Dlut018286.2
Basic Information
- Insect
- Drosophila lutescens
- Gene Symbol
- -
- Assembly
- GCA_037075285.1
- Location
- JBAMCF010001083.1:2036089-2042706[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-09 3e-06 27.1 0.0 16 40 640 666 636 669 0.84 2 4 8.5e-14 1.7e-10 40.7 0.1 2 39 681 718 680 721 0.94 3 4 1.5e-17 3e-14 52.7 0.0 1 45 735 780 735 780 0.98 4 4 1.4e-19 2.8e-16 59.2 0.0 1 43 787 830 787 831 0.96
Sequence Information
- Coding Sequence
- ATGCCATTCCCATCCCATACCATCCCAAATCCTCCCCAGcttcatcctcctcctcgcagAAAGGCGGGCCTCTTGCGCACCGCCGAGCAGTTAAAAATCAAAGGCCTATGTGAAACCGCCGAGAATGCGGATGACCTGAACGACGCGGCCACAGCAACGATCACAGTTTCAGAGAACATTCAGCAGGCGGTCGTTGGCAATATTGTTAACGCCACCATAGTTCCCGGAGCTCCATCGCCCTCCCtggaacagcagcagcagcaacaccaccagcaacagcaggcacaggagcagcaccagcaacagcaggtgcatgcccagcagcaacagcagcagcagcaaatcaACGCTGCCCTGTTGACGCAACACGGAGTGCCCAGCGGAAGTGTTTCCCTATCCGGGCAATTGCTTAGCTCCTCGgccagcggcagcagcggaaGCTCAACCGGCGGACAGCAGGCTCCACAGACGCCATCCGGTTTGCAGCCGACGCCACGCAAGTCTCGACTAAAGCGCTCCAAATCACCGGACTTGCCATCGGGCGGAGGAGCCGGAAGCTCTGGAGGCTCGAGTAGCAGCTCATCgcagcagcaaccgcagccggcgcaccaccaccaccacccgcAGACCATTCTCATCCAGGGCCAAAATCCAAACTCCATTGTGAGCCTTCAGCAGACGGCCGACGGCAATTACATACCAGTGTCAGGAACAGGTGACGATTCAGACGCCGAGGACCACGATCACGACCACGAGCACGAACACGGGCACGGAGGACATCCGCACGGACACGGTCACAGCCACGATCACAGTCACGATCACGAGCACGAGAATAAGCCGAATAAGATCTGCAAGACCGAGCAATCGGTGGCCTCGCCGGCGTCCAATTCATCCAGCGCCTCAAACAATGCAGCGGGCGTGAGCGGCGTGACCTCCACCGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACGGAAAAGATTCAAAAAATATGACTAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGAGCCACCAGCACCATCTGCCACCCCAGTCACCGTTACGGAGCACGTCGATCTGTCCTGCAACCCCAGCACGGACACGCGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATCTGGCTCAGCAGATCCATCGGCTCGATCAGTCCCCCATGCACTCGATATCGCATCACCATACAGGCGATGAAAGCAACTCGAATCTGGTGCAGCACATCAAAAGCGAGGTGATCGAGGCCAAGCACCTGGCGGCTGCCCAGCAGCATGCACTTAGCCaggcccagcagcaacatgcccATCACCAggcccaccagcagcagcagcagcaccaacagcaccagcaacagcagcagcaacaacaacagcagcagcagcaacatctccATGCTCAGCAGCTGTTGGCCCAGAgtcagctgcagcagcagcaacatcagcagcagcaacaccatcagcagcaacaacaggcaGCACAGGCCGCAGTAGCAGCTGGAGTGCATGGCCAGCATGGGGGACATGTGACGCATGCCGATATCGGCGGTGCCACAGTCATGGAGATTGATCCGAGCCAGATTAAACACGAGCCGGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCCTCAGGACATATGGACATGTACAACTCGGACACGAGCGAGGATTCGATGATGATCGCCAACGGCTCTCCGCACGATCAGAAGGAGCCGCACTATACGAATTTGGATCAGCAGCACGGCATGGGTGGCAGCGTTTGCGGCCCGGGGCCCGgcggtgctggtggtggtgggggcATGAGTGGTGGGGCTGGCTCTGGCTCTGGCGAGAAAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCTCCATTTATGGCATCCCATCGACCACCCTGTGGCAACGTGCTCATCGCCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCGTGGAACGAGGATGCCCTGCAGAGTGCCTTGGAGGCGCTGCGTTCGGGTCAGATATCCGCGAACAAAGCATCAAAGGCCTTTGGCATCCCCTCCTCGACGCTCTACAAGATTGCCCGGCGCGAGGGCATCCGCCTTGCGGCGCCCTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGATCTGGAGCGTGCCTTGGAGGCGATACGGGCGGGTAATACATCGGTGCAGAAGGCCAGCGCTGAGTTTGGCATACCCACAGGAACACTTTACGGACGCTGCAAACGGGAGGGCATTGAGCTGTCGCGTTCCAATCCAACGCCCTGGTCCGAGGATGCCATGAACGAGGCCCTGAATTCAGTGCGCGTTGGCCAAATGTCCATCAACCAGGCGGCCATTCACTATAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGCGGCAAATACGACGTGGCGGCCAACACGAGTGGCGTGGCGCTGCTCAACACCTCGGGCAACACCACTGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAATTCGttGCATATGTTACAGCAACAGTTCCCGTACAGCCCGTCGCCGCATCCGCCAACGCCGCAGCACCACAGCACGCCGCAGCATCACAGTACGCCGCAGCAGGGACCGCCGACGCCCCAGCACATGCAGCAACACGTAGTTCacatgcaacagcaacagcagcagtcgcCCCATCCGGGCCATCATCCGCAGCACATGCAGCAGGATGTGGTTACATCGAGCAGTCAGGTGGTGcacagccagcagcagcagcagcttcagcAGATCTATCAGCACCACGGGACGCCGGAGCGTAGTTGA
- Protein Sequence
- MPFPSHTIPNPPQLHPPPRRKAGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATIVPGAPSPSLEQQQQQHHQQQQAQEQHQQQQVHAQQQQQQQQINAALLTQHGVPSGSVSLSGQLLSSSASGSSGSSTGGQQAPQTPSGLQPTPRKSRLKRSKSPDLPSGGGAGSSGGSSSSSSQQQPQPAHHHHHPQTILIQGQNPNSIVSLQQTADGNYIPVSGTGDDSDAEDHDHDHEHEHGHGGHPHGHGHSHDHSHDHEHENKPNKICKTEQSVASPASNSSSASNNAAGVSGVTSTGQAIVTQIVVARDGKDSKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSNLVQHIKSEVIEAKHLAAAQQHALSQAQQQHAHHQAHQQQQQHQQHQQQQQQQQQQQQQHLHAQQLLAQSQLQQQQHQQQQHHQQQQQAAQAAVAAGVHGQHGGHVTHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGMGGSVCGPGPGGAGGGGGMSGGAGSGSGEKDALKNQNMSLTKASSIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQSALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVAANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSTPQQGPPTPQHMQQHVVHMQQQQQQSPHPGHHPQHMQQDVVTSSSQVVHSQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00619072;
- 90% Identity
- iTF_00578452;
- 80% Identity
- -