Dpro004471.3
Basic Information
- Insect
- Drosophila prostipennis
- Gene Symbol
- -
- Assembly
- GCA_037075205.1
- Location
- JBAMCJ010001713.1:1718802-1723612[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.1e-10 2.8e-07 30.4 0.0 7 40 628 662 627 665 0.87 2 4 9.5e-14 1.3e-10 41.1 0.1 2 39 677 714 676 717 0.94 3 4 2.2e-17 2.9e-14 52.7 0.0 1 45 731 776 731 776 0.98 4 4 2.1e-19 2.8e-16 59.2 0.0 1 43 783 826 783 827 0.96
Sequence Information
- Coding Sequence
- ATGACTAATAGCATTTTCCCCTCCTTTTTTTTACAGGGCCTCTTGCGCACCGCCGAGCAGCTAAAGATCAAAGGCCTCTGCGAAACCGCCGAGAATGCGGATGACCTGAACGACGCGGCCACAGCAACGATCACAGTTTCAGAGAACATTCAGCAGGCGGTCGTTGGTAATATTGTAAACGCCACCATAGTTCCCGGAGCTCCATCGCCCTCcttggagcagcagcagcagcagcaacaccaccagcaacagcaggcacaggagcagcaccagcaacagcaggtgcatgcccagcagcaacagcagcagcagcaaatcaACGCTGCCCTGTTGACGCAACACGGAGTGCCCAGCGGAAGTGTTTCCCTATCCGGGCAATTGCTTAGCTCCTCggccagcggcagcagcggaaGTTCAGCCGGCGGACAGCAGGCTCCACAGACGCCATCCGGTTTGCAGCCGACGCCACGCAAGTCGCGACTAAAGCGCTCCAAGTCACCGGACCTGCCATCGGGCGGCGGAGCAGGAAGCTCTGGAGGCTCGAGTAGCAGCTCGTCGCAGCAGCAACCGCAGCCggcgcaccaccaccacccgcAGACCATTCTCATCCAGGGCCAAAATCCGAACTCCATTGTGAGCCTTCAGCAGACGGCCGACGGCAATTATATACCAGTGTCAGGAACAGGCGACGATTCAGACGCCGAGGACCACGATCACGACCACGAGCACGAACACGGACACGGACACGGGCACGGAGGACATCCGCACGGACACGGTCACAGCCACGATCACAGCCACGATCACGAGCACGAGAACAAGCCGAATAAGATCTGCAAGACCGAGCAATCGGTGGCCTCGCCGGCGTCCAATTCATCCAGCGCCTCGAACAATGCAGCGGGCGTGAGCGGCGTGACCTCCACCGGCCAAGCCATCGTCACACAAATTGTAGTAGCGCGCGACGGAAAAGATTCAAAAAATATGACTAGTTTAGGCATGGGCATGAACGGCGGCCTGTTGGGCGTGCCCATGGGATTCCTGGACTTCACACCCGAGCCACCAGCACCATCTGCCACCCCAGTCACCGTTACGGAGCACGTCGATCTGTCCTGCAACCCCAGCACGGACACGCGCGATCTATCAAATCCCACCGAACCGCTCGATATAGACAATCATCTGGCTCAGCAGATCCATCGGCTCGATCAGTCCCCCATGCACTCGATATCGCATCACCATACAGGCGATGAAAGCAACTCGAATCTGGTGCAGCACATCAAAAGCGAGGTGATCGAGGCCAAGCACCTGGCAGCTGCCCAGCAGCATGCACTTAGCCaggcccagcagcaacatgcccATCACCAggcccaccagcagcagcagcaccaacaacaccagcaacagcagcagcaacaacagcagcagcagcagcaacatctccATGCACAGCAGCTGTTGGCCCAGAgtcagttgcagcagcagcagcaacagcagcagcagcaacaccaccagcagcaacaacaggcaGCTcaagccgcagcagcagctggggTGCATGGCCAGCATGGGGGACATGTGACGCATGCCGATATCGGCGGAGCCACAGTCATGGAGATTGATCCGAGCCAGATTAAACACGAGCCGGGCATGATAATAACGCCAGAGATTGTCAACATGATGTCCTCAGGACATATGGACATGTACAATTCGGACACGAGCGAGGATTCGATGATGATCGCCAACGGTTCGCCGCACGATCAGAAGGAGCCGCACTACACGAATTTGGATCAGCAGCACGGCATGGGTGGCAGCGTTTGCGGCCCGGGGCCCGGcggtgctggtggtggtgggggcATGAGTGGTGGGGCTGGCTCTGGCTCTGGCGAGAAAGCTTTAGATGCATTAAAGAACCAAAACATGAGCCTGACGAAAGCGTCCTCCATTTATGGCATCCCATCGACCACCCTGTGGCAACGTGCTCATCGCCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCGTGGAACGAGGATGCCCTGCAGAATGCCTTGGAGGCGCTGCGTTCGGGTCAGATATCCGCGAACAAAGCATCAAAGGCCTTTGGCATCCCCTCCTCGACGCTCTACAAGATTGCCCGGCGCGAGGGCATCCGCCTTGCGGCGCCCTTCAATGCCGCCCCAACCACGTGGACGCCCGAGGATCTGGAGCGTGCCTTGGAGGCGATACGGGCGGGTAATACATCGGTGCAGAAGGCCAGCGCTGAGTTTGGCATACCCACAGGAACACTTTACGGACGCTGCAAACGGGAGGGCATTGAGCTGTCGCGTTCGAATCCAACGCCCTGGTCCGAGGATGCCATGAACGAGGCCCTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAACCAGGCGGCCATTCACTATAACCTGCCCTACAGCTCGCTCTACGGCCGCTTCAAGCGCGGCAAGTACGACGTGGCGGCCAACACGAGTGGCGTGGCGCTGCTCAACACCTCGGGCAACACCACTGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAATTCGtTGCATATGTTACAGCAACAGTTCCCGTACAGCCCGTCGCCGCATCCGCAAACGCCGCAGCACCACAGCACGCCGCAGCATCACAGTACACCGCAGCAGGGACCGCCGACGCCCCAGCACATGCAGCAACACGTAGTTCacatgcaacagcagcagtcgCCCCATCCAGGCCATCATCCGCAGCACATGCAGCAGGATGTGGTTACATCGAGCAGTCAGGTGGTGcacagccagcagcagcagcagcttcagCAGATCTATCAGCACCACGGGACGCCGGAGCGTAGTTGA
- Protein Sequence
- MTNSIFPSFFLQGLLRTAEQLKIKGLCETAENADDLNDAATATITVSENIQQAVVGNIVNATIVPGAPSPSLEQQQQQQHHQQQQAQEQHQQQQVHAQQQQQQQQINAALLTQHGVPSGSVSLSGQLLSSSASGSSGSSAGGQQAPQTPSGLQPTPRKSRLKRSKSPDLPSGGGAGSSGGSSSSSSQQQPQPAHHHHPQTILIQGQNPNSIVSLQQTADGNYIPVSGTGDDSDAEDHDHDHEHEHGHGHGHGGHPHGHGHSHDHSHDHEHENKPNKICKTEQSVASPASNSSSASNNAAGVSGVTSTGQAIVTQIVVARDGKDSKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTGDESNSNLVQHIKSEVIEAKHLAAAQQHALSQAQQQHAHHQAHQQQQHQQHQQQQQQQQQQQQQHLHAQQLLAQSQLQQQQQQQQQQHHQQQQQAAQAAAAAGVHGQHGGHVTHADIGGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNLDQQHGMGGSVCGPGPGGAGGGGGMSGGAGSGSGEKALDALKNQNMSLTKASSIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVAANTSGVALLNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPQTPQHHSTPQHHSTPQQGPPTPQHMQQHVVHMQQQQSPHPGHHPQHMQQDVVTSSSQVVHSQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00619072;
- 90% Identity
- iTF_00536684; iTF_00505486; iTF_00505323; iTF_00591790; iTF_00591620; iTF_00547984; iTF_00581452; iTF_00592313; iTF_00592469; iTF_00602681; iTF_00602502; iTF_00604763; iTF_00604931; iTF_00539580; iTF_00539737; iTF_00504606; iTF_00596736; iTF_00596569; iTF_00619072; iTF_00619229;
- 80% Identity
- -