Hsub020402.1
Basic Information
- Insect
- Harpagoxenus sublaevis
- Gene Symbol
- nfxl1
- Assembly
- GCA_030770355.1
- Location
- JASTWR010000216.1:225103-228147[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 1.1 2.6e+04 -3.2 1.1 15 19 126 130 125 130 0.81 2 18 0.42 1e+04 -1.9 0.6 4 10 161 167 161 167 0.93 3 18 5.6e-08 0.0014 20.0 15.1 1 18 175 191 175 192 0.98 4 18 9.7e-07 0.023 16.1 10.9 4 18 231 245 229 246 0.94 5 18 1.5 3.7e+04 -3.7 1.7 6 10 271 275 271 275 0.93 6 18 1.5e-05 0.36 12.3 12.3 1 19 281 300 281 300 0.93 7 18 0.00014 3.4 9.2 8.3 1 18 336 353 336 354 0.97 8 18 0.0069 1.7e+02 3.8 7.6 1 12 388 399 388 399 0.94 9 18 1.2 2.8e+04 -3.4 1.4 6 10 409 413 408 413 0.88 10 18 4.2e-07 0.01 17.2 13.6 1 19 419 437 419 437 0.91 11 18 7.5e-05 1.8 10.0 8.6 9 19 485 495 483 495 0.90 12 18 0.0018 45 5.6 7.4 1 12 505 515 505 515 0.95 13 18 0.86 2.1e+04 -2.9 5.8 14 18 547 551 547 552 0.89 14 18 0.0019 45 5.6 8.2 1 12 588 599 578 599 0.80 15 18 2 4.8e+04 -5.6 3.5 15 18 613 616 612 620 0.53 16 18 0.00019 4.7 8.7 17.9 3 19 629 645 628 645 0.92 17 18 0.0025 60 5.2 14.8 1 16 690 704 690 710 0.93 18 18 1.4 3.4e+04 -3.6 0.6 6 10 740 744 739 744 0.86
Sequence Information
- Coding Sequence
- ATGCAGAAATTTAAAAGAGCTCAAGCACAGAATAAACTGTCTATCGAAAGGCACTTGGAAGCCAACGCGTCGTTGAATTCTTCCAGCGAGGAAGAGGATGAAGCAAATGAGGAGGATGTCCAAAATGTGGTGGGCAAAGTATTGTCGGCGTACCAGGGGCAGAGCACGGATGCGGAGAAAGTGATAACCTACCTGGTTAATTCCTTTCAGACCAGCAGCGCTGTTTGTTTGATATGTATATCAACTGTCAAGAAAACAGATCCAATATGGAACTGCGACAAATGCTATGCATTTTTACACATATCCTGCATTCTACACTGGATCAACGACAGTTTGAGCTACAAACGGGCCAAAGGGATTACCCCGATTTGGGCATGTCCAAAATGCCGTATGGAATACGATCAGGACCAGATTCCAAGATCGTACAAATGCTTCTGTAAGAAGACTGTGGATCCTCTGCACCAACCCTGGGTTATTCCACATTCCTGCGGTGAAGCATGCGGCAAACTTCTGCAACCAGAATGCGGTCACAAGTGCGTGTTGCTCTGCCATCCTGGTCCGTGTCCACCCTGTGCCAAGATGGTGTCGGTTAAATGTTACTGCGGCAAACTACCGGCACAACCGCGACGTTGTAATGCTAAAAACTGGAGCTGCGGAACTGTGTGCAACCAAAAATATGAATCTTGTGTACACAGTTGCAATAGCCTGTGTCACACTGGAGAATGTTCCCCTTGTGTAGAAATAGTATTGCTGAAATGCCGTTGTAAGAGTAACGAGAAGACAGGGAAGTGCTACGAGGGCACGTGGATTTGTGAGAAACCTTGTAACAGGAGATTTTCTTGTAACGTACATAGCTGCGAGAGCACTTGCCATCTACCCGGCGACTGCGGCAACTGTCCCCTTGAAAAGAACAGATGCTGTCCTTGCGGAAAGAAACGATACGAAGTCTCTTGCAGGCGGCAGCAAGTGCCAACGTGCGGTGATACGTGCGGCAAGTTGTTGGACTGCGGGTCGCACTTCTGCAACATGAGATGCCATACCGATCGCTGCGGTCAGTGCTTGGAAGTCGTAATGAAAGCGTGCAGATGCGGCAGTTACATGAAAGAGATCGCCTGCGCGAAGGAGTTCCACTGCAACAAGAAATGCATGCAAATGCGCTTATGTGGTAGACATTTGTGCAACAAGAAATGCTGCGACTGCATAACGAAGAACACGTCCAATCCATGTGAGAAAACGTGCGAGAACACGCTCAACTGCCGTAAGCACAAATGCGCCACGCCTTGCCACAGCGGTCCTTGCTATCCATGCACCAGAACAGACGTCATACAGTGTCGATGCGGCAGCAGCAAGATAACAGTGCCATGCGGTACCAGAAAGAGAATCAAGCCACCGCCGTGCAATAAATCCTGCAAGATTCCACCTATCTGCCACCACAGCAAGAGGGAAACGCACAAGTGTCATCAAGGTCCATGCCAACCGTGTAAAAAGGTCTGCGGATTAACGCACAAGAGATGCGGTCACTCTTGCCCGGCCACTTGTCACACCAAAGTCTGGGTGAAGAGTAAAGCGAACGGAATAAAGGCGCAGCCTATTGGACTCTGGGAGAAACCGAAGGACATTATGGAGCTGAAGACTTTACCATGTCCACCGTGCGAAGTTTCTGTGCCTGTGACCTGTCTTGGTGGTCACGAAACGCGCCCTTGGCCGTGTCACATGTCGAAACCGAACTCCTGCGGCAGACTTTGCGGCCAGCTACTGCCATGCAAGAATCACACCTGCGAATTGATTTGTCACAAGCTACAAACTTCCAACGACGAATCCAACAGCGGTACTCCGTGCATGGAATGCGAGGAGGAATGCAATTTCGCACGACCGTCAGGTTGTACGCACACGTGCCCGAAACCTTGTCACCCAGCGCCATGTAAACCATGCAAGCAATTGGTGCGAATCTCTTGTCATTGCGGCATTAGCACCCTATACCGGCATTGTGTAAACCTGACATCCGTAACGAGTAAGGAACGGGACGAGTTACTCAAATGTGGAAACCAATGTCCAAAAAATTACTCATGTGGCCACCGTTGCGTCAATGATTGTCATCCAGGAGAGTGTAAAGGTGGAGAGGGATGCAGCAAGAAAGTTAGATTATGGTGTAAGTGTAAACGGATCAAGAAGGATTTTCTCTGTTCGCTTCTTCAAAAGGAGCAGATCACCGTAGAATGCGATAGCGTGTGCGAATCATTGAAGAATGAAAGAAAGGAAGCTCAGGAAGCTATGATGGCGAAGAAACTAAAAGAGGAGGAACTGCGCAATCGGGAAGAGATTGAGAAGTTCGAGAAGAAGTTCAAGCCACGACGAAAAAAGAAGGATAAGTACGAGAGCTCGGAACAGTCCCAACAAAATGCAAGGAATAAGTATCGCAGTTTATGGAGTTTAGCAATTATCGTAAGCATTATAGGGATAATAATAGTGTATGTGACTGTTCCTGACTTAAGAATACCAGTATTGAGTTGA
- Protein Sequence
- MQKFKRAQAQNKLSIERHLEANASLNSSSEEEDEANEEDVQNVVGKVLSAYQGQSTDAEKVITYLVNSFQTSSAVCLICISTVKKTDPIWNCDKCYAFLHISCILHWINDSLSYKRAKGITPIWACPKCRMEYDQDQIPRSYKCFCKKTVDPLHQPWVIPHSCGEACGKLLQPECGHKCVLLCHPGPCPPCAKMVSVKCYCGKLPAQPRRCNAKNWSCGTVCNQKYESCVHSCNSLCHTGECSPCVEIVLLKCRCKSNEKTGKCYEGTWICEKPCNRRFSCNVHSCESTCHLPGDCGNCPLEKNRCCPCGKKRYEVSCRRQQVPTCGDTCGKLLDCGSHFCNMRCHTDRCGQCLEVVMKACRCGSYMKEIACAKEFHCNKKCMQMRLCGRHLCNKKCCDCITKNTSNPCEKTCENTLNCRKHKCATPCHSGPCYPCTRTDVIQCRCGSSKITVPCGTRKRIKPPPCNKSCKIPPICHHSKRETHKCHQGPCQPCKKVCGLTHKRCGHSCPATCHTKVWVKSKANGIKAQPIGLWEKPKDIMELKTLPCPPCEVSVPVTCLGGHETRPWPCHMSKPNSCGRLCGQLLPCKNHTCELICHKLQTSNDESNSGTPCMECEEECNFARPSGCTHTCPKPCHPAPCKPCKQLVRISCHCGISTLYRHCVNLTSVTSKERDELLKCGNQCPKNYSCGHRCVNDCHPGECKGGEGCSKKVRLWCKCKRIKKDFLCSLLQKEQITVECDSVCESLKNERKEAQEAMMAKKLKEEELRNREEIEKFEKKFKPRRKKKDKYESSEQSQQNARNKYRSLWSLAIIVSIIGIIIVYVTVPDLRIPVLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01476621;
- 90% Identity
- iTF_01476621;
- 80% Identity
- -