Dleo009228.1
Basic Information
- Insect
- Drosophila leontia
- Gene Symbol
- -
- Assembly
- GCA_008042735.1
- Location
- VNKB01017747.1:4874-12448[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.1e-12 2.1e-08 33.8 0.0 1 40 666 706 666 709 0.90 2 4 5e-14 1.2e-10 41.0 0.1 2 39 721 758 720 761 0.94 3 4 1.2e-17 2.8e-14 52.6 0.0 1 45 775 820 775 820 0.98 4 4 1.2e-19 2.8e-16 59.0 0.0 1 43 827 870 827 871 0.97
Sequence Information
- Coding Sequence
- ATGGTTGAGATGGAGATGGGTGGAGGCGGAGACGGAGATGGTGAGGGCGAGGGCTATGCGGGTGGTGTGTGCTGGTGCTGGGTGACAACAGTGGACAGTGGACGGTGGGGCCTCTTGCGCACCGCCGAACAATTAAAGATCAAGGGCCTCTGCGAAACCGCCGAGAATGCAGATGATTTAAACGACGCAGCCACAGCAACGATCACAGTATCGGAGAACATTCAGCAGGCGGTTGTTGGAAACATTGTGAATGCCACCATAGTTCCTGGAGCAGCTTCGCCATCCTtggaacagcaacagcagcaccaggcACAGGACCAGCAGCAGGTTCAtgcccagcaacagcagcaacaaatcaACGCCGCCTTGCTGACGCAACACGGAGGAGTGCCAAGTGGCAGCAGTGGTGTTCCCCTATCCGGACAGTTGTTGAGCTCCACAGCCAGCGGCAGTAGCGGTAGCTCCGGTTCCGGTGGACAGCAGACTTCGCTGACGCCATCCGGTCTGCAGGCGACGCCACGCAAGTCCCGGCTAAAGCGATCCAAGTCACCGGATTTGCCAACAGGTTCTGGAAGCTCTGGTGGCTCAAGCAGCTCACAGtcacagcaccagcagcaaccgCAGCCGGCACACCACCATCCCCACCAGACCATTCTCATCCAGGGTCAGAATCCCACCTCGATTGTTAGCCTGCAGCAGACGGCCGACGGCAACTATATACCGGTGGGAGCAGGAACTGGCGACGAATCGGACACCGAGAACGATCACGAGCACGAACACGAGCATATCCACGGGCACGGGCACGGACACGGACATCCACACGGACACggccacagtcacagtcacagtcacgaCCACGATCACGAGCTCGAGAATAAACCGAACAAGATCTGCAAGACGGAACAGTCGGTGGCATCGCCGGCATCCAATTCATCGAGCGCCAACTCAAACAATGCAGCGGGCGTGAGCGGCGGCGTGTCCACCACCGGCAACCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACggaaaagatacaaaaaatatgactAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTTACACCCGAGCCACCAGCACCATCCGCCACCCCAGTCACCGTTACGGAGCACGTCGATCTGTCCTGCAACCCCAGCACGGACACGCGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCCCAGCAAATACATCGGCTCGATCAGTCCCCCATGCACTCGATATCCCATCACCATACCGGCGACGAGAGCAACTCGAATCTGGTGCAGCACATCAAGAGCGAGGTGATCGAGGCCAAGCACCTGGCAGCTGCTGCCCAGCAGCATGCTCTCAatcaggcccagcagcagcagcagcagcatgcccATCACcaagcccagcagcagcaccagcaacagcagcaccagcagcagcaacagcagcagcagcaacaacagcagcaacagcaacagcagcatcttCATGCCCAGCAGTTGCAGGcccagttgcagcagcaacagcagcagcaacaccaccagcagcagcaggcggcagcagcagcggccgcagctgctgcaggtgtGCATGGCCAACATGGGGGACACGTGACGCACGCCGATATTGGTGGAGCCACAGTCATGGAGATCGATCCGAGCCAAATTAAACACGAGCCGGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCCTCAGGACATATGGACATGTACAATTCGGACACGAGCGAGGATTCAATGATGATCGCCAACGGCTCGCCACACGATCAGAAGGAGCCGCACTATACGAATTTGGATCAGCAGCACGGTCTGGGCGGCGGCAGCGTTTGTGGCCCGGGGCcaggtggtgctggtggtggtgggggcATGAGTGGTGgggctggctctggctctggcgaGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCGCCATTTATGGCATCCCATCGACCACCCTGTGGCAACGTGCTCATCGTTTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCGTGGAACGAGGATGCTCTGCAGAATGCCTTGGAGGCGTTACGTTCGGGTCAGATATCCGCGAACAAAGCGTCCAAGGCCTTTGGCATACCCTCGTCGACGCTCTACAAGATTGCCCGACGGGAAGGCATCCGCCTTGCAGCACCGTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGATCTGGAGCGTGCCTTGGAGGCGATACGGGCGGGTAATACATCGGTGCAGAAGGCAAGCGCCGAGTTTGGCATACCAACAGGAACACTTTATGGACGCTGCAAGCGGGAGGGCATTGAGCTATCGCGTTCGAATCCAACGCCCTGGTCCGAGGATGCAATGAACGAGGCCCTCAACTCTGTGCGTGTCGGCCAAATGTCCATCAACCAGGCGGCCATTCACTACAACCTGCCCTACAGCTCGCTCTACGGTCGCTTCAAGCGTGGCAAATACGATGTGGTGGCCAATACGAGTGGCGTGGCGCTGCTCAACACCTCGGGCAATACCACCGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAACTCGttGCACATGTTGCAGCAACAGTTCCCGTATAGTCCGTCGCCGCATCCGCCAACGCCGCAGCATCACAGCACGCCGCAGCATCATAGCTCGGCGCAGGGGCCGCCCACGCCGCAGcacatgcagcagcaacagcacgtGGTGCATATGCAACAGCAGTCGCCCCATCCGGGTCACCATCCGCAGCACATGCAGCAGGATGTGGTCACATCGAGCAGCCAGGTGGTGCacagccaacagcagcagcagcagcagcttcagcagaTCTATCAGCACCACGGGACACCTGAGCGTAGTTGA
- Protein Sequence
- MVEMEMGGGGDGDGEGEGYAGGVCWCWVTTVDSGRWGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATIVPGAASPSLEQQQQHQAQDQQQVHAQQQQQQINAALLTQHGGVPSGSSGVPLSGQLLSSTASGSSGSSGSGGQQTSLTPSGLQATPRKSRLKRSKSPDLPTGSGSSGGSSSSQSQHQQQPQPAHHHPHQTILIQGQNPTSIVSLQQTADGNYIPVGAGTGDESDTENDHEHEHEHIHGHGHGHGHPHGHGHSHSHSHDHDHELENKPNKICKTEQSVASPASNSSSANSNNAAGVSGGVSTTGNQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSNLVQHIKSEVIEAKHLAAAAQQHALNQAQQQQQQHAHHQAQQQHQQQQHQQQQQQQQQQQQQQQQQHLHAQQLQAQLQQQQQQQHHQQQQAAAAAAAAAAGVHGQHGGHVTHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGGSVCGPGPGGAGGGGGMSGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSAQGPPTPQHMQQQQHVVHMQQQSPHPGHHPQHMQQDVVTSSSQVVHSQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00619072;
- 90% Identity
- iTF_00594628;
- 80% Identity
- -