAGCGGCATGAAAGTGCCGTGGATGTACGTAGGGATGTGCTTCGCAACCTTTTGCTGGCACAACGAAGACCACTGGAGCTATTCCATTAATTATTTACACTGGGGAGAACCCAAAACTTGGTATGGTGTTCCTGGAACCCAAGCGGAGAGGTTCGAACATTCCATGAAATCTGCCGCCCCAGAGCTATTCCACAGCCAGCCGGACCTCCTCCATCAACTCGTAACGATCATGAACCCGAACATACTCATGAACGAAGGAGTTCCAGTGTTCAGAACTGATCAACACGCTGGTGAATTTGTTGTGACATTTCCCAGGGCTTACCATGCCGGATTTAATCAAGGGTACAATTTTGCCGAGGCCGTTAATTTCGCACCGGCCGATTGGCTAAAAATGGGCCGCGAATGTATTTCACATTATTCCAATCTTCGACGTTTCTGCGTTTTCTCTCACGACGAACTGGTTTGCAAAATGTCGCTTGATCCCGATTCTCTTGACATCGGTATTGCAACGGCTACGTATCACGATATGCTGCAAATGGTCgacgacgagaaaaaattacgGAAAAATCTCCTTGAATGGGGTGTAACGGAGGCAGAAAGGGAAGCATTCGAGTTATTGCCAGATGACGAGAGACAGTGCGAGGCATGTAAAACAACTTGTTTCCTGAGTGCAGTGACGTGCGCATGCCACAATTCACAACTAGTTTGTCTGAGGCATTTTACTGACCTCTGCGATTGCTCGCCGGACAAGCACACTCTCAGATATCGTTATACCCTCGATGAGTTGCCAATAATGTTGCAAAAACTTAAACTCAAAGCAGAGTCTTTTGACTCCTGGGTAACAAAAGTGAAAGAGGCGATGGACCCGAAAGGGGACAAAATCGAGCTCACGGAACTCAAAGAGTTACTCAGTGAGGCTGAGGTAAAAAAGTTCCCAGAGAGTGAGTTACTCACCGCTCTTACTACTGCGGTTCAAGATGCAGAGAAATGCGCGAGCGTTGCTCAGCAGCTACTGAACAACAAGCAGCGAACAAGGACCCGGCAATCTgttgatacaaaatataaactTACAGTCGAAGAATTAACACTGTTTTATAAAGAGATAACAAATCTTTGTTGCGAACTAAAGGAATCCGATGGTGTTAAATACATACTCGATCAAGTTGTTCAGTTTCAAAAAGATGCTGAAGAACTCGAATCGAAGGATGAGGTTTCTGATgttcaaaaacttgaaaaatgcATAGATTTCGGCGATTCTATTTGTATCGAGTTGCCTCAGCTGGTCAGGCTCAAACAGagaTTACTACAGACGCAATGGTTGGAAGAAGTGAAGTCTATTCAAGAGGAGTCGAATTCGGCTAGTCACGAAGACTTGGCGAAGCTTGTAGAAAAAGGAATGTCGATTCCTCCGCATATCAGTATAGAAAACACGCtctcaaaattacaaaacttgATGACTAATATAGAAAAATGGGAAGACAAGGCCAAGAATTATCTACAGAATAAAAATCGTCAGACGATTGGAACGATAGAGGATTTCTTAAAGGAAGCCGATGCTATCGACGCCTATTTACCAAGTCTGGATACGTTACAAGACATTTTAACTAAGGCTAAGAACTGGACCAAAACCGTTGAGGGCATACAGGCAAAGGAAAACTTTCCCTACTACGACACCCTCGACGACTTGGTGCGCAGGGGGCGAAATATTCCTCTCCATTTGGACGCGCTGCCTATTCTCGAGTCGACGTTGTCCCAAGCGAAAGTTTGGAAGGAAAGAACAGCAAGGACTTTTCTGAGGAAGAATTCTCACTATAGTTTAATGGAAGCTCTCTCTCCGAGAATCGGAGTTGGCGTTCAGGCGatgaaaactaaaagaaataAGGGGGAGGAACCGGTTGGGGCTGTATTCGTCTGCGACACAAAATTGGATGACACAAACGATTCGGCGAACGTAGTCGCAGCTTTCAAGCTCGCGGAACAGCGAGAAATGGAAGCGATGAGGAATCTTAGAGAGAGGAATTTGACCAAGACTGAGATGGACGATTCGAGATACTGTGTGTGTCGGAGACCTCGTTTCGGACTAATGCTACAGTGCGAGTTGTGCAAGGATTGGTTTCAttCAAACTGCGTGCCTTTACCAAAAACCACGTACAAAGGAAAGCTGCCCGTGTCGCGCGAGACGAAGTTCCTCTGCCCCTGTTGTCTGAGGTCACGCAGACCGAGGCTCGAAACAATATTGGCCCTGTTGGTTAGTTTGCAGAAAATATCCGTGCGGCTGCCCGAAGGCGAAGCACTCCAATGTCTCACTGAACGAGCGATGAACTGGCAGGATCGCGCAAGGCAAGCCCTCGCAACAGATGAGCTTTCCTCAGCGTTGGCGGAGCTTTCGGTCTTGTCTCAAAAGCTTGTTGAAGCCGCGGCGAGggagaaaactgaaaaaataatcagcaGCGAGTTGAAAAAGGCTGCCAACAATCCCGAACTGCACCAGCGAGTACAGGCCATCGCTCCACTTAGCGGGGTACATTCCGACGACAGCGTACCTAGCACCGCTgatgacgacgacgacgttgttACCATCGAGGATGACGAGCCTACTTGTAGTACGTTTAATAGTAACGAACACGATTATTCGTACGtttcaaagtttcaacCGAGTAAACTTCAGTCACAGGATGCCGATGCTGCTGTCGTTTTGTCAGAAACGGCACGAGGTCGGTTAGAGGAGTTAATGATGGAAGGCGACCTTCTCGAAGTCGCTTTAGACGAAACGCAAGACATATGGAAAATCCTAAGTCATACAAATATCCCTAGTAGCGTTCAAAAGTACGCACCTTTCGAAGAAGTTCAAGCTTCCTTCAAACACGACATAAAAGACGTGAAAAAACGGGGGAGGAAACGTAAGTCCGAGGAATTTGAGCTCCTCAAAAAACTCGGCAGGCAAAAagtagacgaaaaaaatatcatgaagCGCAAAGGCCTCGTcaaggagaagaaaattgtTGTAGCTGCCGCGGCGGCTGTCGGGCCGATTAAACGGGGCCCCAGAAAGATGAAGCGTAAGGAGGGAGAAGAGGGGCCCAAAAAACGCGGAGGtaataggaaaaaaacgaaacaagacACATCGGACGAAGAAGATGATTGCGCGGCGGTCAACTGTCTCCGTCCAAGTGGACGAGAAGTTGACTGGGTTCAATGCGACGGAGGTTGCGACGGTTGGTTCCACATGCACTGTGTTGGCCTGGACCGAGCCGAGATCGCTGAGGAGGACGATTACATATGCAGTAATTGCAAAGACGGCGAACAGAATGTCACGTTGGCAGATCCGGTCGATGAATCATTAGGCCTGGATGCACTTCTTTCGCTTTCACAGTCTCAGGGATACAACAGTGGCGATACAGAACCGGAGATTCAAGAAGCTTCTTCGTTCGTCAGGACCTACTAA
Protein Sequence
MVSKVDVNIGCEARFGTYHGKDMSEKADTDFEFAIPPEAPVFEPTAEEFLDPLGYISKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTEEGGIEIVTKERRWAKIANRIGYPSGRSVGSILKTHYERILYPFDVFKQGKTLTDIKIEPETDVNEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFTGTDEKPDVLTDCTSPVKQEDCKDECDSDNEKDKDNSKELKKLQFYGPGPKMAGFNTKEVKKPSKTRGVKLHYDFDPLAKYICHNCGRGDTEESMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTPLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLQGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGTQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILMNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCACHNSQLVCLRHFTDLCDCSPDKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPKGDKIELTELKELLSEAEVKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEELESKDEVSDVQKLEKCIDFGDSICIELPQLVRLKQRLLQTQWLEEVKSIQEESNSASHEDLAKLVEKGMSIPPHISIENTLSKLQNLMTNIEKWEDKAKNYLQNKNRQTIGTIEDFLKEADAIDAYLPSLDTLQDILTKAKNWTKTVEGIQAKENFPYYDTLDDLVRRGRNIPLHLDALPILESTLSQAKVWKERTARTFLRKNSHYSLMEALSPRIGVGVQAMKTKRNKGEEPVGAVFVCDTKLDDTNDSANVVAAFKLAEQREMEAMRNLRERNLTKTEMDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTTYKGKLPVSRETKFLCPCCLRSRRPRLETILALLVSLQKISVRLPEGEALQCLTERAMNWQDRARQALATDELSSALAELSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSVPSTADDDDDVVTIEDDEPTCSTFNSNEHDYSYVSKFQPSKLQSQDADAAVVLSETARGRLEELMMEGDLLEVALDETQDIWKILSHTNIPSSVQKYAPFEEVQASFKHDIKDVKKRGRKRKSEEFELLKKLGRQKVDEKNIMKRKGLVKEKKIVVAAAAAVGPIKRGPRKMKRKEGEEGPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRAEIAEEDDYICSNCKDGEQNVTLADPVDESLGLDALLSLSQSQGYNSGDTEPEIQEASSFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_01199923;
80% Identity
-