Npin022911.1
Basic Information
- Insect
- Neodiprion pinetum
- Gene Symbol
- KDM5A
- Assembly
- GCA_021155775.2
- Location
- CM037744.1:34955093-34967929[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.2e-25 2.3e-21 76.8 0.0 2 89 107 190 106 190 0.94 2 2 4.5 1.7e+04 -2.8 0.1 49 81 815 845 812 849 0.64
Sequence Information
- Coding Sequence
- ATGGTCTCTAAGGTGGATGTAAATATCGGGTGCGAGGCTCGGTTTGGTACTTATCACGCTAAAGATATGAGTGAAAAAGGTGACAAGGATTTTGAGTTCGCTATACCACCAGAGGCCCCAGTCTTTGAGCCAACAGCGGAGGAATTCCTCGACCCCCTTGGCTACATCTCCAAGATTCGTCCGATTGCCGAAAAATCGggaatttgcaaaataaaacCACCGCCAaaTTGGCAACCACCTTTTGCCGTTGACGTtgacaaattcaaatttgtacCAAGAATTCAGAGGTTAAACGAACTTGAAGCAAAGACCAGAATAAAGCTGAATTTTTTAGATCAAATAGCCAAATTTTGGGAGCTTCAAGGATCATCGTTGAAAATTCCACTGGTTGAACGTAAAGCTTTAGACTTGTACTCCTTACACAGAATTGTCACCGAGGAAGGTGGCATTGAAACAGTTACTAAAGAAAGAAGATGGGCAAAGATTGCAAACAGGATAGGATATCCATCCGGTCGAAGCGTTGGAAGTATTTTAAAAAACCACTATGAAAGAATTTTGTATCCCTTTGATGTTTTCAAGCAAGGGAAAACCTTGACTGACATTaaaattgagCCAGAGGGTgacgtgaatgaaaaaaaggacAGGGATTATAAGCCTCATGGAATAATATCGAGACAGCAAATAAAACCaccaaatgaaaaattttcacggcGTTCCAAGCGATTTGCTGGTACGGATGAAAAACCAGAATTAGTCACAGACAGCACATCACCTATTAAGCAAGAAGATTGCAAAGATGAGTGCGATTCTGACAGTGAAAAGGATAAAGATAACAGCAAAGAGCTTAAAAAATTGCAGTTTTACGGACCTGGTCCGAAAATGGCCGGTTTTAATACCAAAGATGTAAAAAAACCTAGCAAAACCAGAGGCGTCAAATTACACTATGATTTTGACCCGcttgcCAAATACATTTGCCACAACTGTGGTAGAGGCGATACAGAGGAGAGCATGCTGTTGTGCGACGGATGCGACGACAGCTATCACACCTTCTGCCTTATGCCACCATTAACCGAAATACCAAAGGGTGATTGGCGATGTCCAAAATGCGTCGCCGAAGAAGTCTCAAAGCCTATGGAAGCCTTTGGATTTGAACAAGCTCAGCGTGAATATACGCTGCAACAATTTGGCGAAATGGCCGATCAGTTCAAAAGCGATTACTTCAACATGCCTGTACACatggTACCGACTCCTTTGGTCGAAAAGGAATTCTGGCGGATTGTTTCTTCGATAGATGAAGATGTGACCGTCGAGTATGGGGCTGATTTGCACACAATGGATCATGGCTCCGGTTTCCCGACGAAGACCAGTGTCAATTTGTTCACGTGCGATCAGGAGTACGCCGAATCTTCGtggaatttgaataatttaccCGTTCTACATGGAAGCGTGCTGGGACACATCAATGCAGACATTAGCGGGATGAAAGTTCCCTGGATGTACGTTGGCATGTGCTTTGCCACCTTTTGTTGGCACAACGAAGATCATTGGAGTTATTCCATAAACTATCTACACTGGGGAGAGCCCAAGACTTGGTACGGAGTTCCTGGATCTCAGGCGGAAAGATTTGAACATTCCATGAAATCTGCTGCCCCGGAATTATTCCACAGCCAACCGGACCTTCTCCACCAACTCGTCActattatgaaccctaacatACTGATGAATGAAGGAGTTCCAGTATTCAGAACGGATCAGCACGCAGGTGAATTTGTTGTTACGTTTCCAAGAGCCTATCACGCCGGCTTCAACCAAGGGTACAACTTTGCAGAGGCTGTCAATTTTGCTCCAGCTGATTGGTTGAAAATGGGACGGGAATGTATTTCACATTACTCTAACTTGAGACGCTTCTGCGTTTTCTCACATGACGAACTTGTCTGCAAAATGTCTCTGGACCCAGACTCCTTGGACATCGGTATAGCCACAGCAACATATCACGACATGCTTCAGATGGtcgacgatgaaaaaaaattgcgaaaaaatctTTTGGAATGGGGCGTAACAGAAGCAGAGCGCGAAGCTTTTGAACTTTTACCGGACGATGAGAGGCAATGCGAGGCATGTAAAACTACCTGTTTCTTAAGTGCGGTAACGTGCGCCTGCCATAACTCGCAGCTCGTTTGTTTGAGGCATTTTACCGACCTCTGCGACTGCCCGCCGGAAAAACATACTCTCAGATATCGTTACACGCTCGATGAGTTGCCCATAATGTTGCAAAAGCTTAAACTGAAAGCGGAGTCGTTCGACTCATGGGTCACCAAAGTGAAGGAAGCAATGGACCCGAAAGGAGACAAAATCGAACTTACGGAACTCAAAGAATTGCTCAACGAAGCTGAAGTCAAGAAGTTTCCAGAAAGCGAATTACTTACCGCTCTTACTACCGCTGTACAAGATGCTGAAAAATGCGCCAGCGTTGCTCAGCAGCTGTTGAACAACAAGCAGCGAACAAGGACTAGGCAGTCTGTAGACACAAAATATAAACTAACTGTCGAAGAGTTGACCTTGTTTTacaaagaaataacaaatctCTGCTGCGAATTGAAAGAATCTGATGGTGTTAAATACATATTAGACCAAGTAGTTCAATTTCAAAAGGATGCCGAGGAATTGGAAAGTAAAGATGAAATTACGGACATCGAGAAGCTGGAGAAATGCATTGACTTCGGTGATTCTATTTGCATTGAATTACCACAGCTTGTTAGACTAAAACAGAGATTGGTGCAGACGCAGTGGCTGGAAGAAGTGAAATCTATTCAGGACGAACCAAAATCAGCCAGTCACGAGGATCTTGTAAAGCTGGTAGAAAAAGGGATGACAATCCCGCCACACGTTAGCATAGAAAACACGTTATCAAAGCTCCAGAATTTAATGATAGGTATAGAAAAGTGGGAAGATAAGGCGAAAGGGTATctgcaaaataaaaatcgtcaGACCATCGCTACGATAGAAGATTTCTTGAAAGAAGCCGACGAAATCGACGCCTATCTACCAAACCTAGACAATTTACAAGACATTTTAACAAAGGCCAAAAACTGGACTCAAAACGTTCAGGATATTCAAGCCAAGGAGAATTATCCTTACTACGACACACTTGACGAACTTGTACGTAGGGGTAGAAACATACCGCTTCATTTAGACGCTCTGCCGATCCTAGAGTCGACGTTGTCTCAAGCTAAAGTTTGGAAAGAAAGAACAGCTCGAACATTTCTCAGAAAGAATTCTCACTATACCTTAATGGAAGCTCTCTCTCCAAGAATCGGAGTAGGTGTGCAAGCTATGAAGACGAAGAGAAACAAGGGAGAGGAGACGGTCGGCGCCGTGTTTGTGTGTGATACAAAATTGGACGATACTAATGACTCCGCGAATGTTGTCGCGGCGTTCAAACTCGCCGAGCAGCGTGAAATGGAAGCCATGAGGAATCTTAGAGAGAGGAATTTGACCAAGACTGAGATGGACGAATCGAGATATTGCGTCTGCCGAAGACCCCGATTTGGACTGATGCTACAGTGCGAACTTTGCAAGGATTGGTTTCACTCAAACTGTGTGCCTTTACCCAAAACCACGTACAAAGGGAAGCTACCGGTGTCGCGAGACACAAAGTTCTTGTGCCCGTGTTGTCTGAGATCACGCCGACCTCGTCTTGAGACGATATTAGCCCTTTTAGTGagcttacaaaaaattccCGTACGTTTGCCCGAGGGTGAAGCTCTGCAATGCCTCACCGAACGAGCGATGAACTGGCAGGATCGCGCCAGGCAAGCTTTAGCAACTGAAGAATTATCTTCAGCGTTGGCGAAACTGTCGGTGTTATCTCAGAAGCTGGTTGAAGCAGCTGCAAGggaaaaaacagaaaagatAATCAGCAGCGAGTTGAAAAAGGCTGCTAACAACCCGGAGCTCCATCAAAGAGTACAAGCCATCGCCCCACTTAGCGGTGTACATTCCGACGATAGTGTACCGAGTACTGCTgacgatgatgacgacgtTGTTACCATCGAGGATGACGAGCCTACTTGTAGTATGTTTAATAGTAACGAACACGATTATTCGTACGTTTCCAAGTTTCAACCCAACAAACTCCAAGGGCAAGACACTGACGCCGCAGTAGTTTTGTCAGAAAGTGCGAGGGGTCGGCTCGAGGAGTTAATGATGGAGGGCGATCTGCTCGAAGTAGCCTTGGATGAAACACAGCACATATGGAAGATACTGAGCCACACGAACATACCTAGCAGTGTGCAAAAGTATGCGACCTTCGAGGAAGTACAAGCAACGTTTAAGCACGACATGAAAGACGTTAAAAAACGCGGACGTAAACGTAAATCGGAAGAATTCGAGCTGCTGAAAAAGTTGGGCCGGCCAAAAgtcgacgaaaaaaatatcctgAAACGTAAAGGATTGaataaggaaaagaaaattatcatgGCTGTCGGACAGATGAAACGCGGGCCGCGAAAGATGAAACGTAAGGAGGGCGAGGAAGGGCCCAAAAAACGCGGTGGTAACAGGAAGAAAACGAAACAAGACACTTCCGACGAAGAGGACGACTGTGCAGCTGTCAGTTGCCTCCGCCCTAGTGGGCGCGAGGTCGATTGGGTCCAATGCGATGGAGGCTGTGATGGTTGGTTCCATATGCACTGCGTTGGCTTGGACCGTGCAGAAATAGCTGAAGAAGATGATTACATCTGTAGTAATTGCAAAGACAGCGATAATGTCATGGGATACAACAGCGGAGATACGGAACCGGAGATACAGGAAGCCTCACCATTCGTTGAGACGTATTAA
- Protein Sequence
- MVSKVDVNIGCEARFGTYHAKDMSEKGDKDFEFAIPPEAPVFEPTAEEFLDPLGYISKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTEEGGIETVTKERRWAKIANRIGYPSGRSVGSILKNHYERILYPFDVFKQGKTLTDIKIEPEGDVNEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFAGTDEKPELVTDSTSPIKQEDCKDECDSDSEKDKDNSKELKKLQFYGPGPKMAGFNTKDVKKPSKTRGVKLHYDFDPLAKYICHNCGRGDTEESMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTPLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLHGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILMNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCACHNSQLVCLRHFTDLCDCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPKGDKIELTELKELLNEAEVKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEELESKDEITDIEKLEKCIDFGDSICIELPQLVRLKQRLVQTQWLEEVKSIQDEPKSASHEDLVKLVEKGMTIPPHVSIENTLSKLQNLMIGIEKWEDKAKGYLQNKNRQTIATIEDFLKEADEIDAYLPNLDNLQDILTKAKNWTQNVQDIQAKENYPYYDTLDELVRRGRNIPLHLDALPILESTLSQAKVWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKRNKGEETVGAVFVCDTKLDDTNDSANVVAAFKLAEQREMEAMRNLRERNLTKTEMDESRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTTYKGKLPVSRDTKFLCPCCLRSRRPRLETILALLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALATEELSSALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSVPSTADDDDDVVTIEDDEPTCSMFNSNEHDYSYVSKFQPNKLQGQDTDAAVVLSESARGRLEELMMEGDLLEVALDETQHIWKILSHTNIPSSVQKYATFEEVQATFKHDMKDVKKRGRKRKSEEFELLKKLGRPKVDEKNILKRKGLNKEKKIIMAVGQMKRGPRKMKRKEGEEGPKKRGGNRKKTKQDTSDEEDDCAAVSCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRAEIAEEDDYICSNCKDSDNVMGYNSGDTEPEIQEASPFVETY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01103329;
- 90% Identity
- iTF_01199923;
- 80% Identity
- -