Basic Information

Insect: Drosophila takahashii
Gene Symbol: -
Assembly: GCA_018152695.1
Location: JAECXN010000107.1:6514505-6522961[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 2.3e-12 4.5e-09 35.7 0.0 1 40 654 694 654 697 0.90

2 4 4.9e-14 9.5e-11 41.0 0.1 2 39 709 746 708 749 0.94

3 4 1.1e-17 2.2e-14 52.7 0.0 1 45 763 808 763 808 0.98

4 4 1.2e-19 2.2e-16 59.0 0.0 1 43 815 858 815 859 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	2.3e-12	4.5e-09	35.7	0.0	1	40	654	694	654	697	0.90
2	4	4.9e-14	9.5e-11	41.0	0.1	2	39	709	746	708	749	0.94
3	4	1.1e-17	2.2e-14	52.7	0.0	1	45	763	808	763	808	0.98
4	4	1.2e-19	2.2e-16	59.0	0.0	1	43	815	858	815	859	0.97

Sequence Information

Coding Sequence: ATGCCATTCCCATCCCATCCCATCCCATCCCATCCCATCCCAAATCCTCCCCAGCTTCATCCTCCTCCTCGCAGAAAGGCGGGCCTCTTGCGCACCGCCGAGCAGTTAAAGATCAAAGGCCTCTGCGAAACCGCCGAGAATGCGGATGACCTAAACGACGCGGCCACAGCAACGATCACAGTTTCAGAGAACATTCAGCAGGCGGTCGTTGGCAATATTGTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCAACGCCGCCCTGTTGACGCAGCACGGAGTGCCCAGCGGAAGTGTTTCCCTATCCGGGCAATTGCTTAGCTCCTCGGCCAGCGGCAGCAGCGGAAGCTCAGCCGGCGGACAGCAGGCTCCACAGACGCCATCCGGTTTGCAGCCGACGCCCCGCAAGTCTCGACTAAAGCGCTCCAAGTCCCCGGACTTGCCGTCGGGCGGAGGAGCAGGAAGCTCTGGAGGCTCGAGTAGCGGCTCATCGCAGCAGCAACCGCAGCCGGCGCACCACCACCACCCGCAGACCATTCTCATCCAGGGCCAAAATCCGAACTCCATCGTGAGCCTTCAGCAGACGGCCGACGGCAATTATATACCAGTGTCGGGAACAGGCGACGATTCGGAAGCCGAGGACCACGATCACGACCACGAGCACGAACACGGACACGGAGGACATCCGCACGGACACGGTCACGGTCACAGCCACGATCACAGTCACAGTCACGATCACGAGCACGAGAACAAGCCGAACAAGATCTGCAAGACCGAGCAATCGGTGGCCTCGCCGGCGTCCAATTCATCCAGCGCCTCGAACAATGCAGCGGGCGTGAGCGGCGTGACCTCCACCGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACGGAAAAGATTCAAAAAATATGACTAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGAGCCACCAGCACCATCTGCCACCCCAGTCACCGTTACGGAGCACGTCGATCTGTCCTGCAACCCCAGCACGGACACGCGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATCTGGCTCAGCAGATCCATCGGCTCGATCAGTCCCCCATGCACTCGATATCGCATCACCATACAGGCGATGAAAGCAACTCGAATCTGGTGCAGCACATCAAAAGCGAGGTGATCGAGGCCAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGGGACATGTGACGCATGCCGATATCGGCGGTGCCACCGTCATGGAGATCGATCCGAGCCAGATTAAACACGAGCCGGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCCTCAGGACATATGGACATGTACAACTCGGACACGAGCGAGGATTCGATGATGATCGCCAACGGCTCGCCGCACGATCAGAAGGAGCCGCACTATACGAATTTGGATCAGCAGCACGGCATGGGTGGCAGCGTTTGCGGCCCGGGGCCCGGCGGTGCTGGTGGCGGTGGGGGCATGAGTGGTGGGGCTGGCTCTGGCTCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCTCCATTTATGGCATCCCATCGACCACCCTGTGGCAACGTGCTCATCGCCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCGTGGAACGAGGATGCCCTGCAGAATGCCTTGGAGGCGCTGCGTTCGGGTCAGATATCCGCGAACAAGGCATCAAAGGCCTTTGGCATCCCCTCCTCGACGCTCTACAAGATTGCCCGGCGCGAGGGCATCCGCCTTGCGGCGCCCTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGATCTGGAGCGTGCCTTGGAGGCGATACGGGCGGGTAATACATCGGTGCAGAAGGCCAGCGCTGAGTTTGGCATACCCACAGGAACACTTTACGGACGCTGCAAACGGGAGGGCATTGAGCTGTCGCGTTCGAATCCAACGCCCTGGTCCGAGGATGCCATGAACGAGGCCCTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAACCAGGCGGCCATTCACTACAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGCGGCAAATACGACGTGGTGGCCAACACGAGTGGCGTTGCGCTGCTCAACACCTCGGGCAACACCACTGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAATTCGTTGCATATGTTACAGCAACAGTTCCCGTACAGCCCGTCGCCGCATCCGCCAACGCCGCAGCACCACAGCACGCCGCAGCACCACAGTACGCCGCAGCAGGGACCGCCGACGCCCCAGCACATGCAGCAGCACGTAGTTCACATGCAACAGCAGCAGTCGCCCCATCCGGGCCATCATCCGCAGCACATGCAGCAGGATGTGGTTACATCGAGCAGTCAGGTGGTGCACAGCCAGCAGCAGCAGCAGCTTCAGCAGATCTATCAGCACCACGGGACGCCGGAGCGTAGTTGA
Protein Sequence: MPFPSHPIPSHPIPNPPQLHPPPRRKAGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINAALLTQHGVPSGSVSLSGQLLSSSASGSSGSSAGGQQAPQTPSGLQPTPRKSRLKRSKSPDLPSGGGAGSSGGSSSGSSQQQPQPAHHHHPQTILIQGQNPNSIVSLQQTADGNYIPVSGTGDDSEAEDHDHDHEHEHGHGGHPHGHGHGHSHDHSHSHDHEHENKPNKICKTEQSVASPASNSSSASNNAAGVSGVTSTGQAIVTQIVVARDGKDSKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSNLVQHIKSEVIEAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGHVTHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGMGGSVCGPGPGGAGGGGGMSGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASSIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSTPQQGPPTPQHMQQHVVHMQQQQSPHPGHHPQHMQQDVVTSSSQVVHSQQQQQLQQIYQHHGTPERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00619072;
90% Identity: iTF_00588058;
80% Identity: -