Tcor009570.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trachymyrmex cornetzi
Gene Symbol
nfxl1
Assembly
GCA_001594075.1
Location
NW:373802-377158[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 1.1 6.5e+03 -3.3 1.1 15 19 133 137 132 137 0.81
2 18 0.087 5.2e+02 0.2 0.5 4 10 168 174 167 174 0.95
3 18 5.7e-08 0.00034 20.0 15.1 1 18 182 198 182 199 0.98
4 18 1.4e-07 0.00086 18.7 11.8 1 18 236 252 236 253 0.94
5 18 1.5 9.2e+03 -3.8 1.7 6 10 278 282 278 282 0.93
6 18 2.2e-05 0.13 11.8 11.3 1 19 288 307 288 307 0.93
7 18 0.00065 3.9 7.0 7.2 1 18 343 360 343 361 0.96
8 18 0.007 42 3.7 7.6 1 12 395 406 395 406 0.94
9 18 0.87 5.2e+03 -3.0 1.0 6 10 416 420 415 420 0.91
10 18 9.1e-08 0.00054 19.3 12.9 1 19 426 444 426 444 0.91
11 18 1.6 9.7e+03 -3.8 0.6 9 12 472 475 472 475 0.77
12 18 0.00011 0.63 9.6 9.8 9 19 492 502 490 502 0.90
13 18 0.0019 11 5.6 7.4 1 12 512 522 512 522 0.95
14 18 0.87 5.2e+03 -3.0 5.8 14 18 554 558 554 559 0.89
15 18 0.0022 13 5.3 8.6 1 12 595 606 585 606 0.80
16 18 2 1.2e+04 -5.6 3.4 14 18 619 623 619 627 0.59
17 18 0.00016 0.93 9.0 18.2 3 19 636 652 635 652 0.92
18 18 0.00044 2.6 7.6 14.5 1 16 697 711 697 717 0.93

Sequence Information

Coding Sequence
atgaaatttcagAGTTTCAAGATGCAGAAATTTAAGAAGGCTCAAGCACAGAATAAACTGTCTATTGAAAAGCACTTGGAAGCCAATGCATTGTTGAATTCGTCTAGTGAAGATGAGGATGAAACTAACGAAGAAGATGTCCAAAATGTGGTGGGCAAAGTATTGTTAGCGTACCAAGGACAGAGCACAGATGCCGAAAAAGTGATATCGTACTTGGTGAATTCCTTTCAAACCAGCAGTGCTGTTTGTTTGATATGTATATCCACTGTCAAGAAGATAGATCCAATATGGAACTGCGACAAGTGCTACGCATTTCTACACATGTCTTGCATCTTACACTGGATCAACGACAGTTTGAGCTGCAAACGGGCTAAAGGAATCACACCGATCTGGGCCTGTCCAAAATGCCGTATGGAATATGATCAGGATCAGATTCCAAGATTGTACAAATGCTTCTGTAAAAAGTCGATAGATCCTCAGTATCAACCATGGATTATTCCGCATTCTTGCGGTGAACCCTGCGGCAAGCTTTTACAACCAGAGTGCGGTCACAAATGTGTGTTGCTTTGCCATCCTGGTCCATGTCCACCCTGCGCTAAGATGGTATCTGTTAAATGTTATTGTGGCAAGCTACCGGCGCAACCGCGACGTTGCAATGCTAAAAACTGGAGTTGCGGAactatatgcaataaaaaatatgaattttgttCACACACTTGTGATAATGTGTGTCATACTGGAGAATGTTCCCCTTGTGTAGAAACAGTAGTATTGAAATGCCATTGTAAGAGTAACGAGAAAGTAGGGAAATGCTACGAGGGTATATGGATTTGCGAAAAACCTTGCAATAGGAAATTCTCTTGTAACGTACATAGCTGTGAAAGCACTTGTCATCTACCCGGCGATTGCAGCAACTGCCCCCTGGAAAAGAACAGACATTGTCCTTGTGGAAAAAAACGATACGAAATTTCTTGCAGGCGGCAGCAAGTGCCAACGTGTGGGGATACGTGCGGCAAGTTGTTGGACTGCGGATCGCACTTCTGCAATATGAGATGCCATATCGATCGCTGTGGTCAATGCTTAGAAGTCGTAACAAAAGCGTGTAGATGCGGTAGTTACACGAAAGAGATTGCCTGCGCAAAAGAGTTCCACTGCAACAAGAAATGCATGCAAATGCGCTTATGCGGTAGACATTTGTGCAACAAAAAATGCTGCGACTGCATATCGAAGAACACGTCCAATCATTGTGAAAAAACGTGCGAGAATACGCTCAACTGTCGTAAGCACAAATGCGCTGCACCTTGTCACAGTGGTCCTTGCTATCCATGTACCAGAACGGACACTATACAGTGTCGATGTGGCAGCAGCAAGATAACGGTGCCATGTGGTACCAGAAAGAGAATCAAGCCACCACCATGCCACAAATCTTGCAAAATCCCACCTATCTGCCATCACAGCAAGAGAGAAACACACAAATGTCATCAAGGCCCATGTCCACCATGTAAAAAGGTCTGCGGTTTGACTCACAAGAGATGCGGTCACTCTTGCCCAGCCACTTGTCACACCAAAGTCTGGATGAAAATTAGAGCGAACGGAGTAAAGGCGCAGCCTATTGGACCCTGGGAAAAACCAAAGGATATTATGGAACTGAAGACTTTGCCATGTCCACCGTGCGAGGTTTCCGTGTCTGTGACTTGTCTCGGTGGTCACGAAACGCGCCCTTGGTCATGTCACATGTCGAAACCAAGCTCCTGCGGTAGACTTTGCGGCCAGCTATTACCATGCAAGAATCACACTTGCGAGTTGACTTGTCACAAACTACAGACTTCTGACAACGAGTCCAACAACGGTATTCCGTGCATGGAATGCGAGAAGGAGTGTAGTTTCGCACGACCGTCTGGTTGTACGCACACGTGTCCGCAACCTTGTCACCCAGCGCCATGTAAACCGTGTAAACAATTAGTGCGAGTCTCTTGCCATTGCGGTATTAGCACCCTTTACCGGCATTGCGTGAACTTGACGTCTGCAACGAGCAAGGAACGGGATGAGTTACTCAAATGCGGGAATCAATGtccaaaaaattatcGATGCGGCCACCGTTGTATCAATGATTGTCATCCAGGAGAATGTAAAGGCGGAGAAGGATGCAGCAAGAAAGTCAGATTATGGTGTAAATGTAAACGAATCAAAAAGGATTTTCTTTGTTCACTTCTTCAAAAGGAGCAGATTACCGTAGCATGCGATAGCGTATGTGAATCACTgaaaaatgagagaaaagaGGCTCAAGAGGCTATGATAGCGAAAAAGCTGGAAGAGGAGGAACTGCGTAATCGAGAGGAGATTGAAAAATTCGAGAAAAAGTTCAAGCCACGACGAAAGAGGAAGGACAAATACGAGAACTCGAAACAATCCAAAGAAAACGCGAGAAATAAGTGTCACATTGCATGGATTTTAGCGATTATCGTAAGCATTATAGgaataataatagtttatatgACCGTTCCTGATTTAAGTATACCTGGATTGAGCTGA
Protein Sequence
MKFQSFKMQKFKKAQAQNKLSIEKHLEANALLNSSSEDEDETNEEDVQNVVGKVLLAYQGQSTDAEKVISYLVNSFQTSSAVCLICISTVKKIDPIWNCDKCYAFLHMSCILHWINDSLSCKRAKGITPIWACPKCRMEYDQDQIPRLYKCFCKKSIDPQYQPWIIPHSCGEPCGKLLQPECGHKCVLLCHPGPCPPCAKMVSVKCYCGKLPAQPRRCNAKNWSCGTICNKKYEFCSHTCDNVCHTGECSPCVETVVLKCHCKSNEKVGKCYEGIWICEKPCNRKFSCNVHSCESTCHLPGDCSNCPLEKNRHCPCGKKRYEISCRRQQVPTCGDTCGKLLDCGSHFCNMRCHIDRCGQCLEVVTKACRCGSYTKEIACAKEFHCNKKCMQMRLCGRHLCNKKCCDCISKNTSNHCEKTCENTLNCRKHKCAAPCHSGPCYPCTRTDTIQCRCGSSKITVPCGTRKRIKPPPCHKSCKIPPICHHSKRETHKCHQGPCPPCKKVCGLTHKRCGHSCPATCHTKVWMKIRANGVKAQPIGPWEKPKDIMELKTLPCPPCEVSVSVTCLGGHETRPWSCHMSKPSSCGRLCGQLLPCKNHTCELTCHKLQTSDNESNNGIPCMECEKECSFARPSGCTHTCPQPCHPAPCKPCKQLVRVSCHCGISTLYRHCVNLTSATSKERDELLKCGNQCPKNYRCGHRCINDCHPGECKGGEGCSKKVRLWCKCKRIKKDFLCSLLQKEQITVACDSVCESLKNERKEAQEAMIAKKLEEEELRNREEIEKFEKKFKPRRKRKDKYENSKQSKENARNKCHIAWILAIIVSIIGIIIVYMTVPDLSIPGLS