Basic Information

Gene Symbol
KDM5A
Assembly
GCA_963662125.1
Location
OY759154.1:1195963-1220791[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.4e-25 6.7e-22 77.7 0.0 2 89 168 251 167 251 0.94
2 3 4.8 9.6e+03 -2.9 0.1 49 81 897 927 894 931 0.64
3 3 1.3 2.7e+03 -1.2 0.0 49 65 1108 1124 1100 1138 0.72

Sequence Information

Coding Sequence
ATGGTCTCGAAGCTCGATGTAAATATCACCACCGAGGCTGCCGCTTGTGCTACGAGGCAAAACAATCCGACGACCcgacaacaaaataatcaacgatCACAACAAACCCAACGACAATTGTCGCTGatgcaacagcaacagcaacaacaacaacaacaacaacaacaacaaaataatacacGCGGACAAACGGAGGATATTGTGATTTTGGACGATCGCGTTGATAACGCGACCAACACGAGACAAGTAATGGTCGACAAAACGGATACGGATTTCGAGTTTGGCATACCACCGGAGGCCCCGGTTTTCGAACCCACCGCCGATGAGTTTCTCGATCCTCTCGGTTACATCGCCAAGATACGTCCGATTGCCGAAAAATCCGGTATATGCAAAATCAAACCGCCAccgAATTGGCAGCCACCATTTGCCGTGGACGTtgacaaattcaaattcgtcCCGAGAATACAGAGGCTAAACGAGCTCGAGGCAAAGACGCGAattaaactcaattttttagatcAAATTGCGAAGTTTTGGGAGCTTCAAGGATCGTCTTTGAAGATACCATTGGTCGAGCGCAAAGCTTTGGATCTTTACTCGCTTCATCGAATCGTCACCGATGAAGGAGGCATCGATCACGTGACCCGAGAACGCAGATGGGCAAAAATCGCAAACAAATTGGGTTATCCGTCGGGTCGTAGCGTCGGcagtattttgaaaaatcattacgaaagaattttgtatcCCTTCGATGTGTTCAAGCAGGGAAAGACTCTCGGACCGTTGGGAGAAATTAAAATGGAATCGGAGCCCGAACAAACGGAGAAGAAAGATCGCGACTACAAACCGCACGGAATAATTTCGCGTCAACAAATAAAACCGCCACCGGCAAAATTTTCGCGTCGTTCGAAGCGTTtcgcgaacgacgaaaaatctcaAGACGCCACAAACGCGGGCACGATAAAGCAGGATTGTTGCAAGGACGATTGCGATTCTGACAACGATTGCAAAaccgaaataaaacaaaacaaacaacaattcGCGAAATTCGATCCGGACGACAAGGACAACAGCAAGGAACTTcgtaaattacaattttacggTCCGGGACCGAAAATGGCGGGTTTCAATACCAAAGAAGGTGGCGGTGGAAAAAAAGCTGCGAAGACACGTGGTGTGAAACTAACGTACGAGTTCGATCCTCTGGCCAAATACATCTGTCACAATTGCGGTCGCGGTGACATGGAGGAAAGCATGTTGCTATGCGACGGTTGCGACGACAGTTATCACACGTTTTGTCTTTTGCCACCGCTCACGGAAATTCCTAAAGGCGATTGGCGTTGTCCAAAATGCGTGGCCGAGGAGGTGTCCAAACCCATGGAGGCCTTCGGTTTCGAACAGGCCCAGCGCGAGTACACGCTTCAACAATTCGGCGAAATGGCCGATCAGTTCAAAAGCGATTATTTCAACATGCCCGTGCACATGGTACCCACGACTTTggtggaaaaagaattttggcGAATCGTCTCGTCCATCGACGAAGACGTTACCGTTGAATACGGCGCCGATCTACACACCATGGATCACGGTTCGGGTTTTCCCACGAAAACCAGCGTTAATCTGTTCACTTGCGATCAGGAATACGCCGAATCAGCGtggaatttgaataatttgccGGTATTGGAAGGAAGCGTTCTAGGACACATTAATGCCGATATCAGTGGCATGAAGGTACCGTGGATGTACGTTGGCATGTGTTTCGCAACTTTTTGCTGGCACAACGAGGATCATTGGAGCTATTCCATCAATTATCTTCATTGGGGCGAACCGAAAACTTGGTACGGCGTGCCCGGTTCCGAAgccgaaaaatttgaacattCGATGAAATCCGCCGCACCCGAATTGTTTCACAGCCAACCGGATTTGTTGCATCAACTTGTCACCATTATGAATCCTACTATACTCACCAATGAAGGTGTTCCGGTGTTCAGAACGGATCAACACGCCGGTGAATTCGTGGTTACATTTCCACGGGCTTATCACGCGGGTTTCAATCAAGGTTACAATTTCGCCGAAGCCGTGAACTTCGCACCAGCCGATTGGCTCAAAGTCGGACGTGATTGCATCTCGCACTACTCGAATCTCCGACGTTTTTGTGTATTCTCGCACGACGAGCTCGTTTGCAAGATGTCGTTGGATCCGGATTCTCTCGACATTGGAATCGCGACCGCGACCTATCAGGACATGTTGCAGATGgtcgacgacgagaaaaaactTCGAAAGAATCTGCTAGAGTGGGGCGTAACGGAAGCCGAGAGAGAAGCTTTCGAGCTCCTCCCCGACGATGAGAGACAATGCGAAGCTTGTAAAACGACGTGTTTTCTGAGCGCCGTTACCTGTTCGTGTCACAGTTCGCAATTGGTCTGTCTGAGACATTTCAAAGATCTTTGCGGCTGTACGCCGGAAAAGCACACTCTGCGATACAGATACACCCTAGACGAGCTTCCGATTAtgttgcaaaaattgaaactcaAAGCGGAATCGTTCGACTCTTGGGTGTCCAAGGTCAAGGAGGCCATGGATCCCAAAGGCGAGAAGATAGAACTCACTgaactaaaaaatttgttgaacgaGGCTGAGAGCAAAAAATTTCCGGACAGCGAACTTTTGACCGCTCTCACGACGGCGGTGCAAGACGCCGAGAAGTGCGCCAGCGTGGCGCAACAACTGTTGAACAACAAGCAACGCACAAGGACACGACAATCCGTCGACACAAAGTACAAATTAACGGTCGAAGAATTGACTCTGTTCTACAaggagataaaaaatttgtgttgCGAATTGAAAGAATCGGACGGTGTGAAATACATTCTCGATCAGGTTGTGCAATTTCAAAAAGACGCCGAAGATTTGGAAACGACGATCGGTGACGATTGCGAcgtggaaaaattggaaaaatgcaTAGATTTCGGTGATTCCATATGCATAGAATTGCCACAATTGTCgcgtttgaaacaaaaattgagtcAGATACAATGGTTGGACGAGGTTAAATCGATGCAGGAAGATTCGAAATCGATAACCCGCGACGAAGTCGCTCGTTTGGCCGAAAAAGGAATGACAATACCCCCGCATTTTACCGTGGAAAATATGATATCCAAATTGCAACAATTGATGATAACCATTGACGCGTGGGAGGAAAAAGCGAAGATACATTTGAAcgcgaaaaatcgtcaaaacaTATCTGTGATCGAAGAATTTGTACAGGAAGCCGACGACATCGACGCTTATCTCCCGAGTTTGGATGGGCTTCGGGATCTCTTGACCAAAGCGAAAAATTGGAGCAAAATCGTCGAGGAAATTCAGGCCCGCGATAATTACACGTATTACGACACGCAGGACGAATTGTTGCGCAAAGGCAGAAACATTCCTTTTCATCTTGATAATCTGCCCATACTCGAATCCAATTTGTCACAGGCTAAAGCGTGGAAGGACAGAACGGCGAGAACATTTTTGCGAAAGAATTCTCATTACACGCTGATGGAAGCATTGTCACCGAGAATCGGCGTCGGTGTTCAGGCCCTcaaaacgaagaagaacaaGGGCGACGAGAGCGTGGGGGCGGTTTTCGTTTGCGACACGAAACTCGAAGATTCTAGCAGTTCGGCCGAGGTCGTGGCCGCGTTCAAACTCGCCGAACAGCGCGAGATGGAAGCCATGGGAAATCTCAGAGAGAGAAACGTCACGAAAATGGAACACGACGATTCGAGGTACTGCGTTTGTCGAAGACCCAGGTTCGGGCTCATGCTTCAGTGCGAATTGTGCAAGGATTGGTTTCACTCAAATTGCGTTCCACTGCCAAAGACGATGTACAAAGGCAAAGTACCGTCGAGTCGTGAGACAAAATTTTTGTGCCCCTGCTGTTTGAGATCGAGAAGGCCCAGGCTCGAAACGATTCTCGCTCTGCTCGTTAGTTTGCAAAAAATTCCCGTGAGATTGCCGGAGGGCGAGGCGCTTCAGTGTTTGACCGAACGCGCGATGAATTGGCAAGATCGTGCGAGACAAGCGCTCGCAAACGACGAGATAAACACGGTACTCGCTAAATTGTCGGTTTTGTCGCAAAAACTCGTCGAAGCGGCGGCACgtgaaaaaacggaaaaaataataaccagCGAATTGAAAAAAGCTGCGAACAATCCGGAACTTCATCAACGGGTTCAGGCGATCGCTCCTCTCAGCGGAGTACACTCGGACGACAGCGTTCTCAGCACGGCTgacgacgatgacgacgttGTCACCATCGACGGGGACGAACCCACCTGCAGCACCTTCAACAACAGCGAACACGCCTACTCTTATGTATCGAAATTCCAACGAAAATCGCAATCTCAAAACCCGGAGACTTCCGCAGTACTTTCGGACGGTGCGAGAAAGCGATTGGACGAGCTAATGATGGAGGGCGATTTGCTGGAGGTCGCGTTGGACGAGACCCAACACATATGGCGAATTTTAAGTCACACGAGCAGTCCGAGCAGTCCGAAGAAGTACGCCGCTTTCGAGGAGGTACAGGCCAATCTCAATTCGGACATGAAAGACGCGAAGAAACGCGGACGCAAACGTAAATCCGAGGAATTCGAATTGTCGAAGAAACTCGTTAAACCGAAGATCGAGGACAAAAATGTGGTTAAGCGCAAGGGTTTCGTGGCCAAGGAGAAAAAAGTCGTGACCGCGCCACCCGCGACTCCACCGGGACCGTTGAAACGCGGTCCGCGAAAgATGAAACGAAAGGAAGGCGACGAACCGCCGAAAAAACGCGGTGGTAATCGTAAAAAGACAAAACAGGACACGTCCGACGAGGAAGACGACTGCGCGGCCGTCAATTGTCTACGTCCCAGCGGTCGCGAGGTCGATTGGGTGCAGTGCGACGGGGGTTGCGACGGTTGGTTCCACATGCACTGCGTCGGTTTGGACAGAACCGAGATTGCCGAGGAGGACGATTACATATGCAGCAATTGCAAAGATTCCGACCAAAATGCAACGTCGCGAGATACGGATCCCCTCGCTGAATCATTAGGCCTGGATGCACTTCTTTCCCTTTCACAGTCCCAGGGATACCACAGCGGGGACACGGATCCGGACATACAGGAGGTATCGTCGTTCGTCAGGACTTACTGA
Protein Sequence
MVSKLDVNITTEAAACATRQNNPTTRQQNNQRSQQTQRQLSLMQQQQQQQQQQQQQQNNTRGQTEDIVILDDRVDNATNTRQVMVDKTDTDFEFGIPPEAPVFEPTADEFLDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTDEGGIDHVTRERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLGPLGEIKMESEPEQTEKKDRDYKPHGIISRQQIKPPPAKFSRRSKRFANDEKSQDATNAGTIKQDCCKDDCDSDNDCKTEIKQNKQQFAKFDPDDKDNSKELRKLQFYGPGPKMAGFNTKEGGGGKKAAKTRGVKLTYEFDPLAKYICHNCGRGDMEESMLLCDGCDDSYHTFCLLPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTTLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESAWNLNNLPVLEGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSEAEKFEHSMKSAAPELFHSQPDLLHQLVTIMNPTILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKVGRDCISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYQDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCHSSQLVCLRHFKDLCGCTPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVSKVKEAMDPKGEKIELTELKNLLNEAESKKFPDSELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEIKNLCCELKESDGVKYILDQVVQFQKDAEDLETTIGDDCDVEKLEKCIDFGDSICIELPQLSRLKQKLSQIQWLDEVKSMQEDSKSITRDEVARLAEKGMTIPPHFTVENMISKLQQLMITIDAWEEKAKIHLNAKNRQNISVIEEFVQEADDIDAYLPSLDGLRDLLTKAKNWSKIVEEIQARDNYTYYDTQDELLRKGRNIPFHLDNLPILESNLSQAKAWKDRTARTFLRKNSHYTLMEALSPRIGVGVQALKTKKNKGDESVGAVFVCDTKLEDSSSSAEVVAAFKLAEQREMEAMGNLRERNVTKMEHDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTMYKGKVPSSRETKFLCPCCLRSRRPRLETILALLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALANDEINTVLAKLSVLSQKLVEAAAREKTEKIITSELKKAANNPELHQRVQAIAPLSGVHSDDSVLSTADDDDDVVTIDGDEPTCSTFNNSEHAYSYVSKFQRKSQSQNPETSAVLSDGARKRLDELMMEGDLLEVALDETQHIWRILSHTSSPSSPKKYAAFEEVQANLNSDMKDAKKRGRKRKSEEFELSKKLVKPKIEDKNVVKRKGFVAKEKKVVTAPPATPPGPLKRGPRKMKRKEGDEPPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRTEIAEEDDYICSNCKDSDQNATSRDTDPLAESLGLDALLSLSQSQGYHSGDTDPDIQEVSSFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
-
80% Identity
-