Lmag010126.1
Basic Information
- Insect
- Lordiphosa magnipectinata
- Gene Symbol
- lolal
- Assembly
- GCA_018904285.1
- Location
- JBAMBO010001695.1:38899-85278[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.4e-11 3.4e-08 33.7 0.0 1 40 686 726 686 729 0.90 2 4 7.7e-14 1.9e-10 41.0 0.1 2 39 741 778 740 781 0.94 3 4 1.8e-17 4.4e-14 52.6 0.0 1 45 795 840 795 840 0.98 4 4 1.8e-19 4.4e-16 59.0 0.0 1 43 847 890 847 891 0.97
Sequence Information
- Coding Sequence
- ATGGCTTTTTTTTCGGCCTATGCGCTACAGTCGGGCAGCAGTCGCAGCAGCATCGACAGCCTTGAGCCACCCAACAACCACATAAGAAGACGAGAATTGAAATCATCTTCCACCTGCAAAATGGCTGCCGTACGTGGACATCAATATTTCAGCCTGCGCTGGAATAACTATCAGAACACAATGACCTCAGTGTTTCAACAGTTGCGCGAGGATCTATCCTTTGTCGATGTGACCTTGTCCTGTGAGCACGGTTCCCTCAAGGCGCACAAGGTTGTGCTGTCCGCCTGTTCAACGTAtttccaaaagcttttgctCGAGAACCCATGCAAACACCCCACAATCATTCTGCCTGCTGATATCATATTCACAGATCTGAAAACAATCATCGATTTTGTTTATCGCGGTGAAATCGATGTCACCGAATCGGAATTACAGGGTCTGCTACGCACCGCCGAACAACTGAAAATCAAAGGCCTTTGCGAGACAGCTGAGAATGCGGATGATCTGAACGATGCGGCCACTGCAACAATAACTGTATCAGAGAACATACAACAGTCTGTTGTGGGCAATATTGTGAATGCGAACATAGTGCCGGGAGCACCGTCACCCACAGtcgagcaacagcagcagcatcagcaagcTCAGCAGGACCAACAGCAGGTGCATgctcagcagcaacagcagcaacaacaaatcaacGCGGCTCTGTTATCACAACACGGCGTATCCAATAGTAACGTTGCCCTGAGCGGTCAACTGCTGAGCACATcgagcggcagcagcagcagtagcggTGCTGGCCAACTGCAGGCACAGCAGCAGACACAGTCCGCTGGTCTACAGCCCACGCTACGCAAGTCGCGCCTCAAGCGCTCTAAGTCGCCAGATCTGCAGCACCATCCGCAGACTATACTTATCCAGGGACAAAATCAAACGTCCATTGTGAGTCTGCAGCAGACGGTCGACGGGAATTATATACCAGTCGGAGGCAACGGCGACGACTCGGACGTGGATCAAGAGCACGAACACATTGACGAGCACGATCACGATCACGATCACGATAGTAAGCCAGGGAAGATCTGCAAGACAGAGCACTCGGTGGCCTCACCAGCGTCCAACTCATCAACCGCCTCGAACAATGCAGCGGGTGTGAGCGGCGTGACAGCAGCAGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACggaaaagatacaaaaaatatgaCTAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGCCCATGGGCTTCCTGGATTTCACACCCGAGCCACCAGCACCATCTGCCACACCAGTCACCGTAACGGAACATGTCGACCTCTCGTGCAATCCGAGTACGGATACGCGAGATTTATCAAATCCCACCGAAGCGCTCGACATTGACAATCACCTGGCGCAACAAATCCATCGGCTTGATCAATCTCCCATGCATTCGATAGGCCATCATCACACTGGCGATGAGAGCAACTCTCAGCTAGTGCAGCACATCAAAAGTGAGGTGATCGAGGCTAAACATTTGGCGGCTGCCCAGCAACATGCTCATGTCCAGGCCCAACAACATGTCCATCATCAAGcccatcagcagcaacagcatctCCACAACCAGCAACTGCTggctcagcagcagcaacagcagcagcagcagcatcatcagcagcaacagcaaagtGTGCATGCACAGCATGGAGGTCATGTGACGCATGCGGAGATTGGTGGGGCTACAGTCATGGAGATTGATCCGAGTCAAATAAAGCATGAGCCAGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCGTCTGGTCATATGGACATGTACAACTCGGATACGAGCGAGGACTCCATGATGATCGCTAATGGCTCACCGCACGATCAAAAGGAGCCGCACTATACGAATTTGGATCAGCAACACGGCCTGGGTGGCAGCGTTTGCGGCCCTGGCCCAGGTGGTGCTGGTGGTGGCATTGGTGGTGGGGCTGGCTCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATCCCCTCGACCACGCTGTGGCAACGGGCTCACCGTTTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAATCATGGAATGAAGATGCATTACAGAATGCCTTGGAGGCATTGCGATCGGGtcagatatccgcgaataaagCATCGAAAGCCTTTGGCATACCCTCATCGACGCTGTACAAGATAGCGCGTCGGGAGGGCATCCGTTTGGCTGCACCATTTAATGCCGCCCCAACCACGTGGACACCCGAGGACTTGGAGCGTGCATTGGAGGCAATTCGAGCGGGTAATACGTCTGTACAGAAAGCGAGTGCCGAGTTTGGCATACCCACAGGAACACTATACGGACGCTGCAAACGCGAGGGCATTGAACTGTCGCGGTCGAATCCCACACCATGGTCCGAAGATGCCATGAATGAGGCCTTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAATCAAGCGGCGATACACTATAACCTGCCCTATAGCTCGCTGTATGGCCGCTTCAAACGTGGCAAATACGATGTGGTGGCGAATACAAGTGGAGTGGCGCTAATGAATACCTCAGGCAACACAACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGTTGCATATGTTGCAGCAACAGTTCCCGTACAGTCCATCGCCGCATCCTCCGCCCACACCGCAGCATCATAGTACACCGCAGCATCACAGCTCCTCGCAAGGGCCGCCAACGCCGCATATGCAACAGCATGTGGTTCacatgcaacagcagcaacaatcgCCACATCAGGGTCATCACCAGCAGCAGCATATGCAACAGGATGTGGTCACATCGAGTAGCCAAGTGGTTCATAGCcagcaacagcatcaacaacagcaacagcagcagcagcaacttcaACAGATTTATCAGCATCATGGTACGCCCGAGCGTAGTTGA
- Protein Sequence
- MAFFSAYALQSGSSRSSIDSLEPPNNHIRRRELKSSSTCKMAAVRGHQYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHPTIILPADIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQSVVGNIVNANIVPGAPSPTVEQQQQHQQAQQDQQQVHAQQQQQQQQINAALLSQHGVSNSNVALSGQLLSTSSGSSSSSGAGQLQAQQQTQSAGLQPTLRKSRLKRSKSPDLQHHPQTILIQGQNQTSIVSLQQTVDGNYIPVGGNGDDSDVDQEHEHIDEHDHDHDHDSKPGKICKTEHSVASPASNSSTASNNAAGVSGVTAAGQAIVTQIVVARDGKDTKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEALDIDNHLAQQIHRLDQSPMHSIGHHHTGDESNSQLVQHIKSEVIEAKHLAAAQQHAHVQAQQHVHHQAHQQQQHLHNQQLLAQQQQQQQQQHHQQQQQSVHAQHGGHVTHAEIGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGLGGSVCGPGPGGAGGGIGGGAGSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVALMNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPPTPQHHSTPQHHSSSQGPPTPHMQQHVVHMQQQQQSPHQGHHQQQHMQQDVVTSSSQVVHSQQQHQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00619072;
- 90% Identity
- iTF_00917120;
- 80% Identity
- iTF_00918241;