Dmim011771.1
Basic Information
- Insect
- Drosophila mimetica
- Gene Symbol
- -
- Assembly
- GCA_037075245.1
- Location
- JBAMCH010000014.1:13580323-13586041[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.7e-12 5.7e-09 35.7 0.0 1 40 646 686 646 689 0.90 2 4 7.9e-14 1.2e-10 41.0 0.1 2 39 701 738 700 741 0.94 3 4 1.8e-17 2.8e-14 52.7 0.0 1 45 755 800 755 800 0.98 4 4 1.9e-19 2.9e-16 59.1 0.0 1 43 807 850 807 851 0.97
Sequence Information
- Coding Sequence
- ATGCCGTCCCCGGCCATCCATCCCGCACCAAATCCTCCCCAGCTTCATCCTCCGCTCTGCAGAAAGGCgGGCCTCTTACGGACCGCCGAGCAGCTAAAGATCAAAGGCCTCTGCGAAACCGCCGAGAATGCTGATGACCTGAACGACGCGGCCACTGCAACGATAACAGTTTCAGAGAACATTCAGCAGGCGGTCGTTGGCAATATCGTTAACGCCACCATAGTTCCCGGAGCTCCATCGCCCTCCctggaacagcagcagcagcagcaacaccaccagcaacagcaggcacaggagcagcatcagcaacagcaggtgcatgcccagcagcaacagcagcagcagcaaatcaACGCTGCCCTGTTGACGCAGCACGGAGTGCCCAGCGGAAGTGTTTCCCTATCCGGGCAATTGCTTAGCTCCTCGGCCAGCGGCAGCAACGGAAGTTCAGCCGGCGTACAGCAGGCCCCACAGACGCCATCCGGTTTGCAGCCGACGCCACGCAAGTCTCGACTTAAGCGCTCCAAATCGCCGGACTTGCCATCGGGCGGAGGAGCAGGAAGCTCTGGCGGCTCAAGTAGCGGCTCATCGCAGCAGCAACCGCAGCCggcgcaccaccaccacccgcaGACCATTCTCATCCAGGGTCAAAATCCAAACTCCATCGTGAGCCTACAGCAGACGGCCGACGGCAATTATATACCAGTGTCAGGAGCTGGCGACGATTCAGACGCCGAGGACCACGATCACGACCACGAACACGGACACGGGCACGGAGGACATCCGCACGGACACGGTCACAGCCACGATCACAGTCACGATCACGAGCACGAGAGTAAGCCGAATAAGATCTGCAAGACCGAGCAATCGGTGGCCTCGCCGGCGTCCAATTCATCCAGCGCCTCAAACAATGCAGCGGGCGTGAGCGGCGTGACCTCCACCGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACggaaaagatacaaaaaatatgactaGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGAGCCACCAGCACCCTCTGCCACCCCAGTCACCGTTACGGAGCACGTCGATCTGTCCTGCAACCCCAGCACGGACACGCGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATCTGGCTCAGCAGATCCATCGGCTCGATCAGTCCCCCATGCACTCGATATCGCATCACCATACAGGCGATGAAAGCAACTCGAATCTGGTGCAGCACATCAAAAGCGAGGTGATCGAGGCCAAGCACCTAGCAGCTGCCCAGCAGCATGCACTTAGCCaggcccagcagcaacatgcacaTCACCAggcccaccagcagcagcagcaccaacagcaccagcaacagcagcagcaacaacaacagcagcagcaacagcaacatctcCATGCACAGCAGCTGTTGGCCCAGAgtcagttgcagcagcaacagcagcagcaacaccatcagcagcaacagcaggcagcacaagcagcagcggcagcagcagcagctggagtgCATGGCCAGCATGGGGGACATGTGACGCATGCCGATATCGGCGGTGCCACAGTCATGGAGATCGATCCGAGCCAGATAAAACACGAGCCGGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCCACAGGACATATGGACATGTACAACTCGGACACGAGCGAGGATTCGATGATGATCGCCAACGGCTCGCCGCACGATCAGAAGGAGCCGCACTATACGAATTTGGATCAGCAGCACGGCATGGGTGGCAGCGTTTGCGGCCCGGGGCCCGGCGGTGCTGGTGGCGGTGGGGGCATGAGTGGTGGGGCTGGCTCTGGCTCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCTCCATTTATGGCATCCCATCGACCACCCTGTGGCAACGTGCTCATCGCCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCGTGGAACGAGGATGCCCTGCAGAATGCCTTGGAGGCGCTGCGTTCGGGTCAGATATCCGCGAACAAAGCATCAAAGGCCTTCGGCATCCCCTCCTCGACGCTCTACAAGATTGCCCGGCGCGAGGGCATCCGCCTTGCGGCGCCCTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGATCTGGAGCGTGCCTTGGAGGCGATACGGGCGGGTAATACATCGGTGCAGAAGGCCAGCGCTGAGTTTGGCATACCCACAGGAACACTTTACGGACGCTGCAAACGGGAGGGCATTGAGCTGTCGCGTTCGAATCCAACGCCCTGGTCCGAGGATGCCATGAACGAGGCCCTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAACCAGGCGGCCATTCACTATAACCTGCCCTACAGCTCGCTCTACGGACGCTTCAAGCGCGGCAAATACGACGTGGTGGCCAACACGAGTGGCGTGGCGCTGCTCAACACCTCGGGCAACACCACTGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAATTCGttGCATATGTTACAGCAACAGTTCCCGTACAGCCCGTCGCCGCATCCGCCAACGCCGCAGCACCACAGCACGCCGCAGCATCACAGTACGCCGCAGCAGGGACCGCCGACGCCCCAGCACATGCAGCAACACGTAGTACacatgcaacagcaacagcagcagtcgcCCCATCCGGGCCATCATCCGCAGCACATGCAGCAGGATGTGGTTACGTCCAGCAGTCAGGTGGTgcacagccagcagcagcagcttcagcAGATCTATCAGCACCACGGGACGCCGGAGCGTAGTTGA
- Protein Sequence
- MPSPAIHPAPNPPQLHPPLCRKAGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATIVPGAPSPSLEQQQQQQHHQQQQAQEQHQQQQVHAQQQQQQQQINAALLTQHGVPSGSVSLSGQLLSSSASGSNGSSAGVQQAPQTPSGLQPTPRKSRLKRSKSPDLPSGGGAGSSGGSSSGSSQQQPQPAHHHHPQTILIQGQNPNSIVSLQQTADGNYIPVSGAGDDSDAEDHDHDHEHGHGHGGHPHGHGHSHDHSHDHEHESKPNKICKTEQSVASPASNSSSASNNAAGVSGVTSTGQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSNLVQHIKSEVIEAKHLAAAQQHALSQAQQQHAHHQAHQQQQHQQHQQQQQQQQQQQQQQHLHAQQLLAQSQLQQQQQQQHHQQQQQAAQAAAAAAAAGVHGQHGGHVTHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGMGGSVCGPGPGGAGGGGGMSGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASSIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSTPQQGPPTPQHMQQHVVHMQQQQQQSPHPGHHPQHMQQDVVTSSSQVVHSQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00619072;
- 90% Identity
- iTF_00578452;
- 80% Identity
- -