Basic Information

Gene Symbol
KDM5A
Assembly
GCA_018420115.1
Location
JAFFZH010014811.1:52816-62696[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-24 4.1e-21 75.8 0.0 2 89 107 190 106 190 0.94
2 2 3 1.2e+04 -2.6 0.1 49 81 815 845 807 849 0.65

Sequence Information

Coding Sequence
ATGGTCTCTAAGGTGGATGTAAATATCGGGTGCGAGGCTCGCTTCGGTAGTTATCACGGTAAAGATATGAGTGAAAAAGGTGACACAGATTTCGAGTTCGCTATACCTCCCGAGGCTCCAGTCTTCGAGCCAACAGCCGAAGAGTTCCTGGATCCCCTTGGCTACATCTCCAAGATTCGTCCGATAGCCGAAAAGTCAGGAATTTGCAAAATAAAACCGCCACCAAACTGGCAACCACCGTTCGCAGTTGACGTCGACAAGTTTAAATTCGTACCCAGAATCCAGAGGCTGAACGAACTCGAGGCTAAAACAAGGATAAAGTTAAATTTTCTGGACCAAATAGCCAAATTTTGGGAGCTCCAAGGATCTTCCCTGAAAATTCCACTCGTCGAACGAAAGGCTTTGGACCTATATTCTCTGCACAGAATCGTCACCGAAGAAGGTGGGATCGAAGTGGTGACCAAGGAAAGAAGATGGGCAAAGATAGCGAACAGAATAGGATACCCGTCCGGTCGAAGCGTCGGAAGTATTTTAAAGAATCATTACGAGAGAATTTTATACCCATTTGACGTTTTTAAGCAAGGAAAAACCCTCACCGACATCAAAATTGAGCCAGACTCCGAGGTGCACGAGAAGAAGGACCGAGACTACAAACCGCATGGGATTATATCGAGACAGCAGATAAAACCGCCCAACGAGAAGTTCTCCAGACGTTCAAAACGCTTCGCCGGAACTGACGAGAAGCCTGAGGTACTCGCGGACGGTACTTCGCCCCTCAAACAAGAGGACTGCAAGGACGAGTGCGACTCTGACGGAGAAAAGGACAAAGACAACAGCAAGGAGCTAAAAAAGCTACAGTTTTACGGACCTGGACCAAAGATGGCTGGTTTCAATACCAAAGACGTTAAAAAACCAAGCAAAACAAGGGGCGTCAAACTTCACTACGACTTTGACCCGCTCGCCAAGTACATCTGCCACAACTGCGGCAGAGGCGATACGGAGGAGAGCATGCTTCTTTGCGACGGATGCGACGACAGCTATCACACCTTTTGTCTGATGCCTCCGCTGACCGAAATACCAAAGGGAGATTGGCGCTGCCCAAAATGTGTAGCCGAGGAAGTTTCCAAGCCCATGGAAGCTTTTGGCTTCGAGCAAGCGCAGCGCGAGTACACGTTACAACAGTTCGGAGAGATGGCGGACCAGTTCAAAAGCGATTACTTCAACATGCCGGTGCACATGGTTCCGACTCCGTTGGTCGAAAAAGAATTCTGGAGGATCGTTTCCTCTATAGACGAAGACGTGACCGTCGAGTACGGAGCCGATTTGCACACGATGGATCACGGATCTGGTTTCCCGACCAAGACAAGCGTGAATCTGTTCACTTGCGATCAGGAGTACGCGGAGTCGTCCTGGAACCTGAACAACTTGCCTGTTCTGCACAACAGCGTCTTGGGTCACATAAACGCGGATATCAGCGGCATGAAAGTCCCCTGGATGTACGTCGGCATGTGCTTCGCAACTTTCTGCTGGCACAACGAAGACCACTGGAGTTATTCCATAAACTATCTACACTGGGGAGAGCCAAAGACTTGGTACGGAGTCCCCGGCTCACAGGCGGAGAGATTTGAACATTCCATGAAATCGGCGGCTCCCGAGTTGTTCCACAGCCAACCGGACCTTCTCCATCAACTCGTGACGATCATGAACCCCAATATACTCATGAACGAAGGAGTTCCGGTATTCAGAACTGACCAACACGCCGGCGAATTCGTCGTCACATTTCCACGGGCTTATCACGCCGGTTTTAATCAAGGATACAACTTTGCAGAGGCTGTTAATTTCGCCCCAGCCGATTGGCTAAAAATGGGTCGCGAGTGTGTTTCCCATTACTCTAATCTACGACGCTTCTGCGTCTTCTCGCACGACGAACTGGTCTGCAAAATGTCTCTGGATCCTGACTCTCTGGACATCGGTATAGCCACCGCGACTTATCACGACATGCTTCAAATGGTAGACGACGAGAAAAAACTGAGAAAAAATCTGCTCGAATGGGGCGTAACCGAGGCTGAGAGAGAAGCGTTTGAGCTATTGCCGGACGACGAGCGTCAGTGCGAGGCATGTAAAACGACCTGTTTTCTCAGTGCGGTAACGTGCGCCTGCCACAGCTCCCAGTTAGTTTGCCTGAGGCATTTTACAGAGCTGTGCGATTGTCCGCCGGACAAGCATACCCTGAGATATCGTTACACGCTCGATGAGTTGCCGATAATGTTGCAGAAGCTTAAATTAAAAGCCGAGTCTTTTGACTCGTGGGTTACCAAGGTCAAGGAGGCCATGGACCCAAAAGGAGACAAAATCGAACTCACGGAGCTAAAAGAACTCCTGAACGAAGCGGAGGGCAAAAAGTTCCCGGAGAGCGAACTCCTAACTGCGCTCACCACCGCCGTTCAGGACGCTGAAAAATGCGCCAGTGTCGCGCAGCAGCTGCTGAACAACAAACAAAGGACAAGGACCAGGCAGTCAGTCGACACAAAGTACAAGCTCACCGTCGAAGAGTTGACTCTGTTTTACAAAGAGATAACCAATCTTTGCTGCGAATTGAAAGAGTCAGACGGCGTTAAGTACATATTGGATCAGGTGGTACAGTTTCAGAAAGACGCGGAGGAGCTGGAAACCAAAGAAGTGGTTTCGGACCTTAAGAAACTCGAAAAGTGTATCGATTTCGGTGATTCTATTTGCATCGAATTGCCGCAGCTGGTTAGACTGAAACAGAGACTGTTGCAAACGCAGTGGCTAGAAGAGGTCAAGTCGATTCAGGATGACCCGAAATCAGCTAGTCACGAGGAACTTGGAAAGTTGGTAGAAAAAGGACTGACAATACCCCCGCATATAAGCATAGAAAACACCCTGTCAAAACTACAGAGTTTGATGATGAGCATAGAGAAGTGGGAAGAGAAGGCCAAGACCCATCTGCAGAACAAGAATCGTCAGACTCTGACGGCTATAGAAGATTTTGTTAAAGAAGCCGACGCGATCGACGCGTATCTACCCAGCCTGGACAACCTTCAGGATATATTGACAAAGGCTAAAAAGTGGGCTAAAAACGTGGAGGACGTCCAAGCAAAGGAGAATTTTCCCTATTACGATACTCTTGACGATTTAGTTTGCAGGGGTAGAAACATTCCCCTGCATCTAGAACCGCTGCCTATTCTCGAGTCCACATTGTCCCAGGCTAAAGTATGGAAGGAAAGAACGGCGAGGACCTTTTTGAGGAAGAATTCTCACTACACACTGATGGAAGCTCTCTCTCCGAGGATCGGAGTCGGCGTCCAGGCGATGAAGACCAAAAGAAACAAGGGCGAGGAGAGCGTCGGCGCTGTATTCGTGTGCGATACCAAATTGGACGACACTAACGACTCGGCCAACGTCGTGGCGGCGTTCAAATTAGCGGAACAACGCGAAATGGAAGCGATGAGGAATCTTAGAGAGAGGAATTTGACCAAGACTGAGATGGACGATTCTAGATACTGCGTCTGCAGGAGACCTCGCTTCGGACTCATGCTCCAATGCGAGCTGTGCAAGGATTGGTTTCACTCAAACTGTGTGCCTTTACCAAAAACCACGTACAAAGGAAAACTCCCGATGTCTCGAGAGACGAAATTCCTCTGCCCGTGTTGTCTAAGGTCTCGAAGACCCCGGCTAGAAACTATCCTAGCGCTTCTAGTCAGTCTGCAAAAGATTCCGGTCAGGCTTCCGGAGGGAGAGGCGCTACAGTGTTTGACCGAAAGAGCTATGAACTGGCAGGATCGAGCCAGGCAAGCTTTGGCCTCGGACGAACTGTCCTCGGCTCTGGCCAAGCTTTCCGTCCTGTCGCAGAAGCTGGTCGAAGCGGCGGCGAGGGAAAAGACGGAGAAGATAATCAGCAGCGAGCTTAAAAAGGCTGCAAACAACCCGGACCTCCATCAGAGAGTGCAGGCAATCGCTCCGCTAAGCGGCGTACATTCCGACGACAGCGTTCCGAGCACCGCTGACGACGAAGACGACGACGTTGTTACCATCGAGGACGACGAGCCGACTTGTAGTACGTTTAATAGTAACGAACACGATTATTCGTACGTATCAAAGTTTCAACCCAACAAACTTCAGACACACGACGCGGACGCGGCTGTAGTTCTGTCGGAGACTGCCAGAGGCAGACTAGAGGAGCTGATGATGGAGGGCGACCTCCTAGAAGTCGCTCTTGACGAGACGCAACACATATGGAAAATACTTAGCAACACAAACATACCGAGCAGCGTGCAGAAGTACGCGACCTTTGAGGAGGTTCAAGCTACCTTCAAACACGATATGAAGGACGTTAAAAAACGTGGCAGGAAACGAAAGTCCGAGGAGTTTGAAATGCTGAAGAAACTCGGAAGGCAGAAGGTTGACGAGAAGAACGTGATCAAACGGAAGGGAATAAACAAGGAGAAGAAAATATTCGTCCCCGGCACGGGTACGATTGGCGGCGGGCCGATGAAGCGAGGACCCAGAAAGATGAAACGCAAGGAGGGAGAAGAGGGTCCCAAAAAACGTGGTGGAAACAGGAAGAAAACTAAGCAAGACACTTCCGACGAGGAAGAGGACTGCGCAGCGGTCAACTGTCTTCGTCCAAGCGGTCGTGAAGTCGACTGGGTTCAATGTGACGGCGGTTGCAACGGTTGGTTTCACATGCATTGCTTGGCGGGGCCAGATCCCACCGCCGAATCGTTAGGGCTGGACGCACTCCTTTCGCTTTCTCAGTCTCAAGGATACAACAGCGGCGATACGGATCCGGACATCCAGGAGGCAACCTCCTTCGTCAGGACCTACTGA
Protein Sequence
MVSKVDVNIGCEARFGSYHGKDMSEKGDTDFEFAIPPEAPVFEPTAEEFLDPLGYISKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHRIVTEEGGIEVVTKERRWAKIANRIGYPSGRSVGSILKNHYERILYPFDVFKQGKTLTDIKIEPDSEVHEKKDRDYKPHGIISRQQIKPPNEKFSRRSKRFAGTDEKPEVLADGTSPLKQEDCKDECDSDGEKDKDNSKELKKLQFYGPGPKMAGFNTKDVKKPSKTRGVKLHYDFDPLAKYICHNCGRGDTEESMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTPLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLHNSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILMNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVSHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCACHSSQLVCLRHFTELCDCPPDKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPKGDKIELTELKELLNEAEGKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVDTKYKLTVEELTLFYKEITNLCCELKESDGVKYILDQVVQFQKDAEELETKEVVSDLKKLEKCIDFGDSICIELPQLVRLKQRLLQTQWLEEVKSIQDDPKSASHEELGKLVEKGLTIPPHISIENTLSKLQSLMMSIEKWEEKAKTHLQNKNRQTLTAIEDFVKEADAIDAYLPSLDNLQDILTKAKKWAKNVEDVQAKENFPYYDTLDDLVCRGRNIPLHLEPLPILESTLSQAKVWKERTARTFLRKNSHYTLMEALSPRIGVGVQAMKTKRNKGEESVGAVFVCDTKLDDTNDSANVVAAFKLAEQREMEAMRNLRERNLTKTEMDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTTYKGKLPMSRETKFLCPCCLRSRRPRLETILALLVSLQKIPVRLPEGEALQCLTERAMNWQDRARQALASDELSSALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPDLHQRVQAIAPLSGVHSDDSVPSTADDEDDDVVTIEDDEPTCSTFNSNEHDYSYVSKFQPNKLQTHDADAAVVLSETARGRLEELMMEGDLLEVALDETQHIWKILSNTNIPSSVQKYATFEEVQATFKHDMKDVKKRGRKRKSEEFEMLKKLGRQKVDEKNVIKRKGINKEKKIFVPGTGTIGGGPMKRGPRKMKRKEGEEGPKKRGGNRKKTKQDTSDEEEDCAAVNCLRPSGREVDWVQCDGGCNGWFHMHCLAGPDPTAESLGLDALLSLSQSQGYNSGDTDPDIQEATSFVRTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01103329;
90% Identity
iTF_01199923;
80% Identity
-