Basic Information

Insect: Drosophila guanche
Gene Symbol: lolal
Assembly: GCA_900245975.1
Location: NW:8505409-8550324[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 8.6e-12 1.6e-08 33.7 0.0 1 40 736 776 736 779 0.90

2 4 4.7e-14 8.8e-11 40.9 0.1 2 39 791 828 790 831 0.94

3 4 1.1e-17 2e-14 52.5 0.0 1 45 845 890 845 890 0.98

4 4 1.1e-19 2.1e-16 58.9 0.0 1 43 897 940 897 941 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	8.6e-12	1.6e-08	33.7	0.0	1	40	736	776	736	779	0.90
2	4	4.7e-14	8.8e-11	40.9	0.1	2	39	791	828	790	831	0.94
3	4	1.1e-17	2e-14	52.5	0.0	1	45	845	890	845	890	0.98
4	4	1.1e-19	2.1e-16	58.9	0.0	1	43	897	940	897	941	0.97

Sequence Information

Coding Sequence: ATGGCTGCCGTACGAGGACATCAGTACTTTAGCCTGCGATGGAACAACTATCAGAACACGATGACATCCGTGTTCCAGCAACTGCGCGAAGATCTCTCCTTTGTCGATGTGACCTTGTCCTGCGAACACGGTTCCCTCAAGGCACACAAGGTTGTACTCTCCGCCTGCTCGACATACTTtcaaaagctgctgctggagaatcCATGCAAACATCCCACAATCATCCTACCCGCCGATATCATATTCACAGATCTTAAAACAATCATCGATTTCGTCTACCGCGGCGAGATTGATGTCACCGAATCAGAACTACAGGGCCTCTTGCGCACCGCCGAACAACTGAAGATCAAAGGCCTCTGTGAGACAGCGGAAAACGCTGATGATTTGAACGACGCGGCCACAGCGACAATAACCGTGTCGGAGAACATACAGCAGGCAGTCGTGGGCAGCATTGTGAATCCCAGCATAGTGCCGGGTGGAGCAGCCTCACCCTcgctcgagcagcagcaccatcagcaccaccaacagGCCCAAgcgcaggcccaggcccacgaacaggagcaacaacagcagcagcaacagcaacagcaacagcagcaggtgcatgcccagcagcatcagcagcagcaacaaatcaaCGCTTTGTTGACCCAACACGGAGTGGCCAGTGGCGGCAGTGTACCTTTGGGTGGACAGCTGCTCAGCACGACAGCGAGtggtagcagcggcagcggggcTGGCAGCTTGCAGTCACAGTCCGGGCTCCAGCCGACGACGCGCAAGTCGCGACTCAAGCGATCCAAGTCTCCGGATCTACAGCTGGTCGGaggcagcgccagcggcagcagcagcggcgtctcccagcagccacagccggcGCATCATCACTCGCAGACGCTGCTCATACAGGGCCAGAATCAGACATCCATTGTGAGCCTACAGCAGACGGCCGAGGGCAATTATATACCCGTGCCGGGCACCGGTGACGAGTCGGACGTGGATCACGATCACGATCACGATCACGACCACTCCCACGATCACTCACACAATCTTTCACACTCCCACGAacacgagcacgagcacgagaGCAAGCCGAGCAAAATCTGCAAGACAGAGCAATCGCTGGCCTCGCCATCGTCCAACTCGTCCAGCCACTCGAACAATGCAACGGGCGTGAGCGGCGGAGTGACCTCAGCGGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACggaaaagatacaaaaaatatgactAGTTTAGGCATGGGCATGAACGGAGGCCTGCTAGGCGTGCCCATGGGATTCCTGGACTTCACACCCGAGCCACCAGCACCATCTGCCACACCAGTCACCGTTACGGAGCACGTCGACCTCTCGTGCAACCCCAGCACGGACACACGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCGCAGCAGATCCATCGACTCGATCAATCTCCCATGCATTCGATAGCCCATCATCATACCGGGGACGAGAGCAACTCGAACCTCGTGCAGCACATCAAGAGCGAGGTGATCGATGCCAAGCATCTGGCGGCTGCCCAGCAGCATGCGATCTcccacgcccagcagcagcatgcccatcatcaggcacagcagcagcagcagcaacagcagcagcagcagcagcagcaacacctcCATGCCCAGCAGCTGATGGCCCAAAGTCaggcccaacagcagcagcagcagcagcagcagcaacaacagcagcatcagcagcaacagcagcagcatcaccagcagcaacagcaacagcaacagcagcaggcggcggctgcggctgcggcagctgtgCACGCCCAACATGGTGGGCATGTGACGCACGCGGAGATCAGTGGGGCAACTGTCATGGAGATTGATCCGAGCCAAATAAAGCATGAGCCTGGAATGATTATAACGCCGGAGATTGTCAACATGATGTCCTCAGGGCATATGGATATGTACAATTCGGATACGAGCGAGGATTCGATGATGATCGCGAATGGTTCGCCGCACGATCAGAAGGAGCCGCACTATACGAACTTGGATCAGCAGCATGGAGGCGGGCTGGGTGGCAGCGTTTGCGGCCccggtggtgctggtggtggtgggggcatGGGTGGTgggactggctctggctctggcgagAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATCCCATCGACCACCCTCTGGCAGCGTGCTCATCGTTTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCATGGAACGAGGATGCCCTGCAGAATGCCTTGGAGGCGTTACGTTCGGGCCAAATATCCGCCAATAAGGCATCGAAAGCCTTTGGCATACCCTCATCGACGCTCTACAAGATAGCGCGTCGTGAGGGCATCCGCCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACGCCCGAGGACTTGGAGCGTGCATTGGAGGCGATCCGGGCGGGTAATACCTCTGTACAGAAAGCCAGCGCTGAGTTTGGCATACCCACAGGAACACTTTACGGACGCTGCAAGCGGGAGGGCATTGAGCTGTCGCGCTCGAATCCCACACCATGGTCCGAGGATGCCATGAACGAGGCCCTCAACTCAGTGCGGGTTGGCCAAATGTCCATCAACCAGGCGGCCATCCATTACAACCTGCCCTACAGCTCGCTGTACGGCCGCTTCAAGCGTGGCAAGTACGATGTGGTGGCAAACACAAGCGGCGTATCGCTGATGAACACCTCGGGCAACACCACGGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAATTCGatGCATATGTTGCAGCAACAGTTCCCGTACAGTCCATCGCCGCATCCGGCAACGCCGCAGCATCATAGCACACCGCAGCATCACAGCTCGTCTCAGGGGCCGCCAACGCCGCAGCATATGCAGCAGCATGTGGTGCacatgcagcaacagcagtcgccGCATCAGGGCCACCATCCGCAGCACATGCAACAGGACGTGGTAACGTCAAGCAGCCAGGTGGTGCatagccaacagcaacagcagcaacagcagcagcagcagcttcagcagatCTATCAGCACCATGGCACGCCCGAGCGTAGTTGA
Protein Sequence: MAAVRGHQYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHPTIILPADIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGSIVNPSIVPGGAASPSLEQQHHQHHQQAQAQAQAHEQEQQQQQQQQQQQQQVHAQQHQQQQQINALLTQHGVASGGSVPLGGQLLSTTASGSSGSGAGSLQSQSGLQPTTRKSRLKRSKSPDLQLVGGSASGSSSGVSQQPQPAHHHSQTLLIQGQNQTSIVSLQQTAEGNYIPVPGTGDESDVDHDHDHDHDHSHDHSHNLSHSHEHEHEHESKPSKICKTEQSLASPSSNSSSHSNNATGVSGGVTSAGQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTGDESNSNLVQHIKSEVIDAKHLAAAQQHAISHAQQQHAHHQAQQQQQQQQQQQQQQHLHAQQLMAQSQAQQQQQQQQQQQQQHQQQQQQHHQQQQQQQQQQAAAAAAAAVHAQHGGHVTHAEISGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGGGLGGSVCGPGGAGGGGGMGGGTGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLMNTSGNTTGSIEIIEHSQENSMHMLQQQFPYSPSPHPATPQHHSTPQHHSSSQGPPTPQHMQQHVVHMQQQQSPHQGHHPQHMQQDVVTSSSQVVHSQQQQQQQQQQQLQQIYQHHGTPERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00619072;
90% Identity: iTF_00535963;
80% Identity: iTF_00514973;