Basic Information

Insect: Drosophila eugracilis
Gene Symbol: lolal
Assembly: GCA_018153835.1
Location: NW:6351174-6422612[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 8.5e-12 1.7e-08 33.7 0.0 1 40 729 769 729 772 0.90

2 4 4.7e-14 9.4e-11 40.9 0.1 2 39 784 821 783 824 0.94

3 4 1.1e-17 2.2e-14 52.5 0.0 1 45 838 883 838 883 0.98

4 4 1.1e-19 2.2e-16 58.9 0.0 1 43 890 933 890 934 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	8.5e-12	1.7e-08	33.7	0.0	1	40	729	769	729	772	0.90
2	4	4.7e-14	9.4e-11	40.9	0.1	2	39	784	821	783	824	0.94
3	4	1.1e-17	2.2e-14	52.5	0.0	1	45	838	883	838	883	0.98
4	4	1.1e-19	2.2e-16	58.9	0.0	1	43	890	933	890	934	0.97

Sequence Information

Coding Sequence: ATGGCAGCGGTACGAGGACATCAGTATTTCAGCCTTCGCTGGAATAACTATCAGAATACGATGACGTCAGTATTCCAACAGCTACGGGAGGATCTGTCCTTTGTGGACGTAACCCTGTCCTGTGAACATGGATCCTTAAAGGCGCATAAGGTTGTTCTCTCCGCCTGTTCGACGTATTTCCAAAAACTACTGCTGGAAAATCCATGCAAACATCCCACAATCATCCTGCCCGCCGATATTATCTTCACCGATCTAAAAACCATTATCGATTTTGTTTATCGCGGAGAAATCGATGTCACCGAATCGGAATTACAGGGCCTCTTACGTACCGCCGAGCAGCTAAAGATCAAAGGCCTCTGCGAAACCGCCGAGAACGCGGATGACCTGAACGACGCCGCCACAGCAACGATCACAGTTTCAGAGAACATACAGCAGGCGGTTGTTGGTAATATTGTGAATGCCACCATAGTTCCCGGAGCACCATCGCCTTCGttggaacaacaacaacaacagcagcagcagcagcaacagcaacaccaccaccagcagcaacaacagcaggcacaggagcaacatcagcaacagcaggtgcatgcccagcaacaacaacaacagcagcagcaacaaatcaaCGCTGCTCTGCTTACACAACCCGTGCAATTGCTTAGCTCATCGGCCAGCGGCAGTAGCGGAAGTTCAGCCGGCGGACAGCAGGCAGGACAGACGTCAGGTTCCGGTTTGCAGCCAACGCCGCGCAAGACTAGACTAAAGCGCTCGAAATCGCCAGATTTGCCAACGggcggaggaggagcaggaagcTCAAGTAGCAGCTCATCGCAACCGCAGCCGGCGcatcatcaccaccacccGCAAACCATTCTCATTCAGGGCCAAAATCCAAACTCTATTGTTAGCCTACAGCAGACGGCCGACGGGAATTATATACCAGTGTCAGGAACTGGTGAAGATTCCGACGTCGAAGAGCACGATCACGAACACGGTCACGGGCACGGAGGACATTCGCACGGACACGGTCACGATCACGAGCACGAGAATAAGCCGAATAAGATCTGCAAAACCGAGCAATCGGTGGCATCGCCGGCGTCAAATTCATCCAGCGCCTCGAACAATGCAGCGGGCGTGAGCGGCGTGACATCCACCGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACggaaaagatacaaaaaatatgaCTAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGAGCCACCAGCACCATCTGCCACCCCAGTCACCGTCACGGAACACGTCGATCTGTCCTGCAATCCCAGCACGGACACTCGCGATCTATCAAATCCCACCGAACCGCTCGATATAGACAATCATCTGGCTCAGCAGATCCATCGACTCGATCAGTCCCCCATGCACTCGATATCGCATCACCATACAGGCGATGAGAGCAACTCGAATCTGGTGCAGCACATCAAAAGCGAAGTGATCGACGCCAAGCACCTGGCAGCGGCCCAACAGCATGCACTTAGCCaggcccagcagcaacatgccCATCATCAGGcccaccaacagcagcagcagcagcaacaacaccaacagcatcagcaacagcagcagcagcagcagcaacaacaacagcaacagcaacatcttCATGCCCAGCAGCTGTTGGCTCAGAgtcagttgcagcagcagcagcagcaacagcagcagcaacatcatcagcagcaacaacagcaggcagcagcagcagcagcggcggcagcagcagcagctgctggtgTGCATGGCCAGCATGGGGGACATGTGACGCATGATATTAGTGGGGCAACAGTCATGGAGATCGATCCGAGCCAGATTAAACACGAGCCGGGTATGATAATAACGCCAGAGATTGTCAATATGATGTCCTCAGGACATATGGACATGTACAACTCGGACACGAGCGAGGATTCAATGATGATTGCCAACGGCTCGCCGCATGATCAGAAGGAGCCGCACTATACGAATTTGGATCAACAGCACGGTCTGGGTGGCAGCGTTTGTGGCCCGGGGCCCGGCGGTGCTGGTGGCGGTGGGGGCATGAGTGGTGGggctggctctggctctggcgaGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCATCCGCCATTTATGGCATCCCATCGACCACCCTTTGGCAACGTGCTCATCGCCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCATGGAACGAGGATGCCCTGCAGAATGCCTTGGAGGCGTTACGTTCGGGTCAGATATCCGCGAACAAAGCGTCAAAGGCATTCGGTATACCATCATCGACGCTCTACAAGATTGCCCGACGCGAGGGCATTCGACTTGCGGCGCCGTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGATCTGGAGCGTGCCTTGGAGGCGATACGGGCGGGTAATACATCGGTGCAGAAAGCCAGTGCTGAGTTTGGCATACCCACAGGAACACTTTACGGACGCTGCAAACGGGAGGGCATCGAGCTGTCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCCCTGAATTCAGTGCGCGTTGGCCAAATGTCCATCAACCAGGCGGCCATTCACTATAACCTGCCCTACAGCTCGCTCTATGGACGCTTCAAGCGCGGCAAATACGATGTGGTGGCCAACACGAGTGGCGTGGCGCTGCTCAACACCTCGGGCAACACCACTGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAATTCGtTGCATATGTTACAGCAACAGTTCCCGTACAGTCCATCGCCGCATCCGCCAACGCCGCAGCATCATAGTACGCCGCAGCATCACAGTTCGGCGCAACAGGGTCCGCCGACGCCTCAGCACATGCAACAGCACGTGGTACatatgcaacagcaacaacagtcgCCCCATCCGGGCCATCATCCCCAGCATATGCAACAGGATGTGGTTACATCGAGCAGTCAGGTGGTGcacagccagcagcagcagcagcttcagcAGATCTATCAGCACCATGGGACGCCGGAGCGTAGTTGA
Protein Sequence: MAAVRGHQYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHPTIILPADIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATIVPGAPSPSLEQQQQQQQQQQQQHHHQQQQQQAQEQHQQQQVHAQQQQQQQQQQINAALLTQPVQLLSSSASGSSGSSAGGQQAGQTSGSGLQPTPRKTRLKRSKSPDLPTGGGGAGSSSSSSSQPQPAHHHHHPQTILIQGQNPNSIVSLQQTADGNYIPVSGTGEDSDVEEHDHEHGHGHGGHSHGHGHDHEHENKPNKICKTEQSVASPASNSSSASNNAAGVSGVTSTGQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSNLVQHIKSEVIDAKHLAAAQQHALSQAQQQHAHHQAHQQQQQQQQHQQHQQQQQQQQQQQQQQQHLHAQQLLAQSQLQQQQQQQQQQHHQQQQQQAAAAAAAAAAAAAGVHGQHGGHVTHDISGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGSVCGPGPGGAGGGGGMSGGAGSGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSAQQGPPTPQHMQQHVVHMQQQQQSPHPGHHPQHMQQDVVTSSSQVVHSQQQQQLQQIYQHHGTPERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00619072;
90% Identity: iTF_00578452;
80% Identity: iTF_00505486;