Basic Information

Gene Symbol
KDM5A
Assembly
GCA_963932425.1
Location
OZ010628.1:12232612-12243731[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.5e-24 7e-21 74.4 0.0 2 89 107 190 106 190 0.94
2 2 4.5 9.2e+03 -2.8 0.1 49 81 815 845 812 849 0.64

Sequence Information

Coding Sequence
ATGGTCTCTAAGGTGGATGTAAATATCGGGTGCGAGGCTCGTTTTGGTACTTATCACGGTAAAGATATGAGTGAAAAAGCTGACACGGATTTCGAGTTCGCAATACCACCGGAGGCACCAGTATTTGAGCCAACAGCCGAGGAATTTCTCGATCCCCTTGGCTATATCTCCAAGATTCGTCCGATAGCCGAAAAATCAGGGATTTGCAAAATAAAACCACCACCAaattgGCAACCACCTTTTGCCGTGGATGTTGACAAATTTAAATTCGTACCAAGAATTCAGAGACTAAATGAACTCGAAGCTAAAACGaggataaaattgaatttcttagACCAAATAGCCAAGTTTTGGGAGCTTCAAGGATCTTCGTTAAAAATTCCACTGGTCGAAAGAAAAGCTCTAGACCTATATTCTCTTCACAGAATCGTCACTGAGGAAGGTGGCATCGAAATCGTAACTAAAGAACGAAGATGGGCAAAAATTGCGAACAGGATAGGATATCCATCAGGAAGGAGCGTTGGGAGCATTCTGAAAACTCACtatgaaagaattttatatccaTTTGACGTTTTTAAACAAGGAAAGACATTGACCGATATTAAAATAGAACCAGAAACAgacgtgaatgaaaaaaaggaccgAGATTACAAACCGCACGGTATAATATCGCGTCAGCAAATAAAACCGccaaacgaaaaattttcacgacgTTCAAAGCGGTTTACTGGAACGGATGAAAAGCCAGATGTCCTTACAGACTGCACGTCACCCGTCAAGCAAGAGGATTGCAAGGATGAGTGCGACTCCGACAATGAAAAGGATAAGGATAACAGTAAAGAGCTTAAAAAGCTACAGTTTTATGGACCTGGACCAAAAATGGCCGGCTTCAATACCAAAGAAGTTAAAAAACCAAGCAAAACTAGAGGCGTCAAGTTACACTACGATTTTGACCCACTGGCGAAATACATATGTCACAATTGCGGAAGAGGCGACACAGAAGAAAGCATGCTTCTGTGTGACGGATGCGACGACAGCTATCACACATTTTGTCTTATGCCTCCGCTAACAGAAATACCTAAAGGAGATTGGAGGTGTCCTAAATGTGTTGCTGAAGAAGTATCGAAACCTATGGAAGCTTTCGGATTTGAACAGGCTCAGCGAGAGTACACGCTCCAACAATTCGGGGAAATGGCTGATCAGTTCAAAAGCGATTACTTCAACATGCCAGTACACATGGTGCCAACTCCATTGGTCGAGAAAGAATTCTGGCGTATCGTATCCTCCATAGACGAAGATGTGACCGTTGAATACGGAGCTGACCTGCACACCATGGATCATGGTTCAGGTTTTCCTACGAAAACCAGCGTTAATTTATTCACCTGCGATCAGGAGTACGCCGAATCTTCATGGAACCTGAATAATTTACCGGTTTTACAAGGCAGCGTTTTGGGTCACATAAACGCGGATATTAGCGGCATGAAAGTGCCGTGGATGTACGTAGGGATGTGCTTCGCAACCTTTTGTTGGCACAACGAAGACCACTGGAGCTATtccattaattatttacactGGGGAGAACCCAAAACTTGGTATGGTGTTCCTGGAACCCAAGCGGAGAGGTTCGAACATTCCATGAAATCTGCTGCCCCAGAGTTATTCCACAGCCAGCCGGACCTCCTCCACCAACTCGTAACGATCATGAACCCGAACATACTCATGAACGAAGGAGTTCCAGTGTTCAGAACTGATCAACACGCTGGTGAATTTGTTGTGACATTTCCCAGGGCTTACCATGCCGGATTTAATCAAGGGTACAATTTTGCCGAGGCCGTTAATTTCGCACCGGCGGATTGGCTAAAAATGGGCCGCGAATGTATTTCACATTATTCCAATCTTCGACGTTTCTGCGTTTTCTCTCACGACGAACTGGTTTGCAAAATGTCGCTCGATCCCGATTCTCTTGACATCGGTATTGCGACGGCTACGTATCACGATATGCTGCAAATGGTCgacgacgagaaaaaattacgaaaaaatctCCTTGAATGGGGTGTAACTGAGGCAGAAAGGGAAGCATTCGAGTTATTGCCGGATGACGAGAGACAGTGCGAGGCATGTAAAACAACTTGTTTCCTGAGTGCAGTGACGTGCGCATGCCACAATTCACAGCTAGTTTGCCTGAGGCATTTTACTGACCTCTGTGATTGCTCGCCCGACAAGCATACTCTCAGATATCGTTATACCCTCGATGAGTTACCAATAATGTTGCAAAAGCTTAAACTCAAAGCAGAGTCTTTTGACTCCTGGGTAACAAAAGTGAAGGAGGCGATGGACCCGAAAGGTGACAAAATCGAGCTCACGGAACTCAAAGAATTACTCAGTGAGGCTGAGGTGAAAAAGTTCCCGGAGAGTGAGTTACTCACTGCTCTTACTACTGCGGTTCAGGATGCAGAGAAATGCGCGAGCGTTGCTCAGCAGCTACTGAACAACAAGCAGCGAACAAgGACCCGGCAATCTGTTGATACAAAATATAAACTTACAGTCGAAGAATTAACACTGTTTTATAAAGAGATAACAAATCTTTGTTGCGAACTGAAGGAATCCGACGGTGTTAAATACATACTCGATCAAGTTGTTCAGTTTCAAAAAGATGCTGAAGAACTTGAATCGAAGGATGAGGTTTCTGATgttcaaaaacttgaaaaatgcaTAGATTTCGGTGATTCTATTTGTATCGAGTTGCCTCAGCTGGTCAGGCTCAAACAGagATTACTACAGACGCAATGGTTGGAAGAAGTAAAGTCTATTCAAGAGGAGTCGAATTCGGCTAGTCACGAAGACTTGGCGAAGCTTGTAGAAAAAGGGATGTCGATTCCTCCGCATATCAGTATAGAAAACACGCTctcaaaattacaaaacttgatgatgaatatagaaaaatgggAAGACAAGGCCAAGAATTATCTACAGAATAAAAATCGTCAGACGATTGGAACGATAGAGGATTTCTTAAAGGAAGCCGATGCGATCGACGCCTATTTACCAAGTCTGGATACGTTACAAGACATTTTAACTAAGGCTAAGAACTGGACCAAAACCGTtgagggaatacaggcaaaggAAAACTTTCCCTACTACGATACCCTTGACGACTTGGTGCGCAGGGGGCGAAATATTCCTCTCCATTTGGACGCGCTGCCTATTCTCGAGTCGACGTTATCCCAAGCAAAAGTTTGGAAGGAAAGAACAGCAAGGACTTTTCTGAGGAAGAATTCTCACTATAGTTTAATGGAAGCTCTCTCTCCGAGAATCGGAGTTGGCGTTCAGGCgatgaaaactaaaagaaataaGGGGGAGGAACCGGTTGGGGCTGTATTCGTCTGCGACACAAAATTGGATGACACAAACGATTCGGCGAACGTAGTCGCAGCTTTCAAGCTCGCGGAACAGCGAGAAATGGAAGCCATGAGAAATCTTAGAGAGAGGAATTTGACCAAGACTGAGATGGACGATTCGAGATACTGCGTGTGTCGGAGACCTCGTTTCGGCCTAATGCTACAGTGCGAGTTGTGCAAGGATTGGTTTCAttCAAACTGCGTGCCTTTACCAAAAACCACGTACAAAGGAAAGCTGCCCGTATCGCGCGAGACGAAGTTCCTCTGCCCCTGCTGTCTGAGGTCACGCAGACCGAGGCTCGAAACAATATTGGCCCTGTTGGTTAGTTTGCAGAAAATATCAGTGCGGCTGCCCGAAGGCGAAGCACTCCAATGCCTCACTGAACGAGCGATGAACTGGCAGGATCGCGCAAGGCAAGCCCTCGCAACAGATGAGCTTTCCTCAGCGTTGGCGGAGCTCTCGGTCTTATCTCAAAAGCTGGTTGAAGCAGCGGCGAGggagaaaactgaaaaaataatcagcaGCGAGTTGAAAAAGGCTGCCAACAATCCCGAACTGCACCAGCGAGTACAGGCCATCGCTCCACTTAGCGGGGTACATTCCGACGACAGCGTACCTAGCACCGCTgatgacgacgacgacgttgttACCATCGAGGATGACGAGCCTAGTTGTAGTACGTTTAATAGTAACGAACACGATTATTCGTACGTTTCAAAGTTTCAACCGAGTAAACTTCAGTCACAGGACGCCGACGCTGCTGTCGTTTTGTCAGAAACTGCACGGGGTCGGTTAGAGGAGTTAATGATGGAAGGCGACCTTCTCGAAGTCGCTTTAGACGAAACGCAAGACATATGGAAGATCCTAAGTCATACAAATATCCCTAGTAGCGTTCAAAAGTACGCACCTTTCGAAGAAGTTCAAGCTTCCTTCAAACACGACATAAAAGACGTAAAAAAACGGGGGAGGAAACGTAAGTCCGAGGAATTTGAGTTACTCAAAAAACTCGGCAGGCAAAAagtagacgaaaaaaatatcatgaaGCGCAAAGGTCTTgtcaaggagaaaaaaattgttgtagcTGCCGCGGCGGCTGTCGGGCCAATTAAACGGGGCCCCAGAAAGATGAAACGTAAGGAGGGAGAAGAGGGGCCTAAAAAACGCGGAGGtaataggaaaaaaacgaaacaagacACATCTGACGAAGAAGATGATTGCGCAGCGGTCAACTGTCTCCGCCCAAGTGGACGAGAAGTTGACTGGGTTCAATGCGACGGAGGTTGCGACGGTTGGTTCCACATGCACTGTGTTGGCTTGGACCGAGCCGAGATCGCCGAGGAAGATGATTACATATGCAGTAATTGCAAAGACGGCGAACAGAATGTCACGTCTCAGGGATACAACAGTGGCGACACAGAACCGGAGATTCAAGAAGCTTCTTCGTTCGTCAGGACCTACTAA
Protein Sequence
MVSKVDVNIGCEARFGTYHGKDMSEKADTDFEFAIPPEAPVFEPTAEEFLDPLGYISKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTEEGGIEIVTKERRWAKIANRIGYPSGRSVGSILKTHYERILYPFDVFKQGKTLTDIKIEPETDVNEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFTGTDEKPDVLTDCTSPVKQEDCKDECDSDNEKDKDNSKELKKLQFYGPGPKMAGFNTKEVKKPSKTRGVKLHYDFDPLAKYICHNCGRGDTEESMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTPLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLQGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGTQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILMNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECISHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCACHNSQLVCLRHFTDLCDCSPDKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPKGDKIELTELKELLSEAEVKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEELESKDEVSDVQKLEKCIDFGDSICIELPQLVRLKQRLLQTQWLEEVKSIQEESNSASHEDLAKLVEKGMSIPPHISIENTLSKLQNLMMNIEKWEDKAKNYLQNKNRQTIGTIEDFLKEADAIDAYLPSLDTLQDILTKAKNWTKTVEGIQAKENFPYYDTLDDLVRRGRNIPLHLDALPILESTLSQAKVWKERTARTFLRKNSHYSLMEALSPRIGVGVQAMKTKRNKGEEPVGAVFVCDTKLDDTNDSANVVAAFKLAEQREMEAMRNLRERNLTKTEMDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTTYKGKLPVSRETKFLCPCCLRSRRPRLETILALLVSLQKISVRLPEGEALQCLTERAMNWQDRARQALATDELSSALAELSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSVPSTADDDDDVVTIEDDEPSCSTFNSNEHDYSYVSKFQPSKLQSQDADAAVVLSETARGRLEELMMEGDLLEVALDETQDIWKILSHTNIPSSVQKYAPFEEVQASFKHDIKDVKKRGRKRKSEEFELLKKLGRQKVDEKNIMKRKGLVKEKKIVVAAAAAVGPIKRGPRKMKRKEGEEGPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPSGREVDWVQCDGGCDGWFHMHCVGLDRAEIAEEDDYICSNCKDGEQNVTSQGYNSGDTEPEIQEASSFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_01199923;
80% Identity
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