Dyak005143.2
Basic Information
- Insect
- Drosophila yakuba
- Gene Symbol
- lolal
- Assembly
- GCA_016746365.1
- Location
- NC:5214612-5263307[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2e-11 2.9e-08 33.7 0.0 1 40 717 757 717 760 0.90 2 4 1.1e-13 1.6e-10 40.9 0.1 2 39 772 809 771 812 0.94 3 4 2.6e-17 3.7e-14 52.6 0.0 1 45 826 871 826 871 0.98 4 4 2.7e-19 3.8e-16 58.9 0.0 1 43 878 921 878 922 0.97
Sequence Information
- Coding Sequence
- ATGGCAGCGGTTCGAGGACATCAGTACTTCAGCCTGCGCTGGAACAACTACCAGAACACGATGACGTCAGTGTTCCAGCAGCTGCGCGAGGATCTCTCCTTCGTGGACGTCACCCTGTCCTGCGAGCACGGATCCCTCAAGGCGCACAAGGTCGTCCTGTCCGCCTGTTCGACGTATTTCCAAAAACTACTGCTCGAGAACCCGTGCAAACATCCCACAATCATCCTGCCCGCAGACATTATTTTCACCGACCTGAAAACCATCATCGATTTTGTTTATCGTGGTGAGATCGACGTCACCGAATCGGAATTACAGGGCCTCTTGCGCACCGCCGAGCAGCTAAAGATCAAGGGACTCTGCGAAACCGCCGAGAACGCGGATGACCTAAACGACGCGGCCACTGCAACGATAACGGTTTCAGAGAACATACAGCAGGCGGTCGTTGGCAATATAGTGAACGCCACCATTGTTCCTGGAGCCCCGTCGCCCTCCttggaacagcagcagcaacaccaccagcagcaacagcaagcacaggagcagcaccagcaacagcaggtgcatacccagcagcaacagcagcagcagcaacaaatcaACGCTGCCCTGCTTACGCAACACGGAGTGTCCAGCGGAAGTGTTTCTCTTTCCGGGCAATTGCTGAGCTCCTCggccagcggcagcagcggaaGTTTAGCCGGCGGACAGCAGGCTCCACAGACGCCATCCGGCTTGCAACCGACGCCGCGCAAGTCACGACTTAAGCGCTCCAAGTCGCCGGATTTGCCATcaggcggaggagcaggaagcTCGAGTAGCGGCTCAtcgcagcagcaaccgcagcCAGCGCACCACCACCCGCAGACCATTCTCATCCAGGGCCAAAATCCGAACTCCATTGTGAGCCTTCAGCAGACGGCCGACGGCAATTATATACCAGTTTCGGGTGCTGGCGACGATTCAGAGGCCGAGGACCACGAGCACGAAAACAACCACGGTCACGGGCACGGAGGACACTCGCACGGACACGGCCACGATCATAGTCACGATCACGAGCACGAAAATAAGCCGAACAAGATCTGCAAGACCGAGCACTCGGTGGCCTCGCCGGCATCCAATTCATCCAGCGCCTCGAACAATGCAGCGGGCGTGAGCGGCGTGACTTCCACCGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACggaaaagatacaaaaaatatgactAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGAGCCACCAGCACCATCTGCCACCCCAGTCACCGTCACGGAGCACGTCGATCTGTCCTGCAACCCTAGCACGGACACGCGCGATCTATCAAATCCCACCGAACCTCTCGATATAGACAATCATCTGGCTCAGCAGATCCATCGGCTCGATCAGTCCCCCATGCACTCGATATCGCACCACCATACAGGCGATGAGAGCAACTCGAATCTTGTGCAGCATATCAAGAGCGAAGTGATCGAGGCCAAGCACCTGGCAGCTGCCCAGCAGCATGCACTCAACCAGGCCCAGCAACAGCATGCCCATCACCAggcccaccagcagcaccaacagcatcagcagcagcaacatcaacaacagcagcagcagcaacatcttcATGCTCAGCAGCTCTTGGCCCAGAGtcagatgcagcagcagcagcagcagcaacagcagcagcagcaacaccaccagcagcaacagcaggcagcagccgccgcagcagctggTGTGCATGGCCAGCATGGGGGACACGTGACGCACGCCGACATCGGCGGTGCCACAGTCATGGAGATTGATCCGAGCCAGATTAAACACGAGCCGGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCCTCAGGGCATATGGATATGTATAACTCGGACACGAGTGAGGATTCGATGATGATCGCCAACGGCTCGCCGCACGATCAGAAGGAACCGCACTATACGAATTTGGATCAGCAGCACGGTCTGGGTGGCAGCGTTTGCGGCCCGGGGCCCGGCGGTGCTGGTGGCGGTGGGGGCATGAGTGGTGGGGCTGGCTCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCATCCGCCATTTATGGCATCCCATCGACCACCCTGTGGCAACGTGCTCATCGCCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCGTGGAACGAGGATGCCCTGCAGAATGCCTTGGAGGCGCTGCGTTCTGGCCAGATATCCGCGAACAAAGCGTCAAAGGCCTTCGGCATCCCCTCCTCTACGCTCTACAAGATTGCTCGGCGCGAAGGCATCCGCCTTGCGGCGCCCTTCAATGCCGCCCCGACCACGTGGACGCCCGAGGATCTGGAGCGTGCCTTGGAGGCGATACGGGCGGGTAATACTTCGGTGCAGAAAGCCAGCGCTGAGTTTGGCATACCCACAGGAACACTTTACGGACGCTGCAAACGGGAGGGCATTGAGCTGTCGCGTTCGAATCCAACACCCTGGTCCGAGGATGCCATGAACGAGGCCCTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAACCAGGCGGCCATTCACTATAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGCGGCAAATACGACGTGGTGGCCAACACGAGTGGCGTGGCGCTGTTGAACACCTCGGGCAACACCACCGGCAGCATTGAGATTATCGAGCACAGCCAGGAGAATTCGtTGCATATGTTACAGCAACAGTTCCCGTACAGTCCGTCGCCGCATCCGCCAACGCCGCAGCATCACAGCACGCCGCAGCACCACAGCTCGGCGCAGCAGGGTCCGCCGACGCCGCAGCACATGCAGCAGCACGTGGTgcacatgcaacagcagcagcagcagtcgcccCACCCGGGCCACCATCCGCAGCATATGCAGCAAGACGTGGTTACATCGAGCAGCCAGGTGGTGCAcagccaacagcagcagcagcttcagcagATCTATCAGCACCACGGGACGCCGGAGCGTAGTTGA
- Protein Sequence
- MAAVRGHQYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHPTIILPADIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATIVPGAPSPSLEQQQQHHQQQQQAQEQHQQQQVHTQQQQQQQQQINAALLTQHGVSSGSVSLSGQLLSSSASGSSGSLAGGQQAPQTPSGLQPTPRKSRLKRSKSPDLPSGGGAGSSSSGSSQQQPQPAHHHPQTILIQGQNPNSIVSLQQTADGNYIPVSGAGDDSEAEDHEHENNHGHGHGGHSHGHGHDHSHDHEHENKPNKICKTEHSVASPASNSSSASNNAAGVSGVTSTGQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSNLVQHIKSEVIEAKHLAAAQQHALNQAQQQHAHHQAHQQHQQHQQQQHQQQQQQQHLHAQQLLAQSQMQQQQQQQQQQQQHHQQQQQAAAAAAAGVHGQHGGHVTHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGSVCGPGPGGAGGGGGMSGGAGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSAQQGPPTPQHMQQHVVHMQQQQQQSPHPGHHPQHMQQDVVTSSSQVVHSQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00619229; iTF_00594628; iTF_00594466; iTF_00571817; iTF_00614825; iTF_00525802; iTF_00536684; iTF_00581452; iTF_00547984; iTF_00578452; iTF_00505486; iTF_00505323; iTF_00561678; iTF_00591790; iTF_00591620; iTF_00917999; iTF_00918241; iTF_00489296; iTF_00477938; iTF_00601138; iTF_00600975; iTF_00605492; iTF_00480088; iTF_00539737; iTF_00592469; iTF_00592313; iTF_00539580; iTF_00602681; iTF_00602502; iTF_00527227; iTF_00527385; iTF_00604763; iTF_00604931; iTF_00612731; iTF_00593756; iTF_00514973; iTF_00514810; iTF_00533021; iTF_00504606; iTF_00545886; iTF_00477260; iTF_00481464; iTF_00615486; iTF_00550175; iTF_00596736; iTF_00596569; iTF_00917120;
- 90% Identity
- iTF_00578452;
- 80% Identity
- iTF_00619229;